Csa3G217160 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G217160
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionrRNA N-glycosidase; contains IPR000772 (Ricin B lectin domain)
LocationChr3 : 14464105 .. 14465154 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAGTCGAATTAAAGTAATCAAAGGATGAAAGAAATCGTGTTGAGCATCATTGTAGCCTTCTCACTCACCACCCAACTTGTCATCGCAGTGCCCCCCAACTATGGATATGGAGTTGGATATGGAGGCGTCCCTGGAGCCACACATCTTGTGGGTCGAGATGGATTGTGTTTAGAGATGTCTCCATGGTACAAACCTGCAGGTATTAATTTTCCAACTCGATTATCACCATGTGACGAGAAGAAACAAACTCAATTATGGACGATTGTCGGAGATGGCACAATTCGACCCATGAATGATAAATTTTGCTTGGCTGCTGAAGTTTTTTATGGGGTCATAAATAAAGCAGTAGTAAGTGAGTGTGGTAAAGTATCAGATCCTAACAAGAAATGGACCCAGAAGAATGACGGAACCATAGCCCTCGTCGATTCAAGAATGGTTCTAACAGGAGATTTAGACTATGTGACATTGCAAAGTAACAAATATACACCATCACAAAGTTGGGAAGTCACGGAAAGTTTAAACTCAATGGTTGCAAACATCGAATGGCTTAACAACTTGTGTTTGCAATCCACAGACGATTCAAGTCATGTGGGATTGAATGGATGTAATACAGACAATAAGTACCAAAGATGGGCATTGTATGCAGATGGAACCATTCGACAACATGTGAACAAAAACTATTGCTTGACTTCTGACCAAGATTTTGGTCGCTTTGTAGTTGTGTCTAAATGTGAAGACAAACCGCAACAACGTTGGAGTCTTGATGCTAAAGACTATACTATTGACCATCCCAACACTGACATGGTCCTAGATGTGTTTAGTGTGCCTGATTCTACTTTTCCGTCAGTACTCGTTACGAACCGTCGTGATGGAAGTGCTAGCCAAAGATGGACTATTATTAACTAATGAATCAGATAAATAAGATAGGGGAGATGTGAATCCACACGAACTCATGCATGCAAATGCCTTTCTACTTCTTTAACTCTCTTTCTAATGCTTAATGTATGAACATCAATAAATTAATAAGATAAGTGTGGATTTATGTGTTT

mRNA sequence

ATGAAAGAAATCGTGTTGAGCATCATTGTAGCCTTCTCACTCACCACCCAACTTGTCATCGCAGTGCCCCCCAACTATGGATATGGAGTTGGATATGGAGGCGTCCCTGGAGCCACACATCTTGTGGGTCGAGATGGATTGTGTTTAGAGATGTCTCCATGGTACAAACCTGCAGGTATTAATTTTCCAACTCGATTATCACCATGTGACGAGAAGAAACAAACTCAATTATGGACGATTGTCGGAGATGGCACAATTCGACCCATGAATGATAAATTTTGCTTGGCTGCTGAAGTTTTTTATGGGGTCATAAATAAAGCAGTAGTAAGTGAGTGTGGTAAAGTATCAGATCCTAACAAGAAATGGACCCAGAAGAATGACGGAACCATAGCCCTCGTCGATTCAAGAATGGTTCTAACAGGAGATTTAGACTATGTGACATTGCAAAGTAACAAATATACACCATCACAAAGTTGGGAAGTCACGGAAAGTTTAAACTCAATGGTTGCAAACATCGAATGGCTTAACAACTTGTGTTTGCAATCCACAGACGATTCAAGTCATGTGGGATTGAATGGATGTAATACAGACAATAAGTACCAAAGATGGGCATTGTATGCAGATGGAACCATTCGACAACATGTGAACAAAAACTATTGCTTGACTTCTGACCAAGATTTTGGTCGCTTTGTAGTTGTGTCTAAATGTGAAGACAAACCGCAACAACGTTGGAGTCTTGATGCTAAAGACTATACTATTGACCATCCCAACACTGACATGGTCCTAGATGTGTTTAGTGTGCCTGATTCTACTTTTCCGTCAGTACTCGTTACGAACCGTCGTGATGGAAGTGCTAGCCAAAGATGGACTATTATTAACTAA

Coding sequence (CDS)

ATGAAAGAAATCGTGTTGAGCATCATTGTAGCCTTCTCACTCACCACCCAACTTGTCATCGCAGTGCCCCCCAACTATGGATATGGAGTTGGATATGGAGGCGTCCCTGGAGCCACACATCTTGTGGGTCGAGATGGATTGTGTTTAGAGATGTCTCCATGGTACAAACCTGCAGGTATTAATTTTCCAACTCGATTATCACCATGTGACGAGAAGAAACAAACTCAATTATGGACGATTGTCGGAGATGGCACAATTCGACCCATGAATGATAAATTTTGCTTGGCTGCTGAAGTTTTTTATGGGGTCATAAATAAAGCAGTAGTAAGTGAGTGTGGTAAAGTATCAGATCCTAACAAGAAATGGACCCAGAAGAATGACGGAACCATAGCCCTCGTCGATTCAAGAATGGTTCTAACAGGAGATTTAGACTATGTGACATTGCAAAGTAACAAATATACACCATCACAAAGTTGGGAAGTCACGGAAAGTTTAAACTCAATGGTTGCAAACATCGAATGGCTTAACAACTTGTGTTTGCAATCCACAGACGATTCAAGTCATGTGGGATTGAATGGATGTAATACAGACAATAAGTACCAAAGATGGGCATTGTATGCAGATGGAACCATTCGACAACATGTGAACAAAAACTATTGCTTGACTTCTGACCAAGATTTTGGTCGCTTTGTAGTTGTGTCTAAATGTGAAGACAAACCGCAACAACGTTGGAGTCTTGATGCTAAAGACTATACTATTGACCATCCCAACACTGACATGGTCCTAGATGTGTTTAGTGTGCCTGATTCTACTTTTCCGTCAGTACTCGTTACGAACCGTCGTGATGGAAGTGCTAGCCAAAGATGGACTATTATTAACTAA

Protein sequence

MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNKKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCEDKPQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN*
Homology
[Close]
BLAST of Csa3G217160 vs. Swiss-Prot
Match: NIGB_SAMNI (Nigrin b OS=Sambucus nigra PE=1 SV=2)

HSP 1 Score: 117.5 bits (293), Expect = 2.5e-25
Identity = 74/230 (32.17%), Postives = 116/230 (50.43%), Query Frame = 1 

Query: 40  HLVGRDGLCLEMSPWYKPAGINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEV 99
           ++VGRDGLC+++   Y   G   P +L PC  ++  Q WT   D TIR M    C+ A  
Sbjct: 311 NIVGRDGLCVDVRNGYDTDGT--PLQLWPCGTQRN-QRWTFDSDDTIRSMGK--CMTANG 370

Query: 100 FYGVINKAVVSECGKVSDPNKKWTQKNDGTIALVDSRMVLTG----DLDYVTLQSNKYTP 159
                N  V+  C   ++   KW    DG+I    S +V+T         + L+ N Y  
Sbjct: 371 LNNGSN-IVIFNCSTAAENAIKWEVPIDGSIINPSSGLVMTAPRAASRTILLLEDNIYAA 430

Query: 160 SQSWEVTESLNSMVANIEWLNNLCLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHV 219
           SQ W VT ++  +VA+I     +CLQS  +++ V +  C   +  Q+WALY D TIR + 
Sbjct: 431 SQGWTVTNNVKPIVASIVGYKEMCLQSNGENNGVWMEDCEATSLQQQWALYGDRTIRVNS 490

Query: 220 NKNYCLTSD-QDFGRFVVVSKCEDKPQQRWSLDAKDYTIDHPNTDMVLDV 265
            +  C+T++  +    +++ KC+  P QRW  ++ D  I +P +  V+DV
Sbjct: 491 TRGLCVTTNGYNSKDLIIILKCQGLPSQRWFFNS-DGAIVNPKSRHVMDV 533

[Close]
BLAST of Csa3G217160 vs. Swiss-Prot
Match: SGSL_TRIAN (Seed lectin (Fragments) OS=Trichosanthes anguina PE=1 SV=2)

HSP 1 Score: 106.7 bits (265), Expect = 4.4e-22
Identity = 77/266 (28.95%), Postives = 128/266 (48.12%), Query Frame = 1 

Query: 39  THLVGRDGLCLEMSPWYKPAGINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAE 98
           T + GRD LC++++      G      L PC ++   Q WT   DGT+R +    CLA  
Sbjct: 265 TRISGRDALCVDVAGALTSDGSRLI--LYPCGQQVN-QKWTFHSDGTVRSLGK--CLATN 324

Query: 99  VF-YGVINKAVVSECGKVSDPNKKWTQKNDGTI--------ALVDSRMVLTGDLDYVTLQ 158
              +G  N  V+ +C K++  +  W     GTI        AL  ++   + +L   T++
Sbjct: 325 NSKFG--NLVVIYDCSKLAAEDISWDVSVGGTIMNPNYEDLALTSNKATRSTNL---TME 384

Query: 159 SNKYTPSQSWEVTESLNSMVANIEWLNNLCLQSTDDSSHVGLNGCNTDNKYQRWALYADG 218
            N Y+ SQ W V   +  ++ +I  L+++CL++TD ++++ L  C  + + Q WALY+DG
Sbjct: 385 VNTYSASQGWRVGNYVQPIIGSIVGLDDMCLEATDGNTNMWLEECVPNQREQSWALYSDG 444

Query: 219 TIRQHVNKNYCLT---SDQDFGRFVVVSKCEDKPQQRWSLDAKDYTIDHP-NTDMVLDVF 278
           TIR   N+  C+T   S  D  + + +  C+    QRW   A D +I  P N  + +DV 
Sbjct: 445 TIRVDDNRELCVTASSSTYDNWKVITILNCDGSNNQRWVFLA-DGSISTPGNQRLAMDV- 504

Query: 279 SVPDSTFPSVLVTNRRDGSASQRWTI 292
                     ++ +R  G  +Q+W +
Sbjct: 505 -ARSDVDLKKIILHRPHGDLNQQWVL 517

[Close]
BLAST of Csa3G217160 vs. Swiss-Prot
Match: RIP1_SAMNI (Ribosome-inactivating protein SNAI' OS=Sambucus nigra PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.4e-20
Identity = 73/256 (28.52%), Postives = 122/256 (47.66%), Query Frame = 1 

Query: 43  GRDGLCLEMSPWYKPAGINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYG 102
           GRDG C E+    +  G   P +LS C E+   Q WT   DGTI+ +    CL       
Sbjct: 323 GRDGFCAEVKNGDEKDGT--PVQLSSCGEQSNQQ-WTFSTDGTIQSLGK--CLTTS---- 382

Query: 103 VINKAVVSECGKVSDPNKKWTQKNDGTIALVDSRMVLTG----DLDYVTLQSNKYTPSQS 162
             +  ++  C  V   + KW    DGTI    S +VLT     +   V+L+ N +   Q 
Sbjct: 383 --SSVMIYNCKVVPPESTKWVVSIDGTITNPRSGLVLTAPKAAEGTLVSLEKNVHAARQG 442

Query: 163 WEVTESLNSMVANIEWLNNLCLQSTDDSSHVGLNGCNTDNKY---QRWALYADGTIRQHV 222
           W +  ++  +V  I     +CL++   ++ V L  C+  +     Q+WALY DGTIR + 
Sbjct: 443 W-IVGNVEPLVTFIVGYEQMCLETNPGNNDVSLGDCSVKSASKVDQKWALYGDGTIRVNN 502

Query: 223 NKNYCLTSD-QDFGRFVVVSKCEDKPQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFP- 282
           +++ C+TS+ +     +++ KC     QRW  +  D TI +P++ +V+    V  +  P 
Sbjct: 503 DRSLCVTSEGKSSNEPIIILKCLGWANQRWVFNT-DGTISNPDSKLVM---HVDQNDVPL 562

Query: 283 SVLVTNRRDGSASQRW 290
             ++ +   G+++Q+W
Sbjct: 563 RKIILSHPSGTSNQQW 562

[Close]
BLAST of Csa3G217160 vs. Swiss-Prot
Match: ABRC_ABRPR (Abrin-c OS=Abrus precatorius PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.2e-20
Identity = 77/231 (33.33%), Postives = 115/231 (49.78%), Query Frame = 1 

Query: 43  GRDGLCLEMSPWYKPAGINFPTRLSPC---DEKKQTQLWTIVGDGTIRPMNDKFCLAAEV 102
           GRDG+C+++       G +   R+      D  ++ QLWT+  D TIR  N K CL  E 
Sbjct: 315 GRDGMCVDVYD----DGYHNGNRIIAWKCKDRLEENQLWTLKSDKTIRS-NGK-CLTTEG 374

Query: 103 FYGVINKAVVSECGKVSDPNKKWTQKNDGTIALVDSRMVLTGDLDYV----TLQSNKYTP 162
            Y   N  ++ +C         W   ++GTI    S +VL+ +   +    T+Q+N+Y  
Sbjct: 375 -YAPGNYVMIYDCTSAVAEATYWEIWDNGTIINPKSALVLSAESSSMGGTLTVQTNEYLM 434

Query: 163 SQSWEVTESLNSMVANIEWLNNLCLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHV 222
            Q W    + +  V +I   ++LC+Q+    S+V L  C+ + K Q+WALY DG+IR   
Sbjct: 435 RQGWRTGNNTSPFVTSISGYSDLCMQA--QGSNVWLADCDNNKKEQQWALYTDGSIRSVQ 494

Query: 223 NKNYCLTS-DQDFGRFVVVSKCEDK-PQQRWSLDAKDYTIDHPNTDMVLDV 265
           N N CLTS D   G  +V+  C +    QRW L   D +I + + DMV+DV
Sbjct: 495 NTNNCLTSKDHKQGSPIVLMACSNGWASQRW-LFKNDGSIYNLHDDMVMDV 535


HSP 2 Score: 40.0 bits (92), Expect = 5.1e-02
Identity = 37/139 (26.62%), Postives = 58/139 (41.73%), Query Frame = 1 

Query: 27  GYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGINFPTRLSPCDEKKQTQLWTIVGDGTI 86
           G+  G    P  T + G   LC++        G N    L+ CD  K+ Q W +  DG+I
Sbjct: 430 GWRTGNNTSPFVTSISGYSDLCMQAQ------GSN--VWLADCDNNKKEQQWALYTDGSI 489

Query: 87  RPM-NDKFCLAAEVFYGVINKAVVSECGKVSDPNKKWTQKNDGTIALVDSRMVL-----T 146
           R + N   CL ++  +   +  V+  C      +++W  KNDG+I  +   MV+      
Sbjct: 490 RSVQNTNNCLTSK-DHKQGSPIVLMACSN-GWASQRWLFKNDGSIYNLHDDMVMDVKRSD 549

Query: 147 GDLDYVTLQSNKYTPSQSW 160
             L  + L      P+Q W
Sbjct: 550 PSLKEIILHPYHGKPNQIW 558

[Close]
BLAST of Csa3G217160 vs. Swiss-Prot
Match: RICI_RICCO (Ricin OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 9.3e-20
Identity = 83/254 (32.68%), Postives = 118/254 (46.46%), Query Frame = 1 

Query: 18  LVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGINFPTRLSPCDEKKQT-Q 77
           L+  V PN+   V     P    +VGR+GLC+++       G     +L PC       Q
Sbjct: 305 LIRPVVPNFNADVCMDPEP-IVRIVGRNGLCVDVRDGRFHNGNAI--QLWPCKSNTDANQ 364

Query: 78  LWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNKKWTQKNDGTIALVDSR 137
           LWT+  D TIR  N K         GV    ++ +C   +    +W   ++GTI    S 
Sbjct: 365 LWTLKRDNTIRS-NGKCLTTYGYSPGVY--VMIYDCNTAATDATRWQIWDNGTIINPRSS 424

Query: 138 MVLTGDLDY----VTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCLQSTDDSSHVGLN 197
           +VL          +T+Q+N Y  SQ W  T +    V  I  L  LCLQ+  +S  V + 
Sbjct: 425 LVLAATSGNSGTTLTVQTNIYAVSQGWLPTNNTQPFVTTIVGLYGLCLQA--NSGQVWIE 484

Query: 198 GCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVV-VSKCEDKPQ-QRWSLDAKD 257
            C+++   Q+WALYADG+IR   N++ CLTSD +    VV +  C      QRW +   D
Sbjct: 485 DCSSEKAEQQWALYADGSIRPQQNRDNCLTSDSNIRETVVKILSCGPASSGQRW-MFKND 544

Query: 258 YTIDHPNTDMVLDV 265
            TI +  + +VLDV
Sbjct: 545 GTILNLYSGLVLDV 549

[Close]
BLAST of Csa3G217160 vs. TrEMBL
Match: A0A0A0L9D1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G217160 PE=4 SV=1)

HSP 1 Score: 611.7 bits (1576), Expect = 4.7e-172
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 1 

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60
           MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60

Query: 61  NFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNK 120
           NFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNK
Sbjct: 61  NFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNK 120

Query: 121 KWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCL 180
           KWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCL
Sbjct: 121 KWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCL 180

Query: 181 QSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCEDKP 240
           QSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCEDKP
Sbjct: 181 QSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCEDKP 240

Query: 241 QQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN 294
           QQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN
Sbjct: 241 QQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN 293

[Close]
BLAST of Csa3G217160 vs. TrEMBL
Match: Q9SLV9_CUCSA (XSP30 OS=Cucumis sativus GN=XSP30 PE=2 SV=1)

HSP 1 Score: 610.1 bits (1572), Expect = 1.4e-171
Identity = 292/293 (99.66%), Postives = 292/293 (99.66%), Query Frame = 1 

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60
           MKEIVLSIIVAFSLTTQL IAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI
Sbjct: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60

Query: 61  NFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNK 120
           NFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNK
Sbjct: 61  NFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNK 120

Query: 121 KWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCL 180
           KWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCL
Sbjct: 121 KWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCL 180

Query: 181 QSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCEDKP 240
           QSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCEDKP
Sbjct: 181 QSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCEDKP 240

Query: 241 QQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN 294
           QQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN
Sbjct: 241 QQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN 293

[Close]
BLAST of Csa3G217160 vs. TrEMBL
Match: A0A0A0LAC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G217140 PE=4 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 5.4e-144
Identity = 253/293 (86.35%), Postives = 268/293 (91.47%), Query Frame = 1 

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPW--YKPA 60
           MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEM     YKPA
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60

Query: 61  GINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDP 120
           GINFPTRL PCDEKKQTQLWT+VGDGTIRPMND+FCLAA+VFYGVINKAVVSECGKVSD 
Sbjct: 61  GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS 120

Query: 121 NKKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNL 180
           NK+W  KNDGTIAL +SRMVLTGD DYVTLQS KYTPSQSWEVTESLN MVANIEWLNNL
Sbjct: 121 NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL 180

Query: 181 CLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCED 240
           CLQSTDDSS+VGLNGCNT  KYQRWALYADGTIRQHVN+NYCLTS+Q++ R VVVSKCED
Sbjct: 181 CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED 240

Query: 241 KPQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 292
           KPQQRWSL+AKD TIDHPNT+MVLDV +V DS  P V+VTN  DGSASQRWT+
Sbjct: 241 KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTM 293

[Close]
BLAST of Csa3G217160 vs. TrEMBL
Match: A0A0A0L756_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G219180 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 1.1e-109
Identity = 199/292 (68.15%), Postives = 229/292 (78.42%), Query Frame = 1 

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60
           MKEIVLSI+VAFSLTT L +AVP +YGY V    VPGATHLVGRDGLCLEMSPW+   G 
Sbjct: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQV----VPGATHLVGRDGLCLEMSPWFY-KGS 60

Query: 61  NFPTRLSPCDE-KKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPN 120
           NFPTRLSPC+E KKQTQLWT++ D TIRPMND++CL + V    I   VVSEC K    N
Sbjct: 61  NFPTRLSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVSECAKEPHSN 120

Query: 121 KKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLC 180
           KKW  K D TI  V S MVLTG+ +YVT+Q NK  PSQSWE T+SL  MVANI+WL NLC
Sbjct: 121 KKWIHKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMVANIKWLENLC 180

Query: 181 LQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCEDK 240
           LQST DS++V L+GCN++NK Q W+LY DGTIR+HVN+NYCLTS+QDFGRFV VSKCEDK
Sbjct: 181 LQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCEDK 240

Query: 241 PQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 292
           PQQRW L A+D TI+HPNTDMV+DV SVP    P  +VTN RDG+A+QRW I
Sbjct: 241 PQQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGTATQRWII 287

[Close]
BLAST of Csa3G217160 vs. TrEMBL
Match: Q84LM3_CUCSA (Xylem sap protein 30-kDa (Fragment) OS=Cucumis sativus GN=XSP30 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.5e-32
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 1 

Query: 1  MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60
          MKEIVLSIIVAFSLTTQL IAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI
Sbjct: 1  MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60

Query: 61 NFPTRLSPCD 71
          NFPTRLSPCD
Sbjct: 61 NFPTRLSPCD 70

[Close]
BLAST of Csa3G217160 vs. NCBI nr
Match: gi|700202446|gb|KGN57579.1| (hypothetical protein Csa_3G217160 [Cucumis sativus])

HSP 1 Score: 611.7 bits (1576), Expect = 6.8e-172
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 1 

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60
           MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60

Query: 61  NFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNK 120
           NFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNK
Sbjct: 61  NFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNK 120

Query: 121 KWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCL 180
           KWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCL
Sbjct: 121 KWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCL 180

Query: 181 QSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCEDKP 240
           QSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCEDKP
Sbjct: 181 QSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCEDKP 240

Query: 241 QQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN 294
           QQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN
Sbjct: 241 QQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN 293

[Close]
BLAST of Csa3G217160 vs. NCBI nr
Match: gi|566006087|ref|NP_001274403.1| (uncharacterized protein LOC101221335 precursor [Cucumis sativus])

HSP 1 Score: 610.1 bits (1572), Expect = 2.0e-171
Identity = 292/293 (99.66%), Postives = 292/293 (99.66%), Query Frame = 1 

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60
           MKEIVLSIIVAFSLTTQL IAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI
Sbjct: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60

Query: 61  NFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNK 120
           NFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNK
Sbjct: 61  NFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPNK 120

Query: 121 KWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCL 180
           KWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCL
Sbjct: 121 KWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLCL 180

Query: 181 QSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCEDKP 240
           QSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCEDKP
Sbjct: 181 QSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCEDKP 240

Query: 241 QQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN 294
           QQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN
Sbjct: 241 QQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTIIN 293

[Close]
BLAST of Csa3G217160 vs. NCBI nr
Match: gi|778680239|ref|XP_004151509.2| (PREDICTED: nigrin b-like [Cucumis sativus])

HSP 1 Score: 518.5 bits (1334), Expect = 7.8e-144
Identity = 253/293 (86.35%), Postives = 268/293 (91.47%), Query Frame = 1 

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPW--YKPA 60
           MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEM     YKPA
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60

Query: 61  GINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDP 120
           GINFPTRL PCDEKKQTQLWT+VGDGTIRPMND+FCLAA+VFYGVINKAVVSECGKVSD 
Sbjct: 61  GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS 120

Query: 121 NKKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNL 180
           NK+W  KNDGTIAL +SRMVLTGD DYVTLQS KYTPSQSWEVTESLN MVANIEWLNNL
Sbjct: 121 NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL 180

Query: 181 CLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCED 240
           CLQSTDDSS+VGLNGCNT  KYQRWALYADGTIRQHVN+NYCLTS+Q++ R VVVSKCED
Sbjct: 181 CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED 240

Query: 241 KPQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 292
           KPQQRWSL+AKD TIDHPNT+MVLDV +V DS  P V+VTN  DGSASQRWT+
Sbjct: 241 KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTM 293

[Close]
BLAST of Csa3G217160 vs. NCBI nr
Match: gi|659112133|ref|XP_008456079.1| (PREDICTED: nigrin b-like [Cucumis melo])

HSP 1 Score: 468.4 bits (1204), Expect = 9.3e-129
Identity = 228/292 (78.08%), Postives = 248/292 (84.93%), Query Frame = 1 

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60
           MKEIVLSIIVAFSLTT L +AVP NYGYG  YGGVP ATHLVGRDGLCLEMSPW+   G 
Sbjct: 1   MKEIVLSIIVAFSLTTHLAMAVPSNYGYGGEYGGVPRATHLVGRDGLCLEMSPWFY-RGN 60

Query: 61  NFPTRLSPCDE-KKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPN 120
           NFPTRLSPCDE KKQTQLWT+VGDGTIRPMNDKFCL A+V  G+INKAVV EC K  + N
Sbjct: 61  NFPTRLSPCDEHKKQTQLWTVVGDGTIRPMNDKFCLVADVLVGLINKAVVRECAKEPNSN 120

Query: 121 KKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLC 180
           K+WT K DGTI  V+S MVLTGD DYVTLQSNK TPSQSWE TES   M+ANIEWLNNLC
Sbjct: 121 KRWTHKKDGTITHVESGMVLTGDSDYVTLQSNKNTPSQSWEATESSTPMIANIEWLNNLC 180

Query: 181 LQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCEDK 240
           LQSTDDS+HVGLNGCN +NK QRWALY DGTIRQ+VN+NYCLTSD+  GRF+V+SKCEDK
Sbjct: 181 LQSTDDSNHVGLNGCNRENKDQRWALYGDGTIRQNVNRNYCLTSDEYLGRFIVMSKCEDK 240

Query: 241 PQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 292
           PQQRW+L AKD TIDHPN+DMV+DV  VP   F S +VTNRRDGSASQRWTI
Sbjct: 241 PQQRWNLGAKDSTIDHPNSDMVMDVLFVPYYDFSSAVVTNRRDGSASQRWTI 291

[Close]
BLAST of Csa3G217160 vs. NCBI nr
Match: gi|449457105|ref|XP_004146289.1| (PREDICTED: nigrin b-like [Cucumis sativus])

HSP 1 Score: 404.4 bits (1038), Expect = 1.6e-109
Identity = 199/292 (68.15%), Postives = 229/292 (78.42%), Query Frame = 1 

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60
           MKEIVLSI+VAFSLTT L +AVP +YGY V    VPGATHLVGRDGLCLEMSPW+   G 
Sbjct: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQV----VPGATHLVGRDGLCLEMSPWFY-KGS 60

Query: 61  NFPTRLSPCDE-KKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPN 120
           NFPTRLSPC+E KKQTQLWT++ D TIRPMND++CL + V    I   VVSEC K    N
Sbjct: 61  NFPTRLSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVSECAKEPHSN 120

Query: 121 KKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLC 180
           KKW  K D TI  V S MVLTG+ +YVT+Q NK  PSQSWE T+SL  MVANI+WL NLC
Sbjct: 121 KKWIHKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMVANIKWLENLC 180

Query: 181 LQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCEDK 240
           LQST DS++V L+GCN++NK Q W+LY DGTIR+HVN+NYCLTS+QDFGRFV VSKCEDK
Sbjct: 181 LQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCEDK 240

Query: 241 PQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 292
           PQQRW L A+D TI+HPNTDMV+DV SVP    P  +VTN RDG+A+QRW I
Sbjct: 241 PQQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGTATQRWII 287

The following BLAST results are available for this feature:
BLAST of Csa3G217160 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NIGB_SAMNI2.5e-2532.17Nigrin b OS=Sambucus nigra PE=1 SV=2[more]
SGSL_TRIAN4.4e-2228.95Seed lectin (Fragments) OS=Trichosanthes anguina PE=1 SV=2[more]
RIP1_SAMNI2.4e-2028.52Ribosome-inactivating protein SNAI' OS=Sambucus nigra PE=1 SV=1[more]
ABRC_ABRPR4.2e-2033.33Abrin-c OS=Abrus precatorius PE=1 SV=1[more]
RICI_RICCO9.3e-2032.68Ricin OS=Ricinus communis PE=1 SV=1[more]
BLAST of Csa3G217160 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9D1_CUCSA4.7e-172100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G217160 PE=4 SV=1[more]
Q9SLV9_CUCSA1.4e-17199.66XSP30 OS=Cucumis sativus GN=XSP30 PE=2 SV=1[more]
A0A0A0LAC2_CUCSA5.4e-14486.35Uncharacterized protein OS=Cucumis sativus GN=Csa_3G217140 PE=4 SV=1[more]
A0A0A0L756_CUCSA1.1e-10968.15Uncharacterized protein OS=Cucumis sativus GN=Csa_3G219180 PE=4 SV=1[more]
Q84LM3_CUCSA1.5e-3298.57Xylem sap protein 30-kDa (Fragment) OS=Cucumis sativus GN=XSP30 PE=4 SV=1[more]
BLAST of Csa3G217160 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202446|gb|KGN57579.1|6.8e-172100.00hypothetical protein Csa_3G217160 [Cucumis sativus][more]
gi|566006087|ref|NP_001274403.1|2.0e-17199.66uncharacterized protein LOC101221335 precursor [Cucumis sativus][more]
gi|778680239|ref|XP_004151509.2|7.8e-14486.35PREDICTED: nigrin b-like [Cucumis sativus][more]
gi|659112133|ref|XP_008456079.1|9.3e-12978.08PREDICTED: nigrin b-like [Cucumis melo][more]
gi|449457105|ref|XP_004146289.1|1.6e-10968.15PREDICTED: nigrin b-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000772Ricin_B_lectin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU122128cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G217160.1Csa3G217160.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU122128CU122128transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000772Ricin B, lectin domainPFAMPF00652Ricin_B_lectincoord: 176..289
score: 4.5E-23coord: 40..159
score: 2.0
IPR000772Ricin B, lectin domainSMARTSM00458ricin_3coord: 36..162
score: 4.5E-9coord: 166..292
score: 1.8
IPR000772Ricin B, lectin domainPROFILEPS50231RICIN_B_LECTINcoord: 176..292
score: 26.38coord: 35..162
score: 20
IPR000772Ricin B, lectin domainunknownSSF50370Ricin B-like lectinscoord: 40..164
score: 3.31E-20coord: 173..291
score: 8.24
NoneNo IPR availableGENE3DG3DSA:2.80.10.50coord: 41..162
score: 2.7E-16coord: 172..291
score: 6.0

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G217160Cucumber (Gy14) v2cgybcuB109
Csa3G217160Melon (DHL92) v3.6.1cumedB238
Csa3G217160Silver-seed gourdcarcuB0064
Csa3G217160Silver-seed gourdcarcuB0065
Csa3G217160Silver-seed gourdcarcuB0675
Csa3G217160Watermelon (97103) v2cuwmbB215
Csa3G217160Wax gourdcuwgoB283
Csa3G217160Cucumber (Gy14) v1cgycuB003
Csa3G217160Cucurbita maxima (Rimu)cmacuB320
Csa3G217160Cucurbita maxima (Rimu)cmacuB697
Csa3G217160Cucurbita moschata (Rifu)cmocuB307
Csa3G217160Cucurbita moschata (Rifu)cmocuB687
Csa3G217160Melon (DHL92) v3.5.1cumeB166
Csa3G217160Watermelon (Charleston Gray)cuwcgB230
Csa3G217160Watermelon (97103) v1cuwmB243
Csa3G217160Cucurbita pepo (Zucchini)cpecuB205
Csa3G217160Cucurbita pepo (Zucchini)cpecuB389
Csa3G217160Bottle gourd (USVL1VR-Ls)culsiB211