Csa3G210470 (gene) Cucumber (Chinese Long) v2

NameCsa3G210470
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 14216490 .. 14217298 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCTTCTCGCACAACCCAACACTGAACGGTTCACTACCATCGTCCCCAATTTCATTGTTTCAGTCACAACTCCCTTGCTTGCCGAAAAGTCCCATTGCTACTGTTGGTAATCTAAATGAAATGTTTTGTTTATTTGCTTTCATTCCATTGTAATCCTAATTTTTATTGTAACTTATTAATTAGACCCAAATGAGTCCAGTTGAATTGATTAGTTTGTTATTGACATTTAAAAAACCTATTTAATACAAAATCACTTGTTATTACTGTACATATTTAACTAATTTTAGACTACATTAAGTTAAGTTTTGAAAAGTCAAGCATGTGCTTTGTTTTATTAAAAGCACATAATATGATCACAAGTAGAAATTGTACATCCTGATTGGTGAAGAAGTTGAATTGAATGAATGTGTATCTTTGGTTTTGTATGACTAAAAATTGAATGAAAGGAGAGTAATAGTGTATGGTTAAATAGGAAGAGGTTTGATGAAATGAAGAGAGTTAGGAGTAGGCCATACATCTCATGTTAAATCATTTATAGGACAACCAAATAAGAATGGTTCTTGATTTTAATGAAGAGGAAGAATAGTAAAAAGTGAGATGATAGATAAAGCAAAATGAAAATGGATTAGGGGATTTATTTAAGAAGAAGAGATGAAGTGAGAGCCAAAGAAGAGACAAGCAGTAAGTTTGATTTTTTGTTTGCAGGACGTCGGACTTCGGTGCTTGCTGAATTGGTTGCTAAACGGGTTCATGATCATCGCCCCAGTCACAACTCCCTTGCTTGGTTTGATTCAACAATTCTGTGA

mRNA sequence

ATGACCTTCTCGCACAACCCAACACTGAACGGTTCACTACCATCGTCCCCAATTTCATTGTTTCAGTCACAACTCCCTTGCTTGCCGAAAAGTCCCATTGCTACTGTTGGACGTCGGACTTCGGTGCTTGCTGAATTGGTTGCTAAACGGGTTCATGATCATCGCCCCAGTCACAACTCCCTTGCTTGGTTTGATTCAACAATTCTGTGA

Coding sequence (CDS)

ATGACCTTCTCGCACAACCCAACACTGAACGGTTCACTACCATCGTCCCCAATTTCATTGTTTCAGTCACAACTCCCTTGCTTGCCGAAAAGTCCCATTGCTACTGTTGGACGTCGGACTTCGGTGCTTGCTGAATTGGTTGCTAAACGGGTTCATGATCATCGCCCCAGTCACAACTCCCTTGCTTGGTTTGATTCAACAATTCTGTGA

Protein sequence

MTFSHNPTLNGSLPSSPISLFQSQLPCLPKSPIATVGRRTSVLAELVAKRVHDHRPSHNSLAWFDSTIL*
BLAST of Csa3G210470 vs. TrEMBL
Match: A0A0A0LAB1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G210470 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.1e-31
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1

Query: 1  MTFSHNPTLNGSLPSSPISLFQSQLPCLPKSPIATVGRRTSVLAELVAKRVHDHRPSHNS 60
          MTFSHNPTLNGSLPSSPISLFQSQLPCLPKSPIATVGRRTSVLAELVAKRVHDHRPSHNS
Sbjct: 1  MTFSHNPTLNGSLPSSPISLFQSQLPCLPKSPIATVGRRTSVLAELVAKRVHDHRPSHNS 60

Query: 61 LAWFDSTIL 70
          LAWFDSTIL
Sbjct: 61 LAWFDSTIL 69

BLAST of Csa3G210470 vs. NCBI nr
Match: gi|700202419|gb|KGN57552.1| (hypothetical protein Csa_3G210470 [Cucumis sativus])

HSP 1 Score: 143.3 bits (360), Expect = 1.6e-31
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1

Query: 1  MTFSHNPTLNGSLPSSPISLFQSQLPCLPKSPIATVGRRTSVLAELVAKRVHDHRPSHNS 60
          MTFSHNPTLNGSLPSSPISLFQSQLPCLPKSPIATVGRRTSVLAELVAKRVHDHRPSHNS
Sbjct: 1  MTFSHNPTLNGSLPSSPISLFQSQLPCLPKSPIATVGRRTSVLAELVAKRVHDHRPSHNS 60

Query: 61 LAWFDSTIL 70
          LAWFDSTIL
Sbjct: 61 LAWFDSTIL 69

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LAB1_CUCSA1.1e-31100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G210470 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700202419|gb|KGN57552.1|1.6e-31100.00hypothetical protein Csa_3G210470 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G210470.1Csa3G210470.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None