Csa3G207930 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G207930
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 14150673 .. 14150900 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAAAGGAAATAATTCACAAAAAGAACGAAAGTGCGGATGTTGCCATACAAAGATACTCGTGTCCGTACGTCTCAACCCTCTCCACTGCCCACCTTCTTTCGCTACTACCGACGGTTCAGATGCCTTTCCAAATTCAAAATCCCACATTATTGTTCTCCATTTCCAACCCTTTGATTCGAATAATCATCTTGAGAAGCACAACACCTTGCTGTTCGTTGTTTGA

mRNA sequence

ATGGGAAAAGGAAATAATTCACAAAAAGAACGAAAGTGCGGATGTTGCCATACAAAGATACTCGTGTCCGTACGTCTCAACCCTCTCCACTGCCCACCTTCTTTCGCTACTACCGACGGTTCAGATGCCTTTCCAAATTCAAAATCCCACATTATTGTTCTCCATTTCCAACCCTTTGATTCGAATAATCATCTTGAGAAGCACAACACCTTGCTGTTCGTTGTTTGA

Coding sequence (CDS)

ATGGGAAAAGGAAATAATTCACAAAAAGAACGAAAGTGCGGATGTTGCCATACAAAGATACTCGTGTCCGTACGTCTCAACCCTCTCCACTGCCCACCTTCTTTCGCTACTACCGACGGTTCAGATGCCTTTCCAAATTCAAAATCCCACATTATTGTTCTCCATTTCCAACCCTTTGATTCGAATAATCATCTTGAGAAGCACAACACCTTGCTGTTCGTTGTTTGA

Protein sequence

MGKGNNSQKERKCGCCHTKILVSVRLNPLHCPPSFATTDGSDAFPNSKSHIIVLHFQPFDSNNHLEKHNTLLFVV*
Homology
[Close]
BLAST of Csa3G207930 vs. TrEMBL
Match: A0A0A0L9A6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G207930 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 6.7e-38
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1 

Query: 1  MGKGNNSQKERKCGCCHTKILVSVRLNPLHCPPSFATTDGSDAFPNSKSHIIVLHFQPFD 60
          MGKGNNSQKERKCGCCHTKILVSVRLNPLHCPPSFATTDGSDAFPNSKSHIIVLHFQPFD
Sbjct: 1  MGKGNNSQKERKCGCCHTKILVSVRLNPLHCPPSFATTDGSDAFPNSKSHIIVLHFQPFD 60

Query: 61 SNNHLEKHNTLLFVV 76
          SNNHLEKHNTLLFVV
Sbjct: 61 SNNHLEKHNTLLFVV 75

[Close]
BLAST of Csa3G207930 vs. NCBI nr
Match: gi|700202411|gb|KGN57544.1| (hypothetical protein Csa_3G207930 [Cucumis sativus])

HSP 1 Score: 164.1 bits (414), Expect = 9.7e-38
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1 

Query: 1  MGKGNNSQKERKCGCCHTKILVSVRLNPLHCPPSFATTDGSDAFPNSKSHIIVLHFQPFD 60
          MGKGNNSQKERKCGCCHTKILVSVRLNPLHCPPSFATTDGSDAFPNSKSHIIVLHFQPFD
Sbjct: 1  MGKGNNSQKERKCGCCHTKILVSVRLNPLHCPPSFATTDGSDAFPNSKSHIIVLHFQPFD 60

Query: 61 SNNHLEKHNTLLFVV 76
          SNNHLEKHNTLLFVV
Sbjct: 61 SNNHLEKHNTLLFVV 75

The following BLAST results are available for this feature:
BLAST of Csa3G207930 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9A6_CUCSA6.7e-38100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G207930 PE=4 SV=1[more]
BLAST of Csa3G207930 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202411|gb|KGN57544.1|9.7e-38100.00hypothetical protein Csa_3G207930 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G207930.1Csa3G207930.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G207930Melon (DHL92) v3.5.1cumeB166
Csa3G207930Melon (DHL92) v3.5.1cumeB195
Csa3G207930Watermelon (Charleston Gray)cuwcgB215
Csa3G207930Watermelon (Charleston Gray)cuwcgB230
Csa3G207930Watermelon (97103) v1cuwmB243
Csa3G207930Watermelon (97103) v1cuwmB270
Csa3G207930Cucurbita pepo (Zucchini)cpecuB205
Csa3G207930Cucurbita pepo (Zucchini)cpecuB242
Csa3G207930Cucurbita pepo (Zucchini)cpecuB389
Csa3G207930Bottle gourd (USVL1VR-Ls)culsiB189
Csa3G207930Bottle gourd (USVL1VR-Ls)culsiB211
Csa3G207930Cucumber (Gy14) v2cgybcuB109
Csa3G207930Cucumber (Gy14) v2cgybcuB307
Csa3G207930Melon (DHL92) v3.6.1cumedB181
Csa3G207930Melon (DHL92) v3.6.1cumedB238
Csa3G207930Silver-seed gourdcarcuB0232
Csa3G207930Silver-seed gourdcarcuB0400
Csa3G207930Silver-seed gourdcarcuB0675
Csa3G207930Watermelon (97103) v2cuwmbB198
Csa3G207930Watermelon (97103) v2cuwmbB215
Csa3G207930Wax gourdcuwgoB283
Csa3G207930Cucumber (Chinese Long) v2cucuB129
Csa3G207930Cucumber (Gy14) v1cgycuB320
Csa3G207930Cucumber (Gy14) v1cgycuB350
Csa3G207930Cucurbita maxima (Rimu)cmacuB128
Csa3G207930Cucurbita maxima (Rimu)cmacuB320
Csa3G207930Cucurbita maxima (Rimu)cmacuB513
Csa3G207930Cucurbita maxima (Rimu)cmacuB697
Csa3G207930Cucurbita moschata (Rifu)cmocuB117
Csa3G207930Cucurbita moschata (Rifu)cmocuB307
Csa3G207930Cucurbita moschata (Rifu)cmocuB504
Csa3G207930Cucurbita moschata (Rifu)cmocuB687