Csa3G190880 (gene) Cucumber (Chinese Long) v2

NameCsa3G190880
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 13379333 .. 13379578 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGATCTCACGTCAGTACGCTATGCATCGGCGTTTGTCTTTCGTCGACATGGCCTTTTATCAACGCCAACAAAAGTTATCCCGATGCATTTTTGCATACGTTCACGCCGACGTTCGGATGTGTGTCGACAAAGCCTTTGCTGACACTAGTATGACCTTTAGCCGACGCCATTGTGCGTCGTCGAAAGTCTTGTTTCTTGTAATGTACTTCCATTTCCTCAAAATTCATTCATTGTATTCATGA

mRNA sequence

ATGTCGATCTCACGTCAGTACGCTATGCATCGGCGTTTGTCTTTCGTCGACATGGCCTTTTATCAACGCCAACAAAAGTTATCCCGATGCATTTTTGCATACGTTCACGCCGACGTTCGGATGTGTGTCGACAAAGCCTTTGCTGACACTAGTATGACCTTTAGCCGACGCCATTGTGCGTCGTCGAAAGTCTTGTTTCTTGTAATGTACTTCCATTTCCTCAAAATTCATTCATTGTATTCATGA

Coding sequence (CDS)

ATGTCGATCTCACGTCAGTACGCTATGCATCGGCGTTTGTCTTTCGTCGACATGGCCTTTTATCAACGCCAACAAAAGTTATCCCGATGCATTTTTGCATACGTTCACGCCGACGTTCGGATGTGTGTCGACAAAGCCTTTGCTGACACTAGTATGACCTTTAGCCGACGCCATTGTGCGTCGTCGAAAGTCTTGTTTCTTGTAATGTACTTCCATTTCCTCAAAATTCATTCATTGTATTCATGA

Protein sequence

MSISRQYAMHRRLSFVDMAFYQRQQKLSRCIFAYVHADVRMCVDKAFADTSMTFSRRHCASSKVLFLVMYFHFLKIHSLYS*
BLAST of Csa3G190880 vs. TrEMBL
Match: A0A0A0L918_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G190880 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 8.6e-39
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 1

Query: 1  MSISRQYAMHRRLSFVDMAFYQRQQKLSRCIFAYVHADVRMCVDKAFADTSMTFSRRHCA 60
          MSISRQYAMHRRLSFVDMAFYQRQQKLSRCIFAYVHADVRMCVDKAFADTSMTFSRRHCA
Sbjct: 1  MSISRQYAMHRRLSFVDMAFYQRQQKLSRCIFAYVHADVRMCVDKAFADTSMTFSRRHCA 60

Query: 61 SSKVLFLVMYFHFLKIHSLYS 82
          SSKVLFLVMYFHFLKIHSLYS
Sbjct: 61 SSKVLFLVMYFHFLKIHSLYS 81

BLAST of Csa3G190880 vs. NCBI nr
Match: gi|700202336|gb|KGN57469.1| (hypothetical protein Csa_3G190880 [Cucumis sativus])

HSP 1 Score: 167.2 bits (422), Expect = 1.2e-38
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 1

Query: 1  MSISRQYAMHRRLSFVDMAFYQRQQKLSRCIFAYVHADVRMCVDKAFADTSMTFSRRHCA 60
          MSISRQYAMHRRLSFVDMAFYQRQQKLSRCIFAYVHADVRMCVDKAFADTSMTFSRRHCA
Sbjct: 1  MSISRQYAMHRRLSFVDMAFYQRQQKLSRCIFAYVHADVRMCVDKAFADTSMTFSRRHCA 60

Query: 61 SSKVLFLVMYFHFLKIHSLYS 82
          SSKVLFLVMYFHFLKIHSLYS
Sbjct: 61 SSKVLFLVMYFHFLKIHSLYS 81

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L918_CUCSA8.6e-39100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G190880 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700202336|gb|KGN57469.1|1.2e-38100.00hypothetical protein Csa_3G190880 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G190880.1Csa3G190880.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None