Csa3G190370 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G190370
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 13352312 .. 13352594 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATGAGATCAGAGGGGGAGGATGTCAAAATCAAAAGCACTGAACTCAAATACACAAGAATTCAATGGCTTCAGAAGTTCAGGTAAGCCGGTCATGTCAGGTTTATGAAACAAAAGATAAAGAAATTAAACTTCTGAACAACAAACTTTCACTCGAAAACTTCTATTGAAAGTTATTTGAATGTGCAGTCCTTTCTTTTCTATCTTAGGCAACATAACATTCACGAAGACCAATGAAATTTCAGAGGAGGCAGCAAGAGAAAATAGCACAATAGTCTAG

mRNA sequence

ATGGCAATGAGATCAGAGGGGGAGGATGTCAAAATCAAAAGCACTGAACTCAAATACACAAGAATTCAATGGCTTCAGAAGTTCAGTCCTTTCTTTTCTATCTTAGGCAACATAACATTCACGAAGACCAATGAAATTTCAGAGGAGGCAGCAAGAGAAAATAGCACAATAGTCTAG

Coding sequence (CDS)

ATGGCAATGAGATCAGAGGGGGAGGATGTCAAAATCAAAAGCACTGAACTCAAATACACAAGAATTCAATGGCTTCAGAAGTTCAGTCCTTTCTTTTCTATCTTAGGCAACATAACATTCACGAAGACCAATGAAATTTCAGAGGAGGCAGCAAGAGAAAATAGCACAATAGTCTAG

Protein sequence

MAMRSEGEDVKIKSTELKYTRIQWLQKFSPFFSILGNITFTKTNEISEEAARENSTIV*
Homology
[Close]
BLAST of Csa3G190370 vs. TrEMBL
Match: A0A0A0LA31_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G190370 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.3e-23
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 1 

Query: 1  MAMRSEGEDVKIKSTELKYTRIQWLQKFSPFFSILGNITFTKTNEISEEAARENSTIV 59
          MAMRSEGEDVKIKSTELKYTRIQWLQKFSPFFSILGNITFTKTNEISEEAARENSTIV
Sbjct: 1  MAMRSEGEDVKIKSTELKYTRIQWLQKFSPFFSILGNITFTKTNEISEEAARENSTIV 58

[Close]
BLAST of Csa3G190370 vs. NCBI nr
Match: gi|700202334|gb|KGN57467.1| (hypothetical protein Csa_3G190370 [Cucumis sativus])

HSP 1 Score: 116.3 bits (290), Expect = 1.8e-23
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 1 

Query: 1  MAMRSEGEDVKIKSTELKYTRIQWLQKFSPFFSILGNITFTKTNEISEEAARENSTIV 59
          MAMRSEGEDVKIKSTELKYTRIQWLQKFSPFFSILGNITFTKTNEISEEAARENSTIV
Sbjct: 1  MAMRSEGEDVKIKSTELKYTRIQWLQKFSPFFSILGNITFTKTNEISEEAARENSTIV 58

The following BLAST results are available for this feature:
BLAST of Csa3G190370 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LA31_CUCSA1.3e-23100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G190370 PE=4 SV=1[more]
BLAST of Csa3G190370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202334|gb|KGN57467.1|1.8e-23100.00hypothetical protein Csa_3G190370 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G190370.1Csa3G190370.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G190370Melon (DHL92) v3.6.1cumedB238
Csa3G190370Silver-seed gourdcarcuB0196
Csa3G190370Silver-seed gourdcarcuB0781
Csa3G190370Watermelon (97103) v2cuwmbB215
Csa3G190370Wax gourdcuwgoB283
Csa3G190370Cucumber (Gy14) v1cgycuB132
Csa3G190370Cucurbita maxima (Rimu)cmacuB245
Csa3G190370Cucurbita maxima (Rimu)cmacuB458
Csa3G190370Cucurbita moschata (Rifu)cmocuB232
Csa3G190370Cucurbita moschata (Rifu)cmocuB445
Csa3G190370Watermelon (Charleston Gray)cuwcgB230
Csa3G190370Watermelon (97103) v1cuwmB243
Csa3G190370Cucurbita pepo (Zucchini)cpecuB550
Csa3G190370Cucurbita pepo (Zucchini)cpecuB603
Csa3G190370Bottle gourd (USVL1VR-Ls)culsiB211
Csa3G190370Cucumber (Gy14) v2cgybcuB109