Csa3G187270 (gene) Cucumber (Chinese Long) v2

NameCsa3G187270
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 13183351 .. 13184439 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGATTGTTGTGAAAAGGCCACGGTGCCACCTTGGGGCGTTGCGGCGCTTCGAACCCTATTCGCACGTGGAAGATCGTCGGCAGTCAAGGATGAATCGGATTCCAACAGCTTCTCATCTGTTTTGTCTCAATTTTTTGAGTTCTTTTGGTCTAACTTGGTTCCCAAACACTCCCTCATCATCCGACATGTGGAAGAGAGGGCTAAGGTACTTGCTCTAGCTTGGGTTTTGATAAGAATCATGATGTTCCATACGAACCAATTACAAGATCAAAGGCAACAAAGATTAACAAATCTTTCATTCTTCATGTAGAAGAATGGAGGTCGGTTCAGCCTCAATTCCATAGACCACATGTTAATACAAGAGACGAAGGACCATTTGGGGTATTGAATGTCAGTGTTTCTCGGTGGACAATGGTATACACATTCAGCTTCCTTGAACCCAACACTTTGAAGACCTCATGATTTGGTTAATATCACATTTTTATTGTATTTCCATTTATTTTAATTTGACAAGTTAGGTAACTATCATTAATAGTTTAGAATTAAATATGGTGGTTGGAAATTAGTTGTTGGAAGATAGAAAACATAGTTAATATTTTATTTTGACTTTTGGTATTTTCATTAATTAGGATAGAATCTGTACAAGGATCTACATAAGGCCTTTATCCTTCCATTTATAAAAAGAAGATTTTTTATTAATACAATTTGAAATATCATTTTGAGAGTTTTCCCTTAATTTGCAATCTTTCCTTGATCAAGTTTGATTGTGGAGTGACTCAACTTAGAACAAGATTTCCAAATCTTGTTTCTAGATCTTTGATCTAAGAGATAATCTAATCCTAACTTTCTCTTGGTTGATCTAAATTAGTATAAAGAGGTGTTAGTTTCTTATTTCAAAGGTTATTGCTACGTTAATAGCTCGAATCTTTAGATTGAGGATTAAGATTATCTTATCAGGTTATTAGAAATCTCCGTTTGTTCATTTAAATTTATGAGAGTTTGAACTTGTTTGATGTAACATTTTGTTTCAATTTTGTATTTGAATGATTCTTTGTTATATGTTCAGACGCATGGGAATGTATGA

mRNA sequence

ATGGAAGATTGTTGTGAAAAGGCCACGGTGCCACCTTGGGGCGTTGCGGCGCTTCGAACCCTATTCGCACGTGGAAGATCGTCGGCAGTCAAGGATGAATCGGATTCCAACAGCTTCTCATCTGTTTTGTCTCAATTTTTTGAGTTCTTTTGGTCTAACTTGGTTCCCAAACACTCCCTCATCATCCGACATGTGGAAGAGAGGGCTAAGACGCATGGGAATGTATGA

Coding sequence (CDS)

ATGGAAGATTGTTGTGAAAAGGCCACGGTGCCACCTTGGGGCGTTGCGGCGCTTCGAACCCTATTCGCACGTGGAAGATCGTCGGCAGTCAAGGATGAATCGGATTCCAACAGCTTCTCATCTGTTTTGTCTCAATTTTTTGAGTTCTTTTGGTCTAACTTGGTTCCCAAACACTCCCTCATCATCCGACATGTGGAAGAGAGGGCTAAGACGCATGGGAATGTATGA

Protein sequence

MEDCCEKATVPPWGVAALRTLFARGRSSAVKDESDSNSFSSVLSQFFEFFWSNLVPKHSLIIRHVEERAKTHGNV*
BLAST of Csa3G187270 vs. TrEMBL
Match: A0A0A0L6U4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G187270 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.1e-35
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1

Query: 1  MEDCCEKATVPPWGVAALRTLFARGRSSAVKDESDSNSFSSVLSQFFEFFWSNLVPKHSL 60
          MEDCCEKATVPPWGVAALRTLFARGRSSAVKDESDSNSFSSVLSQFFEFFWSNLVPKHSL
Sbjct: 1  MEDCCEKATVPPWGVAALRTLFARGRSSAVKDESDSNSFSSVLSQFFEFFWSNLVPKHSL 60

Query: 61 IIRHVEERAKTHGNV 76
          IIRHVEERAKTHGNV
Sbjct: 61 IIRHVEERAKTHGNV 75

BLAST of Csa3G187270 vs. NCBI nr
Match: gi|700202320|gb|KGN57453.1| (hypothetical protein Csa_3G187270 [Cucumis sativus])

HSP 1 Score: 156.8 bits (395), Expect = 1.5e-35
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1

Query: 1  MEDCCEKATVPPWGVAALRTLFARGRSSAVKDESDSNSFSSVLSQFFEFFWSNLVPKHSL 60
          MEDCCEKATVPPWGVAALRTLFARGRSSAVKDESDSNSFSSVLSQFFEFFWSNLVPKHSL
Sbjct: 1  MEDCCEKATVPPWGVAALRTLFARGRSSAVKDESDSNSFSSVLSQFFEFFWSNLVPKHSL 60

Query: 61 IIRHVEERAKTHGNV 76
          IIRHVEERAKTHGNV
Sbjct: 61 IIRHVEERAKTHGNV 75

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L6U4_CUCSA1.1e-35100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G187270 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700202320|gb|KGN57453.1|1.5e-35100.00hypothetical protein Csa_3G187270 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G187270.1Csa3G187270.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None