Csa3G182250 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACAATTTTAACATTTAAAACATTATTGATTATACCACTAGCTAATGACTGATATCTTGCATTATCAGGATATTGGGTATGCCAAGCTTGCAAATTTGTCTCCAGAGTATGGTTTGTGTAAGTTTTTATGTTGTCTATTAACGCCTGACCATGCTGCTTATTAAAGATTTTCTTGTGAGCCTAATCTCATTCTTTGTCAAACTCTTGTAGACTCCAGTTTTGTTCCACCATTAATCTACGCAATTATGGGTAGCTCAAGAGATATAGCCATTGGTCCAGTTGCTGTTGTTTCTCTCTTGTTGGGGACACTGCTTCAAGAGGAAATCGATTCTGCTACAAATCCAAAAGACTACCTTCGGCTAGCATTTACAGCTACATTTTTTGCAGGGATCACACAAGCCACCCTTGGAATTCTGAGGTGATTCAGAACTTTCTTTATACACTCGTTAGTTTCATATGTCTTGATATGTTCCTATGAAATTGTCCGCTCAAGTTCCACTTCATCAAGTGTAAATTTAAACTCTGGGAACAGGTTGGGATTCCTTATTGACTTCTTGTCCCATGCTGCCATTGTTGGCTTCATGGGAGGAGCTGCCATCACCATTGCTCTCCAACAACTCAAAGGCTTTCTTGGCATAAAGAAGTTCACAAAGAAAACAGATATTATCTCTGTTATGCAGTCCGTATTTGGCTCAATGAGACACGGAGTGAGTTCTGCTGATTGTAAAATGAAAATTTATCAGCTTCAGCTCATTTGA ATGACTGATATCTTGCATTATCAGGATATTGGGTATGCCAAGCTTGCAAATTTGTCTCCAGAGTATGGTTTGTACTCCAGTTTTGTTCCACCATTAATCTACGCAATTATGGGTAGCTCAAGAGATATAGCCATTGGTCCAGTTGCTGTTGTTTCTCTCTTGTTGGGGACACTGCTTCAAGAGGAAATCGATTCTGCTACAAATCCAAAAGACTACCTTCGGCTAGCATTTACAGCTACATTTTTTGCAGGGATCACACAAGCCACCCTTGGAATTCTGAGGTTGGGATTCCTTATTGACTTCTTGTCCCATGCTGCCATTGTTGGCTTCATGGGAGGAGCTGCCATCACCATTGCTCTCCAACAACTCAAAGGCTTTCTTGGCATAAAGAAGTTCACAAAGAAAACAGATATTATCTCTGTTATGCAGTCCGTATTTGGCTCAATGAGACACGGAGTGAGTTCTGCTGATTGTAAAATGAAAATTTATCAGCTTCAGCTCATTTGA ATGACTGATATCTTGCATTATCAGGATATTGGGTATGCCAAGCTTGCAAATTTGTCTCCAGAGTATGGTTTGTACTCCAGTTTTGTTCCACCATTAATCTACGCAATTATGGGTAGCTCAAGAGATATAGCCATTGGTCCAGTTGCTGTTGTTTCTCTCTTGTTGGGGACACTGCTTCAAGAGGAAATCGATTCTGCTACAAATCCAAAAGACTACCTTCGGCTAGCATTTACAGCTACATTTTTTGCAGGGATCACACAAGCCACCCTTGGAATTCTGAGGTTGGGATTCCTTATTGACTTCTTGTCCCATGCTGCCATTGTTGGCTTCATGGGAGGAGCTGCCATCACCATTGCTCTCCAACAACTCAAAGGCTTTCTTGGCATAAAGAAGTTCACAAAGAAAACAGATATTATCTCTGTTATGCAGTCCGTATTTGGCTCAATGAGACACGGAGTGAGTTCTGCTGATTGTAAAATGAAAATTTATCAGCTTCAGCTCATTTGA MTDILHYQDIGYAKLANLSPEYGLYSSFVPPLIYAIMGSSRDIAIGPVAVVSLLLGTLLQEEIDSATNPKDYLRLAFTATFFAGITQATLGILRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKKFTKKTDIISVMQSVFGSMRHGVSSADCKMKIYQLQLI*
BLAST of Csa3G182250 vs. Swiss-Prot
Match: SUT12_ARATH (Sulfate transporter 1.2 OS=Arabidopsis thaliana GN=SULTR1;2 PE=1 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 1.0e-63 Identity = 123/145 (84.83%), Postives = 131/145 (90.34%), Query Frame = 1
BLAST of Csa3G182250 vs. Swiss-Prot
Match: SUT13_ARATH (Sulfate transporter 1.3 OS=Arabidopsis thaliana GN=SULTR1;3 PE=2 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 4.3e-62 Identity = 119/145 (82.07%), Postives = 128/145 (88.28%), Query Frame = 1
BLAST of Csa3G182250 vs. Swiss-Prot
Match: SUT11_ARATH (Sulfate transporter 1.1 OS=Arabidopsis thaliana GN=SULTR1;1 PE=1 SV=2) HSP 1 Score: 235.7 bits (600), Expect = 3.6e-61 Identity = 121/145 (83.45%), Postives = 126/145 (86.90%), Query Frame = 1
BLAST of Csa3G182250 vs. Swiss-Prot
Match: SUT2_STYHA (High affinity sulfate transporter 2 OS=Stylosanthes hamata GN=ST2 PE=2 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 3.0e-55 Identity = 112/145 (77.24%), Postives = 120/145 (82.76%), Query Frame = 1
BLAST of Csa3G182250 vs. Swiss-Prot
Match: SUT1_STYHA (High affinity sulfate transporter 1 OS=Stylosanthes hamata GN=ST1 PE=2 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 4.3e-54 Identity = 114/147 (77.55%), Postives = 120/147 (81.63%), Query Frame = 1
BLAST of Csa3G182250 vs. TrEMBL
Match: A0A0A0L8R1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182250 PE=4 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 2.3e-86 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1
BLAST of Csa3G182250 vs. TrEMBL
Match: A0A0A0L0P2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G379280 PE=3 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 1.1e-72 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 1
BLAST of Csa3G182250 vs. TrEMBL
Match: W9SH49_9ROSA (Sulfate transporter 1.3 OS=Morus notabilis GN=L484_021534 PE=3 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 1.2e-66 Identity = 133/145 (91.72%), Postives = 137/145 (94.48%), Query Frame = 1
BLAST of Csa3G182250 vs. TrEMBL
Match: M5XLB1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002542mg PE=3 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 1.1e-64 Identity = 129/145 (88.97%), Postives = 136/145 (93.79%), Query Frame = 1
BLAST of Csa3G182250 vs. TrEMBL
Match: A0A022RSV6_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a019382mg PE=3 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 1.9e-64 Identity = 130/145 (89.66%), Postives = 134/145 (92.41%), Query Frame = 1
BLAST of Csa3G182250 vs. TAIR10
Match: AT1G78000.1 (AT1G78000.1 sulfate transporter 1;2) HSP 1 Score: 244.2 bits (622), Expect = 5.8e-65 Identity = 123/145 (84.83%), Postives = 131/145 (90.34%), Query Frame = 1
BLAST of Csa3G182250 vs. TAIR10
Match: AT1G22150.1 (AT1G22150.1 sulfate transporter 1;3) HSP 1 Score: 238.8 bits (608), Expect = 2.4e-63 Identity = 119/145 (82.07%), Postives = 128/145 (88.28%), Query Frame = 1
BLAST of Csa3G182250 vs. TAIR10
Match: AT4G08620.1 (AT4G08620.1 sulphate transporter 1;1) HSP 1 Score: 235.7 bits (600), Expect = 2.1e-62 Identity = 121/145 (83.45%), Postives = 126/145 (86.90%), Query Frame = 1
BLAST of Csa3G182250 vs. TAIR10
Match: AT3G51895.1 (AT3G51895.1 sulfate transporter 3;1) HSP 1 Score: 197.2 bits (500), Expect = 8.1e-51 Identity = 95/139 (68.35%), Postives = 113/139 (81.29%), Query Frame = 1
BLAST of Csa3G182250 vs. TAIR10
Match: AT5G10180.1 (AT5G10180.1 slufate transporter 2;1) HSP 1 Score: 192.6 bits (488), Expect = 2.0e-49 Identity = 96/141 (68.09%), Postives = 113/141 (80.14%), Query Frame = 1
BLAST of Csa3G182250 vs. NCBI nr
Match: gi|700202256|gb|KGN57389.1| (hypothetical protein Csa_3G182250 [Cucumis sativus]) HSP 1 Score: 326.2 bits (835), Expect = 3.3e-86 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1
BLAST of Csa3G182250 vs. NCBI nr
Match: gi|778679623|ref|XP_011651166.1| (PREDICTED: sulfate transporter 1.2-like [Cucumis sativus]) HSP 1 Score: 295.8 bits (756), Expect = 4.7e-77 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 1
BLAST of Csa3G182250 vs. NCBI nr
Match: gi|449465619|ref|XP_004150525.1| (PREDICTED: sulfate transporter 1.3-like [Cucumis sativus]) HSP 1 Score: 280.8 bits (717), Expect = 1.6e-72 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 1
BLAST of Csa3G182250 vs. NCBI nr
Match: gi|659086766|ref|XP_008444099.1| (PREDICTED: sulfate transporter 1.3-like [Cucumis melo]) HSP 1 Score: 277.7 bits (709), Expect = 1.3e-71 Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 1
BLAST of Csa3G182250 vs. NCBI nr
Match: gi|703135477|ref|XP_010105878.1| (Sulfate transporter 1.3 [Morus notabilis]) HSP 1 Score: 260.8 bits (665), Expect = 1.7e-66 Identity = 133/145 (91.72%), Postives = 137/145 (94.48%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |