Csa3G180230 (gene) Cucumber (Chinese Long) v2

NameCsa3G180230
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPentatricopeptide repeat-containing protein, putative; contains IPR002885 (Pentatricopeptide repeat), IPR011990 (Tetratricopeptide-like helical)
LocationChr3 : 12333516 .. 12336930 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTTGGCTGAGCTGGGGAGCAAATTCCATTGGTTATGGAGGAGGGATTTGTATGAGAATGGAGAAACAGAGTGCCACTTCGGGTTTTAGTGAGAACGAAGAGGGACCGAACCGAAGCGAACCGGTATTTATTTATACCTCGAGGCTCGAACTGCACCGACCAAGTTCGGTCGGTTCGGTTCAACAATTCCCCCCGACCCGATTATATTAAAAAAAGCACACACACACAACGCATCCGCAGTGGCGGTGCTCCAACCGCGCGTCTTCCCTCCGACGCTCCCAGGTACCTTCTTCCTTTGCTATTTTACTTCTTTTTGTCCTTTTTAATTTTAATGTTGTTGGGTTATTTTGGATATTGTGATTTTTTTGAATTCGAATTTGATTTCTGGGTGAATCAAGCTTTGGTTGTCTATCTGATAATCTGTTTCTTTCAGTAGTACTCCTTTTGAACTTGGATTTGCTTGAGCTTCGTTATTTTTTTTTTTTTAATTTGTAGGTTTCTTTATTTTATCTTTCAAAGCAAAGCTGGCTTTTTCGGCGACACCGAGAATTTGTTATCAGTTATGCAAATCCCTAGATCATTTTGTCGCCTGTTCAGCACTTTCTCAAAATCACAAAGAGCCATAAGTAATTCAACCTCTTTGAATTCGATCAAGGAGCTTCACGCCCAGCTTGTAAGAGCCCAAATGCACATCGACCCATCTTCTATCTCTGAAGTTATCAAGCATTATGCTCTTTCTCCACAATCTTTGCCCAAGGCCCATTTCGTTTTTAACCAAATTCAGCGACCCACATTGCTAGTTTGGAACCACATGATCCACGGTCTATCAAAGAGCGATCGACCTAATGATGCAATTCATTTCTATAATACCATGTATTACAAAGGAATACAGGGGAGTCATTTGACTTTCATATTTTTATTCAAGTCTTGTGCAAGAGTTTCTGATGTAAGGCAAGGCCAGATGGTTCGTGTTCATTCTATGAAACTTGGGTTTGAATCCTATCTTTTTGTTTCAAATGCCTTGATTCATATGTATGTGTGCTTTGGTGAGTTGGCCATGGCACAAAAGGTGTTCGATGGAATGTTGGAAAGAGATGTAGTTTCATGGAATTCTATAATTTGTGGATATTATCAATTTAATAGATTTAAGAAGGTCTTGGATCTTTTTAGGGAAATGCAGGCTATAAATGTGAGAGCTGATTCTGTGACAATGATGAAAGCTATCTCAGCAACCTGCTTTTTAAGTGAATGGGAAATGGGAGACTATTTGGTGAAGTACATTGATGAACATGGTGTTGTGGTTGATCTCTACTTAGGAAACACTTTGATAGATATGTATGGACGCCGTGGTATGATAGATTTTGCAGGTAGAGTGTTTTATCAGATGAAAGAGAAAAATATAGTATCATGGAATGCAATGATTATGGGGTATGCAAAAGTAGGGAATTTAGTTGCTGCAAAGAAGCTTTTTAATGAAATGCCTTCAAGGGATGTGATCTCATGGACCTCCATGATCATAGGCTATTCTCTAGCTAAGCAACATGCTGAGGCAGTGAAGCTTTTTCAAGAAATGATGGTGTCTATGGTGAAACCAGATGAAATAACTGTAGCTACTGCACTTTCTGCTTGTGCCCACTTGGGCTCACTTGATGCTGGAGAGGCAGTCCATGACTATATACGCAAGCATGACATCAAATCAGACGTTTTTGTAGGAAACTCTTTGATTGATATGTATTGTAAATGTGGCGTGGTTGAGAAGGCTCTACAGGTTTTTAATGACATGAAAACTAGAGACTCAGTGTCATGGACTTCTATTATTTCAGGTCTTGCTGTGAATGGTTTTGCCGAGTCTGCACTTAATGTATTTGATCAAATGTTGAAAGAAGGTATTTGCCCAACTCATGGGACTTTTGTAGGGGTTTTACTAGCTTGTGCTCATGTAGGATTGGTAGACAAGGGAGTGGAACACTTTAAGAGCATGGAAAACACATATAGACTTGCACCAGAAATGAAGCATTATGGATGTGTTGTGGATCTTTTGTGTCGTTCAGGTTATCTGGACATGGCCTACAATTTCATAAAGAAAATGCCAATTGTTCCTGATGTTGTAATATGGAGAATATTGTTAAGTGCTTGCAAGCTTCATGGAAATTTGGTGTTGGCTGAGATTGTCTCAAAGAAGCTTCTTGTATTAGATCCTAGTAACAACGGGAATTATGTTCTCTCTTCAAGCACATATGCAGGTTCAGATAGGTGGGATGATGTTATAAAGATTAGAAAACTGATGGAAGTGACTAACCTACAGAAACCATGTGCTTATAGTTCCATTGAAGTGAGAATATAAGCATGTATTTACCAAACGACTTGAATAACCTGAGTGCTTCTCCAATGCACTGGTTTACTGGATCAATTACTTTGCTGTGATATAAATACCCTCCAGATGTGTCCATATTCTTGAAGGCTGAACTCTCCCATGCTAAATGGATCAACGTTAAGAAAGATTGTTATTGTTGAACGAACCTTTACAGAGTTCTATAAAAGTTTGAAAGCATCCTTCATGATAACCATAGAAGGTTTTAAATGTTCTACTTTTGCCTATATAAGCCTCTATCCCCTTTGTTCAGTTTGACTTTGCATCTACATAAACCCTCATGACTAGTCTTTTCATCATCTTGGACAAATCAGTGCAGTGGATCACTTTATTTATGACTTCAAGTACTGGATGGTAGTTTTCTTAAAATATAGCTATTCTTATCGCTAAGGGAAGAAGCAGGCTTAATTAACGTGTCAAATTTACTATTGATGCCCCATCAAGGTATTCCTATATCTTTACCATTTCGAAAATTAGGTAGTTTTTAGTGGATTATTACATTATATTCATTGATGCGTGCATTTGGTGTGGATACCTCTTGTCTGATGCTGCTTTTGAACTTGAAATTTGACCGATAATGTTGTGGAAAGTCTATGTTGTAAGAAGCATGTGTATCATATTCACTTCATTTTTTTGAGTTGGTTAGTTCTGATTGAACTTTTATGATATGATTTCAGGAAAGCACTTACTTTTCTTACCAACAGATGGTTCATCCAGCAGACCTGGGATTTAAATTGCCTAAAATGTCAGCTTAGAGGGAGGAGCCATGTGTGAGCCTTAAGTGTTGGTGTTCATGCTTGTTGACGTGCGAACATTGGTCCAGAAAATAATATTTTGGACATGGAAGCTGGACCAATTGGACTTGTCACTATGATGGCTGCTCGTGCGTTTAGTGCACCCTAGATTGTCATTATCAATGTGGATGACTATCAATTGTCTGTTGCAGATCAAGATCAGATGAAGTTAAAGTTTCAATTAACATTCAGGTTTTCCGGACTTTTGAAATTCATTTAAAACTCTCCATCCTTTCATAACACGAA

mRNA sequence

ATGGCTTTGGCTGAGCTGGGGAGCAAATTCCATTGGTTATGGAGGAGGGATTTGTATGAGAATGGAGAAACAGAGTGCCACTTCGGGTTTTATGGCGGTGCTCCAACCGCGCGTCTTCCCTCCGACGCTCCCAGGTTTCTTTATTTTATCTTTCAAAGCAAAGCTGGCTTTTTCGGCGACACCGAGAATTTGTTATCAGTTATGCAAATCCCTAGATCATTTTGTCGCCTGTTCAGCACTTTCTCAAAATCACAAAGAGCCATAAGTAATTCAACCTCTTTGAATTCGATCAAGGAGCTTCACGCCCAGCTTGTAAGAGCCCAAATGCACATCGACCCATCTTCTATCTCTGAAGTTATCAAGCATTATGCTCTTTCTCCACAATCTTTGCCCAAGGCCCATTTCGTTTTTAACCAAATTCAGCGACCCACATTGCTAGTTTGGAACCACATGATCCACGGTCTATCAAAGAGCGATCGACCTAATGATGCAATTCATTTCTATAATACCATGTATTACAAAGGAATACAGGGGAGTCATTTGACTTTCATATTTTTATTCAAGTCTTGTGCAAGAGTTTCTGATGTAAGGCAAGGCCAGATGGTTCGTGTTCATTCTATGAAACTTGGGTTTGAATCCTATCTTTTTGTTTCAAATGCCTTGATTCATATGTATGTGTGCTTTGGTGAGTTGGCCATGGCACAAAAGGTGTTCGATGGAATGTTGGAAAGAGATGTAGTTTCATGGAATTCTATAATTTGTGGATATTATCAATTTAATAGATTTAAGAAGGTCTTGGATCTTTTTAGGGAAATGCAGGCTATAAATGTGAGAGCTGATTCTGTGACAATGATGAAAGCTATCTCAGCAACCTGCTTTTTAAGTGAATGGGAAATGGGAGACTATTTGGTGAAGTACATTGATGAACATGGTGTTGTGGTTGATCTCTACTTAGGAAACACTTTGATAGATATGTATGGACGCCGTGGTATGATAGATTTTGCAGGTAGAGTGTTTTATCAGATGAAAGAGAAAAATATAGTATCATGGAATGCAATGATTATGGGGTATGCAAAAGTAGGGAATTTAGTTGCTGCAAAGAAGCTTTTTAATGAAATGCCTTCAAGGGATGTGATCTCATGGACCTCCATGATCATAGGCTATTCTCTAGCTAAGCAACATGCTGAGGCAGTGAAGCTTTTTCAAGAAATGATGGTGTCTATGGTGAAACCAGATGAAATAACTGTAGCTACTGCACTTTCTGCTTGTGCCCACTTGGGCTCACTTGATGCTGGAGAGGCAGTCCATGACTATATACGCAAGCATGACATCAAATCAGACGTTTTTGTAGGAAACTCTTTGATTGATATGTATTGTAAATGTGGCGTGGTTGAGAAGGCTCTACAGGTTTTTAATGACATGAAAACTAGAGACTCAGTGTCATGGACTTCTATTATTTCAGGTCTTGCTGTGAATGGTTTTGCCGAGTCTGCACTTAATGTATTTGATCAAATGTTGAAAGAAGGTATTTGCCCAACTCATGGGACTTTTGTAGGGGTTTTACTAGCTTGTGCTCATGTAGGATTGGTAGACAAGGGAGTGGAACACTTTAAGAGCATGGAAAACACATATAGACTTGCACCAGAAATGAAGCATTATGGATGTGTTGTGGATCTTTTGTGTCGTTCAGGTTATCTGGACATGGCCTACAATTTCATAAAGAAAATGCCAATTGTTCCTGATGTTGTAATATGGAGAATATTGTTAAGTGCTTGCAAGCTTCATGGAAATTTGGTGTTGGCTGAGATTGTCTCAAAGAAGCTTCTTGTATTAGATCCTAGTAACAACGGGAATTATGTTCTCTCTTCAAGCACATATGCAGGTTCAGATAGGTGGGATGATGTTATAAAGATTAGAAAACTGATGGAAGTGACTAACCTACAGAAACCATGTGCTTATAGTTCCATTGAAGTGAGAATATAA

Coding sequence (CDS)

ATGGCTTTGGCTGAGCTGGGGAGCAAATTCCATTGGTTATGGAGGAGGGATTTGTATGAGAATGGAGAAACAGAGTGCCACTTCGGGTTTTATGGCGGTGCTCCAACCGCGCGTCTTCCCTCCGACGCTCCCAGGTTTCTTTATTTTATCTTTCAAAGCAAAGCTGGCTTTTTCGGCGACACCGAGAATTTGTTATCAGTTATGCAAATCCCTAGATCATTTTGTCGCCTGTTCAGCACTTTCTCAAAATCACAAAGAGCCATAAGTAATTCAACCTCTTTGAATTCGATCAAGGAGCTTCACGCCCAGCTTGTAAGAGCCCAAATGCACATCGACCCATCTTCTATCTCTGAAGTTATCAAGCATTATGCTCTTTCTCCACAATCTTTGCCCAAGGCCCATTTCGTTTTTAACCAAATTCAGCGACCCACATTGCTAGTTTGGAACCACATGATCCACGGTCTATCAAAGAGCGATCGACCTAATGATGCAATTCATTTCTATAATACCATGTATTACAAAGGAATACAGGGGAGTCATTTGACTTTCATATTTTTATTCAAGTCTTGTGCAAGAGTTTCTGATGTAAGGCAAGGCCAGATGGTTCGTGTTCATTCTATGAAACTTGGGTTTGAATCCTATCTTTTTGTTTCAAATGCCTTGATTCATATGTATGTGTGCTTTGGTGAGTTGGCCATGGCACAAAAGGTGTTCGATGGAATGTTGGAAAGAGATGTAGTTTCATGGAATTCTATAATTTGTGGATATTATCAATTTAATAGATTTAAGAAGGTCTTGGATCTTTTTAGGGAAATGCAGGCTATAAATGTGAGAGCTGATTCTGTGACAATGATGAAAGCTATCTCAGCAACCTGCTTTTTAAGTGAATGGGAAATGGGAGACTATTTGGTGAAGTACATTGATGAACATGGTGTTGTGGTTGATCTCTACTTAGGAAACACTTTGATAGATATGTATGGACGCCGTGGTATGATAGATTTTGCAGGTAGAGTGTTTTATCAGATGAAAGAGAAAAATATAGTATCATGGAATGCAATGATTATGGGGTATGCAAAAGTAGGGAATTTAGTTGCTGCAAAGAAGCTTTTTAATGAAATGCCTTCAAGGGATGTGATCTCATGGACCTCCATGATCATAGGCTATTCTCTAGCTAAGCAACATGCTGAGGCAGTGAAGCTTTTTCAAGAAATGATGGTGTCTATGGTGAAACCAGATGAAATAACTGTAGCTACTGCACTTTCTGCTTGTGCCCACTTGGGCTCACTTGATGCTGGAGAGGCAGTCCATGACTATATACGCAAGCATGACATCAAATCAGACGTTTTTGTAGGAAACTCTTTGATTGATATGTATTGTAAATGTGGCGTGGTTGAGAAGGCTCTACAGGTTTTTAATGACATGAAAACTAGAGACTCAGTGTCATGGACTTCTATTATTTCAGGTCTTGCTGTGAATGGTTTTGCCGAGTCTGCACTTAATGTATTTGATCAAATGTTGAAAGAAGGTATTTGCCCAACTCATGGGACTTTTGTAGGGGTTTTACTAGCTTGTGCTCATGTAGGATTGGTAGACAAGGGAGTGGAACACTTTAAGAGCATGGAAAACACATATAGACTTGCACCAGAAATGAAGCATTATGGATGTGTTGTGGATCTTTTGTGTCGTTCAGGTTATCTGGACATGGCCTACAATTTCATAAAGAAAATGCCAATTGTTCCTGATGTTGTAATATGGAGAATATTGTTAAGTGCTTGCAAGCTTCATGGAAATTTGGTGTTGGCTGAGATTGTCTCAAAGAAGCTTCTTGTATTAGATCCTAGTAACAACGGGAATTATGTTCTCTCTTCAAGCACATATGCAGGTTCAGATAGGTGGGATGATGTTATAAAGATTAGAAAACTGATGGAAGTGACTAACCTACAGAAACCATGTGCTTATAGTTCCATTGAAGTGAGAATATAA

Protein sequence

MALAELGSKFHWLWRRDLYENGETECHFGFYGGAPTARLPSDAPRFLYFIFQSKAGFFGDTENLLSVMQIPRSFCRLFSTFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIEVRI*
BLAST of Csa3G180230 vs. Swiss-Prot
Match: PP169_ARATH (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 1.8e-116
Identity = 220/566 (38.87%), Postives = 342/566 (60.42%), Query Frame = 1

Query: 97  IKELHAQLVRAQMHIDPSSISEVIKHYALSPQS-LPKAHFVFNQIQRPTLLVWNHMIHGL 156
           +K++ AQ++   + +DP + S +I   ALS    L  +  +   I+ P +  WN  I G 
Sbjct: 69  LKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGF 128

Query: 157 SKSDRPNDAIHFYNTMYYKGIQGS---HLTFIFLFKSCARVSDVRQGQMVRVHSMKLGFE 216
           S+S+ P ++   Y  M   G   S   H T+  LFK CA +     G M+  H +KL  E
Sbjct: 129 SESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLE 188

Query: 217 SYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREM 276
               V NA IHM+   G++  A+KVFD    RD+VSWN +I GY +    +K + +++ M
Sbjct: 189 LVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLM 248

Query: 277 QAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMI 336
           ++  V+ D VTM+  +S+   L +   G    +Y+ E+G+ + + L N L+DM+ + G I
Sbjct: 249 ESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDI 308

Query: 337 DFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAK 396
             A R+F  ++++ IVSW  MI GYA+ G L  ++KLF++M  +DV+ W +MI G   AK
Sbjct: 309 HEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAK 368

Query: 397 QHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGN 456
           +  +A+ LFQEM  S  KPDEIT+   LSAC+ LG+LD G  +H YI K+ +  +V +G 
Sbjct: 369 RGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGT 428

Query: 457 SLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICP 516
           SL+DMY KCG + +AL VF+ ++TR+S+++T+II GLA++G A +A++ F++M+  GI P
Sbjct: 429 SLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAP 488

Query: 517 THGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNF 576
              TF+G+L AC H G++  G ++F  M++ + L P++KHY  +VDLL R+G L+ A   
Sbjct: 489 DEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRL 548

Query: 577 IKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRW 636
           ++ MP+  D  +W  LL  C++HGN+ L E  +KKLL LDPS++G YVL    Y  ++ W
Sbjct: 549 MESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMW 608

Query: 637 DDVIKIRKLMEVTNLQKPCAYSSIEV 659
           +D  + R++M    ++K    SSIEV
Sbjct: 609 EDAKRARRMMNERGVEKIPGCSSIEV 634

BLAST of Csa3G180230 vs. Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 2.6e-115
Identity = 227/574 (39.55%), Postives = 344/574 (59.93%), Query Frame = 1

Query: 88  ISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP-QSLPKAHFVFNQIQRPTLL 147
           I    SL  +K+ H  ++R     DP S S++    ALS   SL  A  VF++I +P   
Sbjct: 37  IERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF 96

Query: 148 VWNHMIHGLSKSDRPNDAIHFYNTMYYKG-IQGSHLTFIFLFKSCARVSDVRQGQMVRVH 207
            WN +I   +    P  +I  +  M  +     +  TF FL K+ A VS +  GQ +   
Sbjct: 97  AWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGM 156

Query: 208 SMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKV 267
           ++K    S +FV+N+LIH Y   G+L  A KVF  + E+DVVSWNS+I G+ Q     K 
Sbjct: 157 AVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKA 216

Query: 268 LDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDM 327
           L+LF++M++ +V+A  VTM+  +SA   +   E G  +  YI+E+ V V+L L N ++DM
Sbjct: 217 LELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDM 276

Query: 328 YGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMI 387
           Y + G I+ A R+F  M+EK+ V+W  M+ GYA   +  AA+++ N MP +D+++W ++I
Sbjct: 277 YTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALI 336

Query: 388 IGYSLAKQHAEAVKLFQEMMVSM-VKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDI 447
             Y    +  EA+ +F E+ +   +K ++IT+ + LSACA +G+L+ G  +H YI+KH I
Sbjct: 337 SAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGI 396

Query: 448 KSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQ 507
           + +  V ++LI MY KCG +EK+ +VFN ++ RD   W+++I GLA++G    A+++F +
Sbjct: 397 RMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYK 456

Query: 508 MLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDLLCRSG 567
           M +  + P   TF  V  AC+H GLVD+    F  ME+ Y + PE KHY C+VD+L RSG
Sbjct: 457 MQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSG 516

Query: 568 YLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLSSS 627
           YL+ A  FI+ MPI P   +W  LL ACK+H NL LAE+   +LL L+P N+G +VL S+
Sbjct: 517 YLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSN 576

Query: 628 TYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIEV 659
            YA   +W++V ++RK M VT L+K    SSIE+
Sbjct: 577 IYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEI 610

BLAST of Csa3G180230 vs. Swiss-Prot
Match: PP235_ARATH (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2)

HSP 1 Score: 399.8 bits (1026), Expect = 5.7e-110
Identity = 214/566 (37.81%), Postives = 332/566 (58.66%), Query Frame = 1

Query: 95  NSIKELHAQLVRAQMHIDPSSISEVIKHYALSPQS-LPKAHFVFNQIQRPTLLVWNHMIH 154
           +  K+LH+Q +   +  +P+   ++   +       +  A+ +F +I  P ++VWN+MI 
Sbjct: 48  DQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIK 107

Query: 155 GLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQ-GQMVRVHSMKLGFE 214
           G SK D   + +  Y  M  +G+     TF FL     R       G+ +  H +K G  
Sbjct: 108 GWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLG 167

Query: 215 SYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREM 274
           S L+V NAL+ MY   G + MA+ VFD   + DV SWN +I GY +   +++ ++L  EM
Sbjct: 168 SNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEM 227

Query: 275 QAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMI 334
           +   V   SVT++  +SA   + + ++   + +Y+ E      L L N L++ Y   G +
Sbjct: 228 ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEM 287

Query: 335 DFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAK 394
           D A R+F  MK ++++SW +++ GY + GNL  A+  F++MP RD ISWT MI GY  A 
Sbjct: 288 DIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAG 347

Query: 395 QHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGN 454
              E++++F+EM  + + PDE T+ + L+ACAHLGSL+ GE +  YI K+ IK+DV VGN
Sbjct: 348 CFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGN 407

Query: 455 SLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICP 514
           +LIDMY KCG  EKA +VF+DM  RD  +WT+++ GLA NG  + A+ VF QM    I P
Sbjct: 408 ALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQP 467

Query: 515 THGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNF 574
              T++GVL AC H G+VD+  + F  M + +R+ P + HYGC+VD+L R+G +  AY  
Sbjct: 468 DDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEI 527

Query: 575 IKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRW 634
           ++KMP+ P+ ++W  LL A +LH +  +AE+ +KK+L L+P N   Y L  + YAG  RW
Sbjct: 528 LRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRW 587

Query: 635 DDVIKIRKLMEVTNLQKPCAYSSIEV 659
            D+ ++R+ +    ++K   +S IEV
Sbjct: 588 KDLREVRRKIVDVAIKKTPGFSLIEV 613

BLAST of Csa3G180230 vs. Swiss-Prot
Match: PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.2e-101
Identity = 208/545 (38.17%), Postives = 312/545 (57.25%), Query Frame = 1

Query: 130 LPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKS 189
           L +A  +F  +       WN M+ G ++ DR  +A+ ++  M+ +G   +  +F  +  +
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161

Query: 190 CARVSDVRQGQMVRVHSM--KLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVV 249
           C+ ++D+ +G  V+VHS+  K  F S +++ +AL+ MY   G +  AQ+VFD M +R+VV
Sbjct: 162 CSGLNDMNKG--VQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 221

Query: 250 SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYI 309
           SWNS+I  + Q     + LD+F+ M    V  D VT+   ISA   LS  ++G       
Sbjct: 222 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQ------ 281

Query: 310 DEHGVVV-------DLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKV 369
           + HG VV       D+ L N  +DMY +   I  A  +F  M  +N+++  +MI GYA  
Sbjct: 282 EVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMA 341

Query: 370 GNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATAL 429
            +  AA+ +F +M  R+V+SW ++I GY+   ++ EA+ LF  +    V P   + A  L
Sbjct: 342 ASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANIL 401

Query: 430 SACAHLGSLDAGEAVHDYIRKHDIK------SDVFVGNSLIDMYCKCGVVEKALQVFNDM 489
            ACA L  L  G   H ++ KH  K       D+FVGNSLIDMY KCG VE+   VF  M
Sbjct: 402 KACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM 461

Query: 490 KTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGV 549
             RD VSW ++I G A NG+   AL +F +ML+ G  P H T +GVL AC H G V++G 
Sbjct: 462 MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR 521

Query: 550 EHFKSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKL 609
            +F SM   + +AP   HY C+VDLL R+G+L+ A + I++MP+ PD VIW  LL+ACK+
Sbjct: 522 HYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKV 581

Query: 610 HGNLVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYS 660
           H N+ L + V++KLL ++PSN+G YVL S+ YA   +W+DV+ +RK M    + K    S
Sbjct: 582 HRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCS 638


HSP 2 Score: 162.9 bits (411), Expect = 1.2e-38
Identity = 92/277 (33.21%), Postives = 145/277 (52.35%), Query Frame = 1

Query: 302 YLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVG 361
           Y+   + + G   ++++ N LID Y + G ++   +VF +M ++NI +WN+++ G  K+G
Sbjct: 41  YVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLG 100

Query: 362 NLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALS 421
            L  A  LF  MP RD  +W SM+ G++   +  EA+  F  M       +E + A+ LS
Sbjct: 101 FLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLS 160

Query: 422 ACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVS 481
           AC+ L  ++ G  VH  I K    SDV++G++L+DMY KCG V  A +VF++M  R+ VS
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 220

Query: 482 WTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSME 541
           W S+I+    NG A  AL+VF  ML+  + P   T   V+ ACA +  +  G E    + 
Sbjct: 221 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280

Query: 542 NTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPI 579
              +L  ++      VD+  +   +  A      MPI
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317


HSP 3 Score: 151.8 bits (382), Expect = 2.7e-35
Identity = 91/323 (28.17%), Postives = 167/323 (51.70%), Query Frame = 1

Query: 202 VRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNR 261
           V    +K GF + +F+ N LI  Y   G L   ++VFD M +R++ +WNS++ G  +   
Sbjct: 42  VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101

Query: 262 FKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNT 321
             +   LFR M       D  T    +S        E        + + G V++ Y   +
Sbjct: 102 LDEADSLFRSMP----ERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFAS 161

Query: 322 LIDMYGRRGMIDFAGRVFYQMKEKNIVS----WNAMIMGYAKVGNLVAAKKLFNEMPSRD 381
           ++        ++   +V   + +   +S     +A++  Y+K GN+  A+++F+EM  R+
Sbjct: 162 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 221

Query: 382 VISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHD 441
           V+SW S+I  +       EA+ +FQ M+ S V+PDE+T+A+ +SACA L ++  G+ VH 
Sbjct: 222 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 281

Query: 442 YIRKHD-IKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAE 501
            + K+D +++D+ + N+ +DMY KC  +++A  +F+ M  R+ ++ TS+ISG A+    +
Sbjct: 282 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 341

Query: 502 SALNVFDQMLKEGICPTHGTFVG 520
           +A  +F +M +  +   +    G
Sbjct: 342 AARLMFTKMAERNVVSWNALIAG 360

BLAST of Csa3G180230 vs. Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 8.3e-101
Identity = 216/579 (37.31%), Postives = 325/579 (56.13%), Query Frame = 1

Query: 88  ISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP--QSLPKAHFVFNQIQRPTL 147
           + N  +L S++ +HAQ+++  +H    ++S++I+   LSP  + LP A  VF  IQ P L
Sbjct: 40  LHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNL 99

Query: 148 LVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVH 207
           L+WN M  G + S  P  A+  Y  M   G+  +  TF F+ KSCA+    ++GQ +  H
Sbjct: 100 LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGH 159

Query: 208 SMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKV 267
            +KLG +  L+V  +LI MYV  G L  A KVFD    RDVVS+ ++I GY      +  
Sbjct: 160 VLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENA 219

Query: 268 LDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDM 327
             LF E+       D V+    IS       ++    L K + +  V  D     T++  
Sbjct: 220 QKLFDEIPV----KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 279

Query: 328 YGRRGMIDFAGRVFYQMKE----KNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISW 387
             + G I+   +V   + +     N+   NA+I  Y+K G L  A  LF  +P +DVISW
Sbjct: 280 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 339

Query: 388 TSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRK 447
            ++I GY+    + EA+ LFQEM+ S   P+++T+ + L ACAHLG++D G  +H YI K
Sbjct: 340 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 399

Query: 448 H--DIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESAL 507
               + +   +  SLIDMY KCG +E A QVFN +  +   SW ++I G A++G A+++ 
Sbjct: 400 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 459

Query: 508 NVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDL 567
           ++F +M K GI P   TFVG+L AC+H G++D G   F++M   Y++ P+++HYGC++DL
Sbjct: 460 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDL 519

Query: 568 LCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNGNY 627
           L  SG    A   I  M + PD VIW  LL ACK+HGN+ L E  ++ L+ ++P N G+Y
Sbjct: 520 LGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSY 579

Query: 628 VLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIEV 659
           VL S+ YA + RW++V K R L+    ++K    SSIE+
Sbjct: 580 VLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEI 614

BLAST of Csa3G180230 vs. TrEMBL
Match: W9S385_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005353 PE=4 SV=1)

HSP 1 Score: 802.0 bits (2070), Expect = 5.5e-229
Identity = 385/572 (67.31%), Postives = 477/572 (83.39%), Query Frame = 1

Query: 86  RAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSPQSLPKAHFVFNQIQRPTL 145
           R     T  NSIKELHA+L+R+ +H DP SIS++I+ YALSP +L KA F F+QI+ PTL
Sbjct: 24  RKTQTPTPTNSIKELHARLIRSHLHTDPFSISQIIRAYALSPPNLSKARFAFDQIEGPTL 83

Query: 146 LVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVH 205
            +WNHMI GLS+SD PN+AI FY+ M  +G  G +LTFIF+ K+CARVSDV  G+ V VH
Sbjct: 84  PLWNHMIRGLSQSDHPNEAIVFYSRMCRQGFVGDNLTFIFVLKACARVSDVLIGKKVHVH 143

Query: 206 SMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKV 265
           S+KLGF++YLFV+NALI+MY   G L  A+K+FD M ERD+VSWNS+ICG  ++NRFK+V
Sbjct: 144 SVKLGFDTYLFVANALIYMYGSCGVLGFARKLFDEMAERDLVSWNSLICGCTKWNRFKEV 203

Query: 266 LDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDM 325
           L LFREM+ +NVRADSVT+MK I A  +L E+E+ D LVKYI+E+ + V++YLGNT+IDM
Sbjct: 204 LGLFREMKVVNVRADSVTIMKVILACSYLGEYEIADSLVKYIEENSIGVNVYLGNTIIDM 263

Query: 326 YGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMI 385
           YGRRG+++FA  VF +M+E+NIVSWNAMIMGYAK+GNLV A+KLF+EMP RDV+SWT+MI
Sbjct: 264 YGRRGLVNFARGVFDRMRERNIVSWNAMIMGYAKLGNLVVARKLFDEMPDRDVVSWTAMI 323

Query: 386 IGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDIK 445
            GYS A QH++AVKLFQEMM + VKPDEITVA+ LSACAHLGSLD GEAVHD+I  H +K
Sbjct: 324 TGYSQANQHSDAVKLFQEMMAAKVKPDEITVASVLSACAHLGSLDVGEAVHDFIINHGVK 383

Query: 446 SDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQM 505
           +D+ VGN+LIDMYCKCG+ EKAL+VF +MK +DSVSWTS+ISGLA+NGFA SAL++F QM
Sbjct: 384 ADICVGNTLIDMYCKCGLAEKALKVFQEMKAKDSVSWTSVISGLAMNGFANSALDLFSQM 443

Query: 506 LKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDLLCRSGY 565
           L+EGI P HG FVG+LL CAH G+VD+G+E+F+SME  Y L PEMKHYGCVVDLL RSG 
Sbjct: 444 LREGIRPNHGAFVGILLVCAHTGMVDEGLEYFESMEKVYGLKPEMKHYGCVVDLLSRSGN 503

Query: 566 LDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLSSST 625
           L+ AY FI+KMP+VPDVV+WRILL+ACKL+GN+ LAEIV+ KLL +DP N+GNYVLSSST
Sbjct: 504 LEKAYEFIQKMPVVPDVVVWRILLNACKLYGNVGLAEIVTHKLLEVDPCNSGNYVLSSST 563

Query: 626 YAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIE 658
           YAG DRWDDV+K+RKLM  +N+QKP  YSSIE
Sbjct: 564 YAGIDRWDDVVKMRKLMSESNVQKPFGYSSIE 595

BLAST of Csa3G180230 vs. TrEMBL
Match: V4U738_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004587mg PE=4 SV=1)

HSP 1 Score: 785.4 bits (2027), Expect = 5.4e-224
Identity = 380/592 (64.19%), Postives = 472/592 (79.73%), Query Frame = 1

Query: 68  MQIPRSFCRLFSTFSKSQRAISNST---SLNSIKELHAQLVRAQMHIDPSSISEVIKHYA 127
           M++ RS  R  +T S +Q+    ST   SLNSIKELHA L+R  +H DPSSIS VIK YA
Sbjct: 1   MKLARSITRHLTTSSTTQKPKRVSTKPISLNSIKELHANLIRTHLHTDPSSISNVIKSYA 60

Query: 128 LSPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFI 187
           LSP  L KAH VFNQ++RPTLLV+NHMI G S+SD+PN+AI  YN MY++G  G +LTFI
Sbjct: 61  LSPSYLDKAHLVFNQLERPTLLVFNHMIQGFSQSDQPNEAIDMYNNMYHQGFTGDNLTFI 120

Query: 188 FLFKSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLER 247
           F+FK+CARV DV  GQ V  H +KLGF SYLFVSNALIH+Y   G L +A+K+FD M  R
Sbjct: 121 FVFKACARVKDVFHGQKVHAHILKLGFGSYLFVSNALIHLYASCGRLGLARKLFDIMTNR 180

Query: 248 DVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLV 307
           D+VSWNS+ICGY Q  RF++VL LF  MQ +NV+AD+VTM+K I A   L  W++ D +V
Sbjct: 181 DLVSWNSLICGYSQCKRFEEVLALFNSMQEVNVKADAVTMVKVILACSSLGRWDIADSMV 240

Query: 308 KYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLV 367
           KYI+E+ +  D+YLGNTLID+YGRRG++D A   F QM +KNIVSWNA+I+GYAKVG L+
Sbjct: 241 KYIEENNIEFDVYLGNTLIDVYGRRGLVDLAQEAFNQMLDKNIVSWNALIIGYAKVGRLI 300

Query: 368 AAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACA 427
            A+KLF+EMP RDVISWTS+I GYS   Q  EAVKLF+EMM++ VKPDEIT+AT LSACA
Sbjct: 301 EAQKLFDEMPGRDVISWTSLITGYSRGNQFVEAVKLFREMMLAKVKPDEITLATVLSACA 360

Query: 428 HLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTS 487
           H+GSLD G+A+HDYI++H  K D+++GNSLIDMYCKCGVVE AL VF++M+ +DSVSWTS
Sbjct: 361 HIGSLDMGKAIHDYIKRHGTKCDLYLGNSLIDMYCKCGVVENALVVFHEMEKKDSVSWTS 420

Query: 488 IISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTY 547
           IISGLAVNGFA+ AL +F QML+EG+ PTHG+FVG+LLAC H GL+D+G+++F+SME  Y
Sbjct: 421 IISGLAVNGFADYALELFMQMLREGVRPTHGSFVGILLACTHAGLIDEGLQYFESMEKVY 480

Query: 548 RLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIV 607
            L PEMKHYGCVVDLL RSG ++ AY F+K MPI PDVV+WRILLSA KLHGNLVLAEI 
Sbjct: 481 GLTPEMKHYGCVVDLLSRSGNVEKAYEFMKAMPIAPDVVVWRILLSASKLHGNLVLAEIA 540

Query: 608 SKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSI 657
           + KLL LDPSN+GNY+L S+TYAGSD+W D  ++R+LM  +++ KP  +SSI
Sbjct: 541 TGKLLELDPSNSGNYILLSNTYAGSDKWGDANRVRELMVESDVYKPSGWSSI 592

BLAST of Csa3G180230 vs. TrEMBL
Match: M5X9W6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016304mg PE=4 SV=1)

HSP 1 Score: 771.5 bits (1991), Expect = 8.0e-220
Identity = 375/573 (65.45%), Postives = 459/573 (80.10%), Query Frame = 1

Query: 86  RAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSPQSLPKAHFVFNQIQRPTL 145
           +++    SL  IKELHA L+R Q+  DPSS+SEV+++YALSP  L KA  VFNQI++PTL
Sbjct: 62  KSMGTPISLTQIKELHAHLIRTQLDKDPSSVSEVVRYYALSPLFLEKALLVFNQIEQPTL 121

Query: 146 LVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVH 205
           L+WNHMI GLS+S + ++AIH YN MY +G+ G+HLTFIF+FK+CAR  D+  GQ V  H
Sbjct: 122 LIWNHMIRGLSQSGQFSEAIHVYNRMYRQGLAGNHLTFIFIFKACARAPDIVHGQTVHTH 181

Query: 206 SMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKV 265
           ++KLGFE YLFVSNALIHMY   G L  AQK+FDGM ERD+VSWNS+ICGY Q NRF+ V
Sbjct: 182 ALKLGFEPYLFVSNALIHMYSSCGYLGFAQKMFDGMRERDLVSWNSLICGYSQCNRFENV 241

Query: 266 LDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDM 325
           L LF+ MQA NVRAD+VTMMK I A  +L EWE+ D +V Y++E+ V +D+YLGNT+IDM
Sbjct: 242 LGLFKAMQAANVRADAVTMMKVILACNYLGEWEIADSMVNYVEENHVDIDVYLGNTMIDM 301

Query: 326 YGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMI 385
           YGRRG+ + A  VF +M E+NIVSWN+MI GYAK GN V A+KLFNEMP R+V+SWTSMI
Sbjct: 302 YGRRGLANLAREVFDRMHERNIVSWNSMIKGYAKAGNFVNARKLFNEMPKRNVVSWTSMI 361

Query: 386 IGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDIK 445
            GYS A QHAEAV LF+EMM + V+ DEITVA+ LSACAH+GSLD GEAVH Y RK+   
Sbjct: 362 TGYSQANQHAEAVSLFEEMMGANVRADEITVASVLSACAHVGSLDVGEAVHRYTRKN--- 421

Query: 446 SDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQM 505
                     DMYCKCGV EKAL+VF  M+ +DSVSWTS+ISGLAVNGFA+SAL +F +M
Sbjct: 422 ----------DMYCKCGVAEKALEVFQWMEEKDSVSWTSVISGLAVNGFADSALEIFSRM 481

Query: 506 LKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDLLCRSGY 565
           L+EGI PTHG FVG+LLACAH GLV+KG+E+F+SME  + L PEMKHYGCVVDLL RSG 
Sbjct: 482 LREGIRPTHGMFVGILLACAHAGLVEKGLEYFESMEKIHGLMPEMKHYGCVVDLLSRSGE 541

Query: 566 LDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLSSST 625
           +D AY FI+ MPIVPDVV+WRILLSACK+HGN+ LAE+V+ KLL LDPSN+GNYVLSS+T
Sbjct: 542 VDKAYEFIQNMPIVPDVVVWRILLSACKVHGNVALAEVVTNKLLELDPSNSGNYVLSSNT 601

Query: 626 YAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIEV 659
           YA SDRW+DVI++R+LM+ +N+QKP   SSIE+
Sbjct: 602 YAASDRWEDVIRMRELMDESNVQKPFGRSSIEI 621

BLAST of Csa3G180230 vs. TrEMBL
Match: A0A061FZU0_THECC (Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao GN=TCM_015073 PE=4 SV=1)

HSP 1 Score: 764.2 bits (1972), Expect = 1.3e-217
Identity = 371/596 (62.25%), Postives = 464/596 (77.85%), Query Frame = 1

Query: 68  MQIPRSFCRLFSTFS---KSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYA 127
           M++ R   R F+ FS   K +R   N  S+N+ KELHA L+R Q H DP SIS VI+ Y+
Sbjct: 1   MKLARHISRRFTCFSTPLKPERVTKNPLSINAAKELHAHLIRTQRHEDPFSISPVIRAYS 60

Query: 128 LSPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYY-KGIQGSHLTF 187
           L+P  L KAH VF Q + PT+  +NHMI G S+S+ PN+AI  YN MYY +G  G  +TF
Sbjct: 61  LAPSHLHKAHHVFYQTKEPTMFNFNHMIRGFSQSNVPNEAIKMYNQMYYLQGFPGDIMTF 120

Query: 188 IFLFKSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLE 247
           IF+FK+CARVSDV  GQ   VH++KLGF+SYLFV+NALIHMY C G+L  A+KVFD M E
Sbjct: 121 IFVFKACARVSDVANGQKFHVHAVKLGFDSYLFVANALIHMYSCCGDLGFARKVFDTMEE 180

Query: 248 RDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYL 307
           RD+VSWNS+ICGY Q  +FK++L  FR MQ  NV+AD+VTM+K I A C+     + D +
Sbjct: 181 RDIVSWNSLICGYSQCKKFKELLGSFRAMQEANVKADAVTMVKVILACCYTDNMNLADSM 240

Query: 308 VKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNL 367
            KYI+E+ V +D+YLGNTLIDMYG+RG+++ A  +F +M E+N+VSWNA+I GY KVG+ 
Sbjct: 241 FKYIEENCVHIDVYLGNTLIDMYGKRGLVNLARELFDRMLERNVVSWNALIKGYMKVGDF 300

Query: 368 VAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSAC 427
           + A+K+F+ M  RDVISWT MI GYS A Q   A+ LFQ+MM + V PDEITVA+ LSAC
Sbjct: 301 IEARKVFDNMKQRDVISWTCMITGYSQANQFTGALNLFQDMMAAKVVPDEITVASVLSAC 360

Query: 428 AHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWT 487
           A+LG+LD G A+HDYI KH I++DV+VGNSLIDMYCKCGVV+KAL+VF+DMK +DSVSWT
Sbjct: 361 ANLGALDVGLAIHDYICKHGIRADVYVGNSLIDMYCKCGVVDKALEVFHDMKEKDSVSWT 420

Query: 488 SIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENT 547
           S+ISGLAVNGFA+SAL  F QMLKEG+ PTHG F+G+LLAC H GLVDKG+++F++ME  
Sbjct: 421 SVISGLAVNGFADSALEFFSQMLKEGVRPTHGCFLGILLACTHAGLVDKGLQYFETMEKV 480

Query: 548 YRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEI 607
           + L PEMKHYGCVVDLL R GYL+ AY FI+ MPI PDVV+WRILL+ACKLHGN+VLAEI
Sbjct: 481 HGLTPEMKHYGCVVDLLSRYGYLERAYQFIRTMPIHPDVVVWRILLNACKLHGNVVLAEI 540

Query: 608 VSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIEVR 660
           V+ KLL LDPSN+GNYVL S+TYA SDRWDD  K+R+LME  N+QKP  +SSIE +
Sbjct: 541 VTNKLLELDPSNSGNYVLLSNTYASSDRWDDATKMRELMEGNNVQKPSGWSSIEAK 596

BLAST of Csa3G180230 vs. TrEMBL
Match: B9R9I2_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1497760 PE=4 SV=1)

HSP 1 Score: 760.0 bits (1961), Expect = 2.4e-216
Identity = 386/622 (62.06%), Postives = 482/622 (77.49%), Query Frame = 1

Query: 41  SDAPRFLYFIFQSKAGFFGDTENLLSVMQIPRSFCRLF---STFSKSQRAISNSTSLNSI 100
           S + R L + +Q     F   +  L  M++ R   RLF   ST  K Q+ I +  S+ SI
Sbjct: 15  SPSQRILSYGYQFAPSKFRAFQQALQ-MKLRRPISRLFTSSSTTRKCQQIIKSGFSIKSI 74

Query: 101 KELHAQLVRAQMHIDPSSISEVIKHYALSPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSK 160
           KE HA L+R   H +P S+S VIK YALS   L KA+F F QI +PTLL++N++I GLS+
Sbjct: 75  KEQHAHLIRTHHHKNPKSMSNVIKSYALSRSHLNKANFAFIQIGQPTLLIFNYLIRGLSQ 134

Query: 161 SDRPNDAIHFYNT-MYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVHSMKLGFESYLF 220
           S+ PN+AI  Y+  MY +GI G +LTFI+LFK+C+RV DV  GQ+  V  +KLGF SYLF
Sbjct: 135 SENPNEAIVMYSDLMYNQGILGDNLTFIYLFKACSRVKDVLHGQVFHVQVLKLGFGSYLF 194

Query: 221 VSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAIN 280
           + N+LI MY  FGEL  AQKVFD M +RD+VSWNS+ICGY Q NRFK+VLDLF  M+  N
Sbjct: 195 IENSLIRMYGYFGELGYAQKVFDKMDDRDLVSWNSLICGYSQCNRFKEVLDLFNLMREAN 254

Query: 281 VRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAG 340
           V ADSVTM+K I A  +L E  + D +VKYI++  V +D+YLGN+LIDMYGRRG++D A 
Sbjct: 255 VTADSVTMVKVILACSYLCEDGVVDSMVKYIEDKHVDIDVYLGNSLIDMYGRRGLVDLAR 314

Query: 341 RVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAE 400
           RVF +M+EKNIVSWNAM+ GYA  G+LVAAKKLFNEMP R+VISWT MI G + A Q ++
Sbjct: 315 RVFDRMQEKNIVSWNAMLTGYATAGDLVAAKKLFNEMPIRNVISWTCMISGCAQANQCSD 374

Query: 401 AVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLID 460
           A+KLFQEMM + VKPDEITV++ LSAC+HLG LD G+ VH+Y+ +HDIKSDV+VGN+LID
Sbjct: 375 ALKLFQEMMDANVKPDEITVSSVLSACSHLGLLDTGQTVHEYMCRHDIKSDVYVGNALID 434

Query: 461 MYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGT 520
           MYCKCGVV+KAL+VF+DMK +DSVSWTS+I GLAVNGF ++   +F QML++G+ PTHG+
Sbjct: 435 MYCKCGVVDKALEVFHDMKKKDSVSWTSMILGLAVNGFVDNVFELFSQMLRDGLQPTHGS 494

Query: 521 FVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKM 580
           F+G+LLAC H GLVDKG+E+F+SME+ Y L PEMKHYGCVVDLL RSG LD AY FIK+M
Sbjct: 495 FIGILLACTHAGLVDKGLEYFESMEHVYGLRPEMKHYGCVVDLLSRSGELDRAYEFIKQM 554

Query: 581 PIVPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVI 640
           P+VPDVV+WRILLSACKLH NLVLAEI + KLL LDPSN+GNYVL S+TYAGSDRWDD  
Sbjct: 555 PVVPDVVLWRILLSACKLHRNLVLAEIATSKLLELDPSNSGNYVLLSNTYAGSDRWDDAS 614

Query: 641 KIRKLMEVTNLQKPCAYSSIEV 659
           ++R LM V ++QKP ++SSIEV
Sbjct: 615 RMRDLMVVGDVQKPSSWSSIEV 635

BLAST of Csa3G180230 vs. TAIR10
Match: AT2G22410.1 (AT2G22410.1 SLOW GROWTH 1)

HSP 1 Score: 421.4 bits (1082), Expect = 1.0e-117
Identity = 220/566 (38.87%), Postives = 342/566 (60.42%), Query Frame = 1

Query: 97  IKELHAQLVRAQMHIDPSSISEVIKHYALSPQS-LPKAHFVFNQIQRPTLLVWNHMIHGL 156
           +K++ AQ++   + +DP + S +I   ALS    L  +  +   I+ P +  WN  I G 
Sbjct: 69  LKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGF 128

Query: 157 SKSDRPNDAIHFYNTMYYKGIQGS---HLTFIFLFKSCARVSDVRQGQMVRVHSMKLGFE 216
           S+S+ P ++   Y  M   G   S   H T+  LFK CA +     G M+  H +KL  E
Sbjct: 129 SESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLE 188

Query: 217 SYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREM 276
               V NA IHM+   G++  A+KVFD    RD+VSWN +I GY +    +K + +++ M
Sbjct: 189 LVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLM 248

Query: 277 QAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMI 336
           ++  V+ D VTM+  +S+   L +   G    +Y+ E+G+ + + L N L+DM+ + G I
Sbjct: 249 ESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDI 308

Query: 337 DFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAK 396
             A R+F  ++++ IVSW  MI GYA+ G L  ++KLF++M  +DV+ W +MI G   AK
Sbjct: 309 HEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAK 368

Query: 397 QHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGN 456
           +  +A+ LFQEM  S  KPDEIT+   LSAC+ LG+LD G  +H YI K+ +  +V +G 
Sbjct: 369 RGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGT 428

Query: 457 SLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICP 516
           SL+DMY KCG + +AL VF+ ++TR+S+++T+II GLA++G A +A++ F++M+  GI P
Sbjct: 429 SLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAP 488

Query: 517 THGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNF 576
              TF+G+L AC H G++  G ++F  M++ + L P++KHY  +VDLL R+G L+ A   
Sbjct: 489 DEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRL 548

Query: 577 IKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRW 636
           ++ MP+  D  +W  LL  C++HGN+ L E  +KKLL LDPS++G YVL    Y  ++ W
Sbjct: 549 MESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMW 608

Query: 637 DDVIKIRKLMEVTNLQKPCAYSSIEV 659
           +D  + R++M    ++K    SSIEV
Sbjct: 609 EDAKRARRMMNERGVEKIPGCSSIEV 634

BLAST of Csa3G180230 vs. TAIR10
Match: AT2G29760.1 (AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 417.5 bits (1072), Expect = 1.5e-116
Identity = 227/574 (39.55%), Postives = 344/574 (59.93%), Query Frame = 1

Query: 88  ISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP-QSLPKAHFVFNQIQRPTLL 147
           I    SL  +K+ H  ++R     DP S S++    ALS   SL  A  VF++I +P   
Sbjct: 37  IERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF 96

Query: 148 VWNHMIHGLSKSDRPNDAIHFYNTMYYKG-IQGSHLTFIFLFKSCARVSDVRQGQMVRVH 207
            WN +I   +    P  +I  +  M  +     +  TF FL K+ A VS +  GQ +   
Sbjct: 97  AWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGM 156

Query: 208 SMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKV 267
           ++K    S +FV+N+LIH Y   G+L  A KVF  + E+DVVSWNS+I G+ Q     K 
Sbjct: 157 AVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKA 216

Query: 268 LDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDM 327
           L+LF++M++ +V+A  VTM+  +SA   +   E G  +  YI+E+ V V+L L N ++DM
Sbjct: 217 LELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDM 276

Query: 328 YGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMI 387
           Y + G I+ A R+F  M+EK+ V+W  M+ GYA   +  AA+++ N MP +D+++W ++I
Sbjct: 277 YTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALI 336

Query: 388 IGYSLAKQHAEAVKLFQEMMVSM-VKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDI 447
             Y    +  EA+ +F E+ +   +K ++IT+ + LSACA +G+L+ G  +H YI+KH I
Sbjct: 337 SAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGI 396

Query: 448 KSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQ 507
           + +  V ++LI MY KCG +EK+ +VFN ++ RD   W+++I GLA++G    A+++F +
Sbjct: 397 RMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYK 456

Query: 508 MLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDLLCRSG 567
           M +  + P   TF  V  AC+H GLVD+    F  ME+ Y + PE KHY C+VD+L RSG
Sbjct: 457 MQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSG 516

Query: 568 YLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLSSS 627
           YL+ A  FI+ MPI P   +W  LL ACK+H NL LAE+   +LL L+P N+G +VL S+
Sbjct: 517 YLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSN 576

Query: 628 TYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIEV 659
            YA   +W++V ++RK M VT L+K    SSIE+
Sbjct: 577 IYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEI 610

BLAST of Csa3G180230 vs. TAIR10
Match: AT3G15930.1 (AT3G15930.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 399.8 bits (1026), Expect = 3.2e-111
Identity = 214/566 (37.81%), Postives = 332/566 (58.66%), Query Frame = 1

Query: 95  NSIKELHAQLVRAQMHIDPSSISEVIKHYALSPQS-LPKAHFVFNQIQRPTLLVWNHMIH 154
           +  K+LH+Q +   +  +P+   ++   +       +  A+ +F +I  P ++VWN+MI 
Sbjct: 48  DQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIK 107

Query: 155 GLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQ-GQMVRVHSMKLGFE 214
           G SK D   + +  Y  M  +G+     TF FL     R       G+ +  H +K G  
Sbjct: 108 GWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLG 167

Query: 215 SYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREM 274
           S L+V NAL+ MY   G + MA+ VFD   + DV SWN +I GY +   +++ ++L  EM
Sbjct: 168 SNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEM 227

Query: 275 QAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMI 334
           +   V   SVT++  +SA   + + ++   + +Y+ E      L L N L++ Y   G +
Sbjct: 228 ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEM 287

Query: 335 DFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAK 394
           D A R+F  MK ++++SW +++ GY + GNL  A+  F++MP RD ISWT MI GY  A 
Sbjct: 288 DIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAG 347

Query: 395 QHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGN 454
              E++++F+EM  + + PDE T+ + L+ACAHLGSL+ GE +  YI K+ IK+DV VGN
Sbjct: 348 CFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGN 407

Query: 455 SLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICP 514
           +LIDMY KCG  EKA +VF+DM  RD  +WT+++ GLA NG  + A+ VF QM    I P
Sbjct: 408 ALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQP 467

Query: 515 THGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNF 574
              T++GVL AC H G+VD+  + F  M + +R+ P + HYGC+VD+L R+G +  AY  
Sbjct: 468 DDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEI 527

Query: 575 IKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRW 634
           ++KMP+ P+ ++W  LL A +LH +  +AE+ +KK+L L+P N   Y L  + YAG  RW
Sbjct: 528 LRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRW 587

Query: 635 DDVIKIRKLMEVTNLQKPCAYSSIEV 659
            D+ ++R+ +    ++K   +S IEV
Sbjct: 588 KDLREVRRKIVDVAIKKTPGFSLIEV 613

BLAST of Csa3G180230 vs. TAIR10
Match: AT2G13600.1 (AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 371.3 bits (952), Expect = 1.2e-102
Identity = 208/545 (38.17%), Postives = 312/545 (57.25%), Query Frame = 1

Query: 130 LPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKS 189
           L +A  +F  +       WN M+ G ++ DR  +A+ ++  M+ +G   +  +F  +  +
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161

Query: 190 CARVSDVRQGQMVRVHSM--KLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVV 249
           C+ ++D+ +G  V+VHS+  K  F S +++ +AL+ MY   G +  AQ+VFD M +R+VV
Sbjct: 162 CSGLNDMNKG--VQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 221

Query: 250 SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYI 309
           SWNS+I  + Q     + LD+F+ M    V  D VT+   ISA   LS  ++G       
Sbjct: 222 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQ------ 281

Query: 310 DEHGVVV-------DLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKV 369
           + HG VV       D+ L N  +DMY +   I  A  +F  M  +N+++  +MI GYA  
Sbjct: 282 EVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMA 341

Query: 370 GNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATAL 429
            +  AA+ +F +M  R+V+SW ++I GY+   ++ EA+ LF  +    V P   + A  L
Sbjct: 342 ASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANIL 401

Query: 430 SACAHLGSLDAGEAVHDYIRKHDIK------SDVFVGNSLIDMYCKCGVVEKALQVFNDM 489
            ACA L  L  G   H ++ KH  K       D+FVGNSLIDMY KCG VE+   VF  M
Sbjct: 402 KACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM 461

Query: 490 KTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGV 549
             RD VSW ++I G A NG+   AL +F +ML+ G  P H T +GVL AC H G V++G 
Sbjct: 462 MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR 521

Query: 550 EHFKSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKL 609
            +F SM   + +AP   HY C+VDLL R+G+L+ A + I++MP+ PD VIW  LL+ACK+
Sbjct: 522 HYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKV 581

Query: 610 HGNLVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYS 660
           H N+ L + V++KLL ++PSN+G YVL S+ YA   +W+DV+ +RK M    + K    S
Sbjct: 582 HRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCS 638


HSP 2 Score: 162.9 bits (411), Expect = 6.6e-40
Identity = 92/277 (33.21%), Postives = 145/277 (52.35%), Query Frame = 1

Query: 302 YLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVG 361
           Y+   + + G   ++++ N LID Y + G ++   +VF +M ++NI +WN+++ G  K+G
Sbjct: 41  YVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLG 100

Query: 362 NLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALS 421
            L  A  LF  MP RD  +W SM+ G++   +  EA+  F  M       +E + A+ LS
Sbjct: 101 FLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLS 160

Query: 422 ACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVS 481
           AC+ L  ++ G  VH  I K    SDV++G++L+DMY KCG V  A +VF++M  R+ VS
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 220

Query: 482 WTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSME 541
           W S+I+    NG A  AL+VF  ML+  + P   T   V+ ACA +  +  G E    + 
Sbjct: 221 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280

Query: 542 NTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPI 579
              +L  ++      VD+  +   +  A      MPI
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317


HSP 3 Score: 151.8 bits (382), Expect = 1.5e-36
Identity = 91/323 (28.17%), Postives = 167/323 (51.70%), Query Frame = 1

Query: 202 VRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNR 261
           V    +K GF + +F+ N LI  Y   G L   ++VFD M +R++ +WNS++ G  +   
Sbjct: 42  VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101

Query: 262 FKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNT 321
             +   LFR M       D  T    +S        E        + + G V++ Y   +
Sbjct: 102 LDEADSLFRSMP----ERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFAS 161

Query: 322 LIDMYGRRGMIDFAGRVFYQMKEKNIVS----WNAMIMGYAKVGNLVAAKKLFNEMPSRD 381
           ++        ++   +V   + +   +S     +A++  Y+K GN+  A+++F+EM  R+
Sbjct: 162 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 221

Query: 382 VISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHD 441
           V+SW S+I  +       EA+ +FQ M+ S V+PDE+T+A+ +SACA L ++  G+ VH 
Sbjct: 222 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 281

Query: 442 YIRKHD-IKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAE 501
            + K+D +++D+ + N+ +DMY KC  +++A  +F+ M  R+ ++ TS+ISG A+    +
Sbjct: 282 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 341

Query: 502 SALNVFDQMLKEGICPTHGTFVG 520
           +A  +F +M +  +   +    G
Sbjct: 342 AARLMFTKMAERNVVSWNALIAG 360

BLAST of Csa3G180230 vs. TAIR10
Match: AT1G08070.1 (AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 369.4 bits (947), Expect = 4.7e-102
Identity = 216/579 (37.31%), Postives = 325/579 (56.13%), Query Frame = 1

Query: 88  ISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP--QSLPKAHFVFNQIQRPTL 147
           + N  +L S++ +HAQ+++  +H    ++S++I+   LSP  + LP A  VF  IQ P L
Sbjct: 40  LHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNL 99

Query: 148 LVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVH 207
           L+WN M  G + S  P  A+  Y  M   G+  +  TF F+ KSCA+    ++GQ +  H
Sbjct: 100 LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGH 159

Query: 208 SMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKV 267
            +KLG +  L+V  +LI MYV  G L  A KVFD    RDVVS+ ++I GY      +  
Sbjct: 160 VLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENA 219

Query: 268 LDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDM 327
             LF E+       D V+    IS       ++    L K + +  V  D     T++  
Sbjct: 220 QKLFDEIPV----KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 279

Query: 328 YGRRGMIDFAGRVFYQMKE----KNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISW 387
             + G I+   +V   + +     N+   NA+I  Y+K G L  A  LF  +P +DVISW
Sbjct: 280 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 339

Query: 388 TSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRK 447
            ++I GY+    + EA+ LFQEM+ S   P+++T+ + L ACAHLG++D G  +H YI K
Sbjct: 340 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 399

Query: 448 H--DIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESAL 507
               + +   +  SLIDMY KCG +E A QVFN +  +   SW ++I G A++G A+++ 
Sbjct: 400 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 459

Query: 508 NVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDL 567
           ++F +M K GI P   TFVG+L AC+H G++D G   F++M   Y++ P+++HYGC++DL
Sbjct: 460 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDL 519

Query: 568 LCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNGNY 627
           L  SG    A   I  M + PD VIW  LL ACK+HGN+ L E  ++ L+ ++P N G+Y
Sbjct: 520 LGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSY 579

Query: 628 VLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIEV 659
           VL S+ YA + RW++V K R L+    ++K    SSIE+
Sbjct: 580 VLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEI 614

BLAST of Csa3G180230 vs. NCBI nr
Match: gi|700202201|gb|KGN57334.1| (hypothetical protein Csa_3G180230 [Cucumis sativus])

HSP 1 Score: 1334.3 bits (3452), Expect = 0.0e+00
Identity = 660/660 (100.00%), Postives = 660/660 (100.00%), Query Frame = 1

Query: 1   MALAELGSKFHWLWRRDLYENGETECHFGFYGGAPTARLPSDAPRFLYFIFQSKAGFFGD 60
           MALAELGSKFHWLWRRDLYENGETECHFGFYGGAPTARLPSDAPRFLYFIFQSKAGFFGD
Sbjct: 1   MALAELGSKFHWLWRRDLYENGETECHFGFYGGAPTARLPSDAPRFLYFIFQSKAGFFGD 60

Query: 61  TENLLSVMQIPRSFCRLFSTFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVI 120
           TENLLSVMQIPRSFCRLFSTFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVI
Sbjct: 61  TENLLSVMQIPRSFCRLFSTFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVI 120

Query: 121 KHYALSPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSH 180
           KHYALSPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSH
Sbjct: 121 KHYALSPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSH 180

Query: 181 LTFIFLFKSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDG 240
           LTFIFLFKSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDG
Sbjct: 181 LTFIFLFKSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDG 240

Query: 241 MLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMG 300
           MLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMG
Sbjct: 241 MLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMG 300

Query: 301 DYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKV 360
           DYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKV
Sbjct: 301 DYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKV 360

Query: 361 GNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATAL 420
           GNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATAL
Sbjct: 361 GNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATAL 420

Query: 421 SACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSV 480
           SACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSV
Sbjct: 421 SACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSV 480

Query: 481 SWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSM 540
           SWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSM
Sbjct: 481 SWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSM 540

Query: 541 ENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVL 600
           ENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVL
Sbjct: 541 ENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVL 600

Query: 601 AEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIEVRI 660
           AEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIEVRI
Sbjct: 601 AEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIEVRI 660

BLAST of Csa3G180230 vs. NCBI nr
Match: gi|778679452|ref|XP_011651133.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 1192.2 bits (3083), Expect = 0.0e+00
Identity = 593/593 (100.00%), Postives = 593/593 (100.00%), Query Frame = 1

Query: 68  MQIPRSFCRLFSTFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP 127
           MQIPRSFCRLFSTFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP
Sbjct: 1   MQIPRSFCRLFSTFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP 60

Query: 128 QSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLF 187
           QSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLF
Sbjct: 61  QSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLF 120

Query: 188 KSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVV 247
           KSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVV
Sbjct: 121 KSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVV 180

Query: 248 SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYI 307
           SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYI
Sbjct: 181 SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYI 240

Query: 308 DEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAK 367
           DEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAK
Sbjct: 241 DEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAK 300

Query: 368 KLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLG 427
           KLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLG
Sbjct: 301 KLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLG 360

Query: 428 SLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIIS 487
           SLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIIS
Sbjct: 361 SLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIIS 420

Query: 488 GLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLA 547
           GLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLA
Sbjct: 421 GLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLA 480

Query: 548 PEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKK 607
           PEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKK
Sbjct: 481 PEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKK 540

Query: 608 LLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIEVRI 661
           LLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIEVRI
Sbjct: 541 LLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIEVRI 593

BLAST of Csa3G180230 vs. NCBI nr
Match: gi|659077346|ref|XP_008439157.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Cucumis melo])

HSP 1 Score: 1137.5 bits (2941), Expect = 0.0e+00
Identity = 563/593 (94.94%), Postives = 578/593 (97.47%), Query Frame = 1

Query: 68  MQIPRSFCRLFSTFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP 127
           M+IP SFCR FSTFS SQR IS STSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP
Sbjct: 1   MKIPISFCRPFSTFSNSQRPISKSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSP 60

Query: 128 QSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLF 187
           QSLPKAH VFNQIQRPTLLVWNHMIHGLSKSDRPNDAI+FYNTMYYKGIQG+HLTFIFLF
Sbjct: 61  QSLPKAHLVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIYFYNTMYYKGIQGNHLTFIFLF 120

Query: 188 KSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVV 247
           KSCARVSDVRQGQMV +HSMKLGF SYLFVSNALIH YVCFGELAMAQKVFDGMLERDVV
Sbjct: 121 KSCARVSDVRQGQMVHLHSMKLGFGSYLFVSNALIHTYVCFGELAMAQKVFDGMLERDVV 180

Query: 248 SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYI 307
           SWNSIICGYYQFNRFKKVLDLFREMQAINVRADS+TMMKAISA+CFLSEWEMGDYLVKYI
Sbjct: 181 SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSLTMMKAISASCFLSEWEMGDYLVKYI 240

Query: 308 DEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAK 367
           DEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAK
Sbjct: 241 DEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAK 300

Query: 368 KLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLG 427
           KLFN+MPSRDVISWTSMIIGYSLAKQHAEAVKLFQEM+ SMVKPDEITVAT LSACAHLG
Sbjct: 301 KLFNQMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMIASMVKPDEITVATVLSACAHLG 360

Query: 428 SLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIIS 487
           SLDAGEAVHDYIR HDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKT+DSVSWTSIIS
Sbjct: 361 SLDAGEAVHDYIRNHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTKDSVSWTSIIS 420

Query: 488 GLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLA 547
           GLAVNGF+ SALNVFDQMLKEGICPTHGTFVGVL+ACAHVGLVDKGVEHFKSMENTYRLA
Sbjct: 421 GLAVNGFSVSALNVFDQMLKEGICPTHGTFVGVLVACAHVGLVDKGVEHFKSMENTYRLA 480

Query: 548 PEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKK 607
           PEMKHYGCVVDL+CRSGYLDMAYNFIKKMP+VPDVVIWRILLSACKLHGNLVLAEIVSKK
Sbjct: 481 PEMKHYGCVVDLMCRSGYLDMAYNFIKKMPMVPDVVIWRILLSACKLHGNLVLAEIVSKK 540

Query: 608 LLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIEVRI 661
           LL LDPSNNGNYVLSSSTYAGSDRWDDVIKIR+LMEVTN+QKP AYSSIEVRI
Sbjct: 541 LLELDPSNNGNYVLSSSTYAGSDRWDDVIKIRELMEVTNIQKPYAYSSIEVRI 593

BLAST of Csa3G180230 vs. NCBI nr
Match: gi|645257207|ref|XP_008234306.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Prunus mume])

HSP 1 Score: 813.5 bits (2100), Expect = 2.6e-232
Identity = 395/595 (66.39%), Postives = 486/595 (81.68%), Query Frame = 1

Query: 68  MQIPRSFCRLFSTFSKSQRA--ISNSTSLNS--IKELHAQLVRAQMHIDPSSISEVIKHY 127
           M++ R   R FST + SQ++  ++N+  ++S  IKELHA L+R Q+H DPSS+SEVI++Y
Sbjct: 1   MKLARPIRRHFSTSTASQKSERVANNRPISSTQIKELHAHLIRTQLHKDPSSVSEVIRYY 60

Query: 128 ALSPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTF 187
           ALSP  L KA  VFNQI++PTLL+WNHMI GLS+S + ++AIH YN MY +G+ G+HLTF
Sbjct: 61  ALSPLFLEKALLVFNQIEQPTLLIWNHMIRGLSQSGQFSEAIHVYNRMYRQGLAGNHLTF 120

Query: 188 IFLFKSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLE 247
           IF+FK+CAR  D+  GQ V  H++KLGFE YLFVSNALIHMY   G L  AQKVFDGM E
Sbjct: 121 IFIFKACARAPDIAHGQTVHAHALKLGFEPYLFVSNALIHMYASCGYLGFAQKVFDGMRE 180

Query: 248 RDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYL 307
           RD+VSWNS+ICGY Q NRF+ VL LF  MQA NVRAD+VTMMK I A  +L EWE+ D +
Sbjct: 181 RDLVSWNSLICGYSQCNRFENVLGLFNAMQAANVRADAVTMMKVILACNYLGEWEIADSM 240

Query: 308 VKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNL 367
           V Y++E+ V +D+YLGNT+IDMYGRRG+ + A  VF +M E+NIVSWN+MI GYAK GN 
Sbjct: 241 VNYVEENHVDIDVYLGNTMIDMYGRRGLANLAREVFDRMHERNIVSWNSMIKGYAKAGNF 300

Query: 368 VAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSAC 427
             A+KLFNEMP R+V+SWTSMI GYS A QHAEAV LF+EMM + V+ DEITVA+ LSAC
Sbjct: 301 FNARKLFNEMPKRNVVSWTSMITGYSQANQHAEAVSLFEEMMGANVRADEITVASVLSAC 360

Query: 428 AHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWT 487
           AH+GSLD GEAVH YIRKH +K+D++VGN+LIDMYCKCGV EKAL+VF  M+ +DSVSWT
Sbjct: 361 AHVGSLDVGEAVHRYIRKHGVKADIYVGNALIDMYCKCGVAEKALEVFQWMEEKDSVSWT 420

Query: 488 SIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENT 547
           S+ISGLAVNGFA+SAL +F +ML+EGI PTHGTF G+LLACAH GLV+KG+E+F+SME  
Sbjct: 421 SVISGLAVNGFADSALELFSRMLREGIQPTHGTFAGILLACAHAGLVEKGLEYFESMEKI 480

Query: 548 YRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEI 607
           + L PEMKHYGCVVDLL RSG +D AY FI+ MPIVPDVV+WRILLSACK+HGN+ LAE+
Sbjct: 481 HGLMPEMKHYGCVVDLLSRSGEVDKAYEFIQNMPIVPDVVVWRILLSACKVHGNVALAEV 540

Query: 608 VSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIEV 659
           V+ KLL LDPSN+GNYVLSS+TYA SDRW+DVI+IR+LM+ +N+QKP   SSIE+
Sbjct: 541 VASKLLELDPSNSGNYVLSSNTYAASDRWEDVIRIRELMDESNVQKPFGRSSIEI 595

BLAST of Csa3G180230 vs. NCBI nr
Match: gi|731423585|ref|XP_010662540.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Vitis vinifera])

HSP 1 Score: 804.7 bits (2077), Expect = 1.2e-229
Identity = 387/594 (65.15%), Postives = 487/594 (81.99%), Query Frame = 1

Query: 68  MQIPRSFCRLFSTFS---KSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYA 127
           M++     RLF++ S   KS R   NS S ++ KELHA L+R Q+H DP  +S+VI+ Y+
Sbjct: 1   MKLATPNTRLFTSSSMAPKSGRVSKNSISTDTSKELHAHLIRTQLHTDPFLMSDVIRSYS 60

Query: 128 LSPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFI 187
           LS  +L KAH VFNQI+ PTL+VWNHMI GLS+SD P +AIH Y  M+++GI G++LT I
Sbjct: 61  LSSTNLHKAHLVFNQIECPTLVVWNHMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLI 120

Query: 188 FLFKSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLER 247
           FLFK+CARVSD+  G+ + VH++KLGFESYLFVSNALIHMY   G+L  AQK+FDGML+R
Sbjct: 121 FLFKACARVSDIVSGRKIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDR 180

Query: 248 DVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLV 307
           D+VSWN++ICGY Q+N++K+VL LF  M A N++AD+VTM+K I A   L +WE  D +V
Sbjct: 181 DLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMV 240

Query: 308 KYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLV 367
           KYI E+ + +D+YLGNTLIDMYGRR + + A  VF +M+E+NIVSWNA++MG+AKVGNL 
Sbjct: 241 KYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRERNIVSWNALVMGHAKVGNLT 300

Query: 368 AAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACA 427
           AA+KLF+ MP RDVISWTSMI GYS A Q ++AVKLFQEMM + VKPD++TVA+ LSACA
Sbjct: 301 AARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACA 360

Query: 428 HLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTS 487
           HLG LD G AVH YIR+H +++D++VGNSLIDMYCKCG+VEKAL+VF+ MK +DSVSWTS
Sbjct: 361 HLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTS 420

Query: 488 IISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTY 547
           +ISGLAVNGFA SAL++F QML+EG+ PTHGTFVG+LLACAH GLV+KG+E+F+SME+ +
Sbjct: 421 VISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVH 480

Query: 548 RLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIV 607
            L P MKHYGCVVDLL RSG +D AY FIKKMPIVPDVV+WRILLSACKLHGN+VLAEI 
Sbjct: 481 GLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGNVVLAEIA 540

Query: 608 SKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIEV 659
           +K+LL LDP ++GNYVL S+TYAG DRWDD +K+R+LME +++QKP   SSIEV
Sbjct: 541 TKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSDVQKPSGSSSIEV 594

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP169_ARATH1.8e-11638.87Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... [more]
PP175_ARATH2.6e-11539.55Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
PP235_ARATH5.7e-11037.81Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis th... [more]
PP151_ARATH2.2e-10138.17Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN... [more]
PPR21_ARATH8.3e-10137.31Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
W9S385_9ROSA5.5e-22967.31Uncharacterized protein OS=Morus notabilis GN=L484_005353 PE=4 SV=1[more]
V4U738_9ROSI5.4e-22464.19Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004587mg PE=4 SV=1[more]
M5X9W6_PRUPE8.0e-22065.45Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016304mg PE=4 SV=1[more]
A0A061FZU0_THECC1.3e-21762.25Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao GN=TCM_... [more]
B9R9I2_RICCO2.4e-21662.06Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
Match NameE-valueIdentityDescription
AT2G22410.11.0e-11738.87 SLOW GROWTH 1[more]
AT2G29760.11.5e-11639.55 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G15930.13.2e-11137.81 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G13600.11.2e-10238.17 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G08070.14.7e-10237.31 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|700202201|gb|KGN57334.1|0.0e+00100.00hypothetical protein Csa_3G180230 [Cucumis sativus][more]
gi|778679452|ref|XP_011651133.1|0.0e+00100.00PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-... [more]
gi|659077346|ref|XP_008439157.1|0.0e+0094.94PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-... [more]
gi|645257207|ref|XP_008234306.1|2.6e-23266.39PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-... [more]
gi|731423585|ref|XP_010662540.1|1.2e-22965.15PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU132868cucumber EST collection version 3.0transcribed_cluster
CU160952cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G180230.1Csa3G180230.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU160952CU160952transcribed_cluster
CU132868CU132868transcribed_cluster


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 348..377
score: 3.2E-8coord: 553..576
score: 0.096coord: 379..405
score: 3.3E-5coord: 320..347
score: 1.
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 445..475
score: 6.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 245..288
score: 7.4E-8coord: 145..192
score: 3.5E-7coord: 478..525
score: 1.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 348..378
score: 8.3E-7coord: 147..171
score: 0.0024coord: 320..348
score: 1.2E-4coord: 452..478
score: 9.7E-7coord: 247..273
score: 5.8E-5coord: 379..412
score: 2.2E-5coord: 480..513
score: 4.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 549..579
score: 6.347coord: 245..279
score: 10.589coord: 280..314
score: 5.437coord: 412..446
score: 7.52coord: 615..649
score: 5.02coord: 144..178
score: 8.944coord: 447..477
score: 10.216coord: 346..380
score: 11.104coord: 315..345
score: 8.484coord: 214..244
score: 6.39coord: 478..512
score: 12.101coord: 513..543
score: 5.678coord: 381..411
score: 7
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 221..276
score: 2.7E-5coord: 579..615
score: 2.7E-5coord: 344..421
score: 2.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 59..656
score:
NoneNo IPR availablePANTHERPTHR24015:SF451SUBFAMILY NOT NAMEDcoord: 59..656
score:

The following gene(s) are paralogous to this gene:

None