Csa3G153190 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G153190
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 10621474 .. 10622319 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCAAGCGGTTAGTGTTAAAATTCAATTCAACAAACTCACAATTTAGTCTCAAGAACAACTCCTTCCCAGGTCCTGAAGAATTAAGAACTACCTTAAGTGCCACACCACTTCTAAAGTATGTTTTTCATTTACTAATTTCTAAACTTACATGCTAATCTCAACCCAATACAATTTTTAAAAACAATTAAGAACACCCCAATCATTCTTTTACTTGAAATTTTCAGTTAATTATTAACTATGATTATAGAAAGATTTCAATTTTCTTTTAAAACCCTTATTCTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTAAAGTAATTATCAGTTTTCGTATGCAAAACCCATTTTTTTCTTTCCAAAATCATTGTTAGCACTTTGCAACTCAATCCCATCAACGCTCATCGGATTTTTTGTTTGCGCGCTTCTGTTTTTCAATCGCTAGCTACAGGTTTTACTTCTCGTTTTTTTTTTTGGTTTGCATTAAACCTTTCTCTCCTTGTTCTTTTGATTGTTCTTTGCAAATTTCTGAATCATGGGAATGTATTTTTTGTTTCGTTGGGATTGTTTTGGAGTGGTGTAATTCAGTTTTTGAATGGGTCGTTTTAGTTATGGATGAGTAGTGGAAGGGGAGTGAGATTGAAATTTGTGATTCATTAATGTTAATGATGAGTTGTTACTTTGAAGCTTGAATTATAGTTTCGAATTGGGTATATGAAACAGTTGTTTGTGGTTTGTGTTTACAGTGTTGTTCGTTATCTGATTGTGAATTTTATGGTCTCAATTTGCAGAACTTTTGATATCAGCATTGAGTAATTTGAGTTTTCTAGTCATACAACAATGA

mRNA sequence

ATGGTCAAGCGGTTAGTGTTAAAATTCAATTCAACAAACTCACAATTTAGTCTCAAGAACAACTCCTTCCCAGGTCCTGAAGAATTAAGAACTACCTTAAGTGCCACACCACTTCTAAACACTTTGCAACTCAATCCCATCAACGCTCATCGGATTTTTTGTTTGCGCGCTTCTGTTTTTCAATCGCTAGCTACAGAACTTTTGATATCAGCATTGAGTAATTTGAGTTTTCTAGTCATACAACAATGA

Coding sequence (CDS)

ATGGTCAAGCGGTTAGTGTTAAAATTCAATTCAACAAACTCACAATTTAGTCTCAAGAACAACTCCTTCCCAGGTCCTGAAGAATTAAGAACTACCTTAAGTGCCACACCACTTCTAAACACTTTGCAACTCAATCCCATCAACGCTCATCGGATTTTTTGTTTGCGCGCTTCTGTTTTTCAATCGCTAGCTACAGAACTTTTGATATCAGCATTGAGTAATTTGAGTTTTCTAGTCATACAACAATGA

Protein sequence

MVKRLVLKFNSTNSQFSLKNNSFPGPEELRTTLSATPLLNTLQLNPINAHRIFCLRASVFQSLATELLISALSNLSFLVIQQ*
Homology
[Close]
BLAST of Csa3G153190 vs. TrEMBL
Match: A0A0A0L7V6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G153190 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 2.4e-36
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 1 

Query: 1  MVKRLVLKFNSTNSQFSLKNNSFPGPEELRTTLSATPLLNTLQLNPINAHRIFCLRASVF 60
          MVKRLVLKFNSTNSQFSLKNNSFPGPEELRTTLSATPLLNTLQLNPINAHRIFCLRASVF
Sbjct: 1  MVKRLVLKFNSTNSQFSLKNNSFPGPEELRTTLSATPLLNTLQLNPINAHRIFCLRASVF 60

Query: 61 QSLATELLISALSNLSFLVIQQ 83
          QSLATELLISALSNLSFLVIQQ
Sbjct: 61 QSLATELLISALSNLSFLVIQQ 82

[Close]
BLAST of Csa3G153190 vs. NCBI nr
Match: gi|700201961|gb|KGN57094.1| (hypothetical protein Csa_3G153190 [Cucumis sativus])

HSP 1 Score: 159.1 bits (401), Expect = 3.4e-36
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 1 

Query: 1  MVKRLVLKFNSTNSQFSLKNNSFPGPEELRTTLSATPLLNTLQLNPINAHRIFCLRASVF 60
          MVKRLVLKFNSTNSQFSLKNNSFPGPEELRTTLSATPLLNTLQLNPINAHRIFCLRASVF
Sbjct: 1  MVKRLVLKFNSTNSQFSLKNNSFPGPEELRTTLSATPLLNTLQLNPINAHRIFCLRASVF 60

Query: 61 QSLATELLISALSNLSFLVIQQ 83
          QSLATELLISALSNLSFLVIQQ
Sbjct: 61 QSLATELLISALSNLSFLVIQQ 82

The following BLAST results are available for this feature:
BLAST of Csa3G153190 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7V6_CUCSA2.4e-36100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G153190 PE=4 SV=1[more]
BLAST of Csa3G153190 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201961|gb|KGN57094.1|3.4e-36100.00hypothetical protein Csa_3G153190 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G153190.1Csa3G153190.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G153190Melon (DHL92) v3.6.1cumedB165
Csa3G153190Melon (DHL92) v3.6.1cumedB223
Csa3G153190Silver-seed gourdcarcuB0071
Csa3G153190Silver-seed gourdcarcuB0633
Csa3G153190Silver-seed gourdcarcuB0723
Csa3G153190Silver-seed gourdcarcuB0854
Csa3G153190Watermelon (97103) v2cuwmbB204
Csa3G153190Watermelon (97103) v2cuwmbB231
Csa3G153190Wax gourdcuwgoB260
Csa3G153190Wax gourdcuwgoB269
Csa3G153190Cucumber (Chinese Long) v2cucuB123
Csa3G153190Cucumber (Gy14) v1cgycuB261
Csa3G153190Cucumber (Gy14) v1cgycuB366
Csa3G153190Cucurbita maxima (Rimu)cmacuB253
Csa3G153190Cucurbita maxima (Rimu)cmacuB355
Csa3G153190Cucurbita maxima (Rimu)cmacuB363
Csa3G153190Cucurbita maxima (Rimu)cmacuB814
Csa3G153190Cucurbita maxima (Rimu)cmacuB885
Csa3G153190Cucurbita moschata (Rifu)cmocuB239
Csa3G153190Cucurbita moschata (Rifu)cmocuB345
Csa3G153190Cucurbita moschata (Rifu)cmocuB354
Csa3G153190Cucurbita moschata (Rifu)cmocuB806
Csa3G153190Cucurbita moschata (Rifu)cmocuB872
Csa3G153190Melon (DHL92) v3.5.1cumeB180
Csa3G153190Melon (DHL92) v3.5.1cumeB236
Csa3G153190Watermelon (Charleston Gray)cuwcgB185
Csa3G153190Watermelon (Charleston Gray)cuwcgB222
Csa3G153190Watermelon (Charleston Gray)cuwcgB247
Csa3G153190Watermelon (97103) v1cuwmB191
Csa3G153190Watermelon (97103) v1cuwmB233
Csa3G153190Watermelon (97103) v1cuwmB279
Csa3G153190Cucurbita pepo (Zucchini)cpecuB132
Csa3G153190Cucurbita pepo (Zucchini)cpecuB307
Csa3G153190Cucurbita pepo (Zucchini)cpecuB609
Csa3G153190Cucurbita pepo (Zucchini)cpecuB859
Csa3G153190Bottle gourd (USVL1VR-Ls)culsiB150
Csa3G153190Bottle gourd (USVL1VR-Ls)culsiB178
Csa3G153190Bottle gourd (USVL1VR-Ls)culsiB199
Csa3G153190Cucumber (Gy14) v2cgybcuB109
Csa3G153190Cucumber (Gy14) v2cgybcuB268
Csa3G153190Cucumber (Gy14) v2cgybcuB310