Csa3G146620 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G146620
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 9871457 .. 9872143 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCACACGAGGCTGAGTCTATGATATCGAGGTTTTACTCGGTTTTTGAGGATATCTGGATTCAGAAAGCAAAGACTGAACCTATACCGTTGTGGAGTTGCCAGAAGGAATGTAGAGTAGAGATATTTTGGTCAATTGGAAACTAACCCTCAGCAACGAGTTTTCACGGTAGGCCTTCATATCAAATTATCAACACCATGGATTTTATACTCTACTGACCAAACTGTGAGCTTACTCCTATTTGTTGTCTTTGTTACTTATATATTGAATGTATTAGCAAGTGAGAGTTAGAAACGAGCATTGTTTGAAGATATATACTTAAATCTTTGCCTCTTCAACTCTCTCAGGAAATGATTATTTATGTTTTGAATTCTTGTGAACATTGGAACTTTTCTCAGCTAAACTTCTACGTTCCCATTGGTTGCTTTCCATGACTTCTGTGGAGCTTAGTGTAGGGGATCCAGTCTGGTTCAGATTTCTTATAACTACATGCAGAAGAGAGGTAACTTCTCTTGATTACATTTTGCTAAAATCAGAACATATTTGAAACGGGAAAAGAAGAAGAAGACATAATCCCACTTATTACATAGAAAGGAAGCTTCGTGGAATGCAGTGAAACCGCCATTTTCTTCATCAGGATGATGATGATGAAGATGATTGTTGCACCTACTGTTGACGTGTGA

mRNA sequence

ATGGCTTCACACGAGGCTGAGTCTATGATATCGAGGTTTTACTCGGTTTTTGAGGATATCTGGATTCAGAAAGCAAAGACTGAACCTATACCGTTGTGGAGTTGCCAGAAGGAATCTAAACTTCTACGTTCCCATTGGTTGCTTTCCATGACTTCTGTGGAGCTTAGTGTAGGGGATCCAGTCTGGTTCAGATTTCTTATAACTACATGCAGAAGAGAGAAAGGAAGCTTCGTGGAATGCAGTGAAACCGCCATTTTCTTCATCAGGATGATGATGATGAAGATGATTGTTGCACCTACTGTTGACGTGTGA

Coding sequence (CDS)

ATGGCTTCACACGAGGCTGAGTCTATGATATCGAGGTTTTACTCGGTTTTTGAGGATATCTGGATTCAGAAAGCAAAGACTGAACCTATACCGTTGTGGAGTTGCCAGAAGGAATCTAAACTTCTACGTTCCCATTGGTTGCTTTCCATGACTTCTGTGGAGCTTAGTGTAGGGGATCCAGTCTGGTTCAGATTTCTTATAACTACATGCAGAAGAGAGAAAGGAAGCTTCGTGGAATGCAGTGAAACCGCCATTTTCTTCATCAGGATGATGATGATGAAGATGATTGTTGCACCTACTGTTGACGTGTGA

Protein sequence

MASHEAESMISRFYSVFEDIWIQKAKTEPIPLWSCQKESKLLRSHWLLSMTSVELSVGDPVWFRFLITTCRREKGSFVECSETAIFFIRMMMMKMIVAPTVDV*
Homology
[Close]
BLAST of Csa3G146620 vs. TrEMBL
Match: A0A0A0L8P6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G146620 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 3.0e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MASHEAESMISRFYSVFEDIWIQKAKTEPIPLWSCQKESKLLRSHWLLSMTSVELSVGDP 60
           MASHEAESMISRFYSVFEDIWIQKAKTEPIPLWSCQKESKLLRSHWLLSMTSVELSVGDP
Sbjct: 1   MASHEAESMISRFYSVFEDIWIQKAKTEPIPLWSCQKESKLLRSHWLLSMTSVELSVGDP 60

Query: 61  VWFRFLITTCRREKGSFVECSETAIFFIRMMMMKMIVAPTVDV 104
           VWFRFLITTCRREKGSFVECSETAIFFIRMMMMKMIVAPTVDV
Sbjct: 61  VWFRFLITTCRREKGSFVECSETAIFFIRMMMMKMIVAPTVDV 103

[Close]
BLAST of Csa3G146620 vs. NCBI nr
Match: gi|700201844|gb|KGN56977.1| (hypothetical protein Csa_3G146620 [Cucumis sativus])

HSP 1 Score: 212.2 bits (539), Expect = 4.2e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MASHEAESMISRFYSVFEDIWIQKAKTEPIPLWSCQKESKLLRSHWLLSMTSVELSVGDP 60
           MASHEAESMISRFYSVFEDIWIQKAKTEPIPLWSCQKESKLLRSHWLLSMTSVELSVGDP
Sbjct: 1   MASHEAESMISRFYSVFEDIWIQKAKTEPIPLWSCQKESKLLRSHWLLSMTSVELSVGDP 60

Query: 61  VWFRFLITTCRREKGSFVECSETAIFFIRMMMMKMIVAPTVDV 104
           VWFRFLITTCRREKGSFVECSETAIFFIRMMMMKMIVAPTVDV
Sbjct: 61  VWFRFLITTCRREKGSFVECSETAIFFIRMMMMKMIVAPTVDV 103

The following BLAST results are available for this feature:
BLAST of Csa3G146620 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8P6_CUCSA3.0e-52100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G146620 PE=4 SV=1[more]
BLAST of Csa3G146620 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201844|gb|KGN56977.1|4.2e-52100.00hypothetical protein Csa_3G146620 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G146620.1Csa3G146620.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G146620Bottle gourd (USVL1VR-Ls)culsiB150
Csa3G146620Bottle gourd (USVL1VR-Ls)culsiB177
Csa3G146620Bottle gourd (USVL1VR-Ls)culsiB209
Csa3G146620Cucumber (Gy14) v2cgybcuB109
Csa3G146620Cucumber (Gy14) v2cgybcuB308
Csa3G146620Melon (DHL92) v3.6.1cumedB177
Csa3G146620Melon (DHL92) v3.6.1cumedB223
Csa3G146620Silver-seed gourdcarcuB0115
Csa3G146620Silver-seed gourdcarcuB0350
Csa3G146620Silver-seed gourdcarcuB0633
Csa3G146620Silver-seed gourdcarcuB0865
Csa3G146620Watermelon (97103) v2cuwmbB204
Csa3G146620Watermelon (97103) v2cuwmbB231
Csa3G146620Watermelon (97103) v2cuwmbB259
Csa3G146620Wax gourdcuwgoB252
Csa3G146620Wax gourdcuwgoB269
Csa3G146620Wax gourdcuwgoB346
Csa3G146620Cucumber (Chinese Long) v2cucuB130
Csa3G146620Cucumber (Gy14) v1cgycuB339
Csa3G146620Cucumber (Gy14) v1cgycuB366
Csa3G146620Cucurbita maxima (Rimu)cmacuB253
Csa3G146620Cucurbita maxima (Rimu)cmacuB355
Csa3G146620Cucurbita maxima (Rimu)cmacuB364
Csa3G146620Cucurbita maxima (Rimu)cmacuB814
Csa3G146620Cucurbita maxima (Rimu)cmacuB885
Csa3G146620Cucurbita moschata (Rifu)cmocuB239
Csa3G146620Cucurbita moschata (Rifu)cmocuB353
Csa3G146620Cucurbita moschata (Rifu)cmocuB806
Csa3G146620Cucurbita moschata (Rifu)cmocuB872
Csa3G146620Melon (DHL92) v3.5.1cumeB192
Csa3G146620Melon (DHL92) v3.5.1cumeB196
Csa3G146620Melon (DHL92) v3.5.1cumeB236
Csa3G146620Watermelon (Charleston Gray)cuwcgB183
Csa3G146620Watermelon (Charleston Gray)cuwcgB222
Csa3G146620Watermelon (Charleston Gray)cuwcgB246
Csa3G146620Watermelon (97103) v1cuwmB189
Csa3G146620Watermelon (97103) v1cuwmB233
Csa3G146620Watermelon (97103) v1cuwmB279
Csa3G146620Cucurbita pepo (Zucchini)cpecuB310
Csa3G146620Cucurbita pepo (Zucchini)cpecuB609
Csa3G146620Cucurbita pepo (Zucchini)cpecuB859