Csa3G146400 (gene) Cucumber (Chinese Long) v2

NameCsa3G146400
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 9762838 .. 9762990 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAAGGAAGTGGACGTGGACGTCGTACCAAATGGAAAATGGAGACAATTTGTGTACGCGCCTCTGCCAGCACAGCAAGACGAGGCTGACGTGTCTTCTTGCCACGGTGTGTGTCACGCCACAAACATGGACCCTCCTCTATCCTTCTAA

mRNA sequence

ATGGGAAAGGAAGTGGACGTGGACGTCGTACCAAATGGAAAATGGAGACAATTTGTGTACGCGCCTCTGCCAGCACAGCAAGACGAGGCTGACGTGTCTTCTTGCCACGGTGTGTGTCACGCCACAAACATGGACCCTCCTCTATCCTTCTAA

Coding sequence (CDS)

ATGGGAAAGGAAGTGGACGTGGACGTCGTACCAAATGGAAAATGGAGACAATTTGTGTACGCGCCTCTGCCAGCACAGCAAGACGAGGCTGACGTGTCTTCTTGCCACGGTGTGTGTCACGCCACAAACATGGACCCTCCTCTATCCTTCTAA

Protein sequence

MGKEVDVDVVPNGKWRQFVYAPLPAQQDEADVSSCHGVCHATNMDPPLSF*
BLAST of Csa3G146400 vs. TrEMBL
Match: A0A0A0L7E8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G146400 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.7e-22
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 1

Query: 1  MGKEVDVDVVPNGKWRQFVYAPLPAQQDEADVSSCHGVCHATNMDPPLSF 51
          MGKEVDVDVVPNGKWRQFVYAPLPAQQDEADVSSCHGVCHATNMDPPLSF
Sbjct: 1  MGKEVDVDVVPNGKWRQFVYAPLPAQQDEADVSSCHGVCHATNMDPPLSF 50

BLAST of Csa3G146400 vs. NCBI nr
Match: gi|700201821|gb|KGN56954.1| (hypothetical protein Csa_3G146400 [Cucumis sativus])

HSP 1 Score: 111.7 bits (278), Expect = 3.8e-22
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 1

Query: 1  MGKEVDVDVVPNGKWRQFVYAPLPAQQDEADVSSCHGVCHATNMDPPLSF 51
          MGKEVDVDVVPNGKWRQFVYAPLPAQQDEADVSSCHGVCHATNMDPPLSF
Sbjct: 1  MGKEVDVDVVPNGKWRQFVYAPLPAQQDEADVSSCHGVCHATNMDPPLSF 50

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L7E8_CUCSA2.7e-22100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G146400 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700201821|gb|KGN56954.1|3.8e-22100.00hypothetical protein Csa_3G146400 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G146400.1Csa3G146400.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G146400CSPI03G12890Wild cucumber (PI 183967)cpicuB120
Csa3G146400CsGy3G013040Cucumber (Gy14) v2cgybcuB109
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G146400Wax gourdcuwgoB252
Csa3G146400Wax gourdcuwgoB269
Csa3G146400Wax gourdcuwgoB303
Csa3G146400Wax gourdcuwgoB346
Csa3G146400Cucumber (Chinese Long) v2cucuB050
Csa3G146400Cucumber (Gy14) v1cgycuB366
Csa3G146400Cucurbita maxima (Rimu)cmacuB007
Csa3G146400Cucurbita maxima (Rimu)cmacuB253
Csa3G146400Cucurbita maxima (Rimu)cmacuB355
Csa3G146400Cucurbita maxima (Rimu)cmacuB364
Csa3G146400Cucurbita maxima (Rimu)cmacuB814
Csa3G146400Cucurbita maxima (Rimu)cmacuB885
Csa3G146400Cucurbita moschata (Rifu)cmocuB239
Csa3G146400Cucurbita moschata (Rifu)cmocuB347
Csa3G146400Cucurbita moschata (Rifu)cmocuB353
Csa3G146400Cucurbita moschata (Rifu)cmocuB588
Csa3G146400Cucurbita moschata (Rifu)cmocuB806
Csa3G146400Cucurbita moschata (Rifu)cmocuB872
Csa3G146400Melon (DHL92) v3.5.1cumeB233
Csa3G146400Melon (DHL92) v3.5.1cumeB236
Csa3G146400Watermelon (Charleston Gray)cuwcgB183
Csa3G146400Watermelon (Charleston Gray)cuwcgB222
Csa3G146400Watermelon (Charleston Gray)cuwcgB246
Csa3G146400Watermelon (Charleston Gray)cuwcgB255
Csa3G146400Watermelon (97103) v1cuwmB189
Csa3G146400Watermelon (97103) v1cuwmB221
Csa3G146400Watermelon (97103) v1cuwmB233
Csa3G146400Watermelon (97103) v1cuwmB279
Csa3G146400Cucurbita pepo (Zucchini)cpecuB133
Csa3G146400Cucurbita pepo (Zucchini)cpecuB310
Csa3G146400Cucurbita pepo (Zucchini)cpecuB609
Csa3G146400Cucurbita pepo (Zucchini)cpecuB859
Csa3G146400Bottle gourd (USVL1VR-Ls)culsiB150
Csa3G146400Bottle gourd (USVL1VR-Ls)culsiB177
Csa3G146400Bottle gourd (USVL1VR-Ls)culsiB209
Csa3G146400Bottle gourd (USVL1VR-Ls)culsiB215
Csa3G146400Cucumber (Gy14) v2cgybcuB065
Csa3G146400Cucumber (Gy14) v2cgybcuB313
Csa3G146400Melon (DHL92) v3.6.1cumedB221
Csa3G146400Melon (DHL92) v3.6.1cumedB223
Csa3G146400Silver-seed gourdcarcuB0115
Csa3G146400Silver-seed gourdcarcuB0256
Csa3G146400Silver-seed gourdcarcuB0350
Csa3G146400Silver-seed gourdcarcuB0768
Csa3G146400Silver-seed gourdcarcuB0795
Csa3G146400Silver-seed gourdcarcuB0865
Csa3G146400Silver-seed gourdcarcuB0975
Csa3G146400Watermelon (97103) v2cuwmbB204
Csa3G146400Watermelon (97103) v2cuwmbB231
Csa3G146400Watermelon (97103) v2cuwmbB241
Csa3G146400Watermelon (97103) v2cuwmbB259