Csa3G146370 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G146370
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 9738757 .. 9739129 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCTTTACCGAAGGCAATTCGGAGCTTTGACCGAACTTGGAAAGCGAGAAATACAGAGGGAGGAACCACTCAACAAACAAAGTTCTCCACAATCCGCGGTTCTAATGGTGGGTGAGTTTTACGGGGGGAGAGGAAAACAAATGAGGGAAAGGAAAGTGAGAAAGAGCATCCAAAAATGTAAAGCACACCATGGTATCTGAACATTATGATGATCCACACAGAAACATGAGAATCCACATGAAAATCCTTTACTAGATTCCGATTATCAAAATCAAGCTAAGTGTTCCTTTTCAAAGGGCAACTTTTTTGCCACTCCATGTGCCAGTTATGTCTGCATTGAGCAGCAGGGGCCCTATTCACCAAAATTAA

mRNA sequence

ATGGAGCTTTACCGAAGGCAATTCGGAGCTTTGACCGAACTTGGAAAGCGAGAAATACAGAGGGAGGAACCACTCAACAAACAAAGTTCTCCACAATCCGCGGTTCTAATGGTGGGTGAGTTTTACGGGGGGAGAGGAAAACAAATGAGGGAAAGGAAAATTCCGATTATCAAAATCAAGCTAAGTGTTCCTTTTCAAAGGGCAACTTTTTTGCCACTCCATGTGCCAGTTATGTCTGCATTGAGCAGCAGGGGCCCTATTCACCAAAATTAA

Coding sequence (CDS)

ATGGAGCTTTACCGAAGGCAATTCGGAGCTTTGACCGAACTTGGAAAGCGAGAAATACAGAGGGAGGAACCACTCAACAAACAAAGTTCTCCACAATCCGCGGTTCTAATGGTGGGTGAGTTTTACGGGGGGAGAGGAAAACAAATGAGGGAAAGGAAAATTCCGATTATCAAAATCAAGCTAAGTGTTCCTTTTCAAAGGGCAACTTTTTTGCCACTCCATGTGCCAGTTATGTCTGCATTGAGCAGCAGGGGCCCTATTCACCAAAATTAA

Protein sequence

MELYRRQFGALTELGKREIQREEPLNKQSSPQSAVLMVGEFYGGRGKQMRERKIPIIKIKLSVPFQRATFLPLHVPVMSALSSRGPIHQN*
Homology
[Close]
BLAST of Csa3G146370 vs. TrEMBL
Match: A0A0A0LA61_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G146370 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.1e-42
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 1 

Query: 1  MELYRRQFGALTELGKREIQREEPLNKQSSPQSAVLMVGEFYGGRGKQMRERKIPIIKIK 60
          MELYRRQFGALTELGKREIQREEPLNKQSSPQSAVLMVGEFYGGRGKQMRERKIPIIKIK
Sbjct: 1  MELYRRQFGALTELGKREIQREEPLNKQSSPQSAVLMVGEFYGGRGKQMRERKIPIIKIK 60

Query: 61 LSVPFQRATFLPLHVPVMSALSSRGPIHQN 91
          LSVPFQRATFLPLHVPVMSALSSRGPIHQN
Sbjct: 61 LSVPFQRATFLPLHVPVMSALSSRGPIHQN 90

[Close]
BLAST of Csa3G146370 vs. NCBI nr
Match: gi|700201818|gb|KGN56951.1| (hypothetical protein Csa_3G146370 [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 1.6e-42
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 1 

Query: 1  MELYRRQFGALTELGKREIQREEPLNKQSSPQSAVLMVGEFYGGRGKQMRERKIPIIKIK 60
          MELYRRQFGALTELGKREIQREEPLNKQSSPQSAVLMVGEFYGGRGKQMRERKIPIIKIK
Sbjct: 1  MELYRRQFGALTELGKREIQREEPLNKQSSPQSAVLMVGEFYGGRGKQMRERKIPIIKIK 60

Query: 61 LSVPFQRATFLPLHVPVMSALSSRGPIHQN 91
          LSVPFQRATFLPLHVPVMSALSSRGPIHQN
Sbjct: 61 LSVPFQRATFLPLHVPVMSALSSRGPIHQN 90

The following BLAST results are available for this feature:
BLAST of Csa3G146370 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LA61_CUCSA1.1e-42100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G146370 PE=4 SV=1[more]
BLAST of Csa3G146370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201818|gb|KGN56951.1|1.6e-42100.00hypothetical protein Csa_3G146370 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G146370.1Csa3G146370.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G146370CSPI03G12860Wild cucumber (PI 183967)cpicuB120
Csa3G146370CsGy3G013010Cucumber (Gy14) v2cgybcuB109
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G146370Cucurbita pepo (Zucchini)cpecuB859
Csa3G146370Bottle gourd (USVL1VR-Ls)culsiB150
Csa3G146370Bottle gourd (USVL1VR-Ls)culsiB177
Csa3G146370Bottle gourd (USVL1VR-Ls)culsiB209
Csa3G146370Bottle gourd (USVL1VR-Ls)culsiB215
Csa3G146370Cucumber (Gy14) v2cgybcuB065
Csa3G146370Cucumber (Gy14) v2cgybcuB313
Csa3G146370Melon (DHL92) v3.6.1cumedB221
Csa3G146370Melon (DHL92) v3.6.1cumedB223
Csa3G146370Silver-seed gourdcarcuB0115
Csa3G146370Silver-seed gourdcarcuB0256
Csa3G146370Silver-seed gourdcarcuB0350
Csa3G146370Silver-seed gourdcarcuB0768
Csa3G146370Silver-seed gourdcarcuB0795
Csa3G146370Silver-seed gourdcarcuB0865
Csa3G146370Silver-seed gourdcarcuB0975
Csa3G146370Watermelon (97103) v2cuwmbB204
Csa3G146370Watermelon (97103) v2cuwmbB231
Csa3G146370Watermelon (97103) v2cuwmbB241
Csa3G146370Watermelon (97103) v2cuwmbB259
Csa3G146370Wax gourdcuwgoB252
Csa3G146370Wax gourdcuwgoB269
Csa3G146370Wax gourdcuwgoB303
Csa3G146370Wax gourdcuwgoB346
Csa3G146370Cucumber (Chinese Long) v2cucuB050
Csa3G146370Cucumber (Gy14) v1cgycuB366
Csa3G146370Cucurbita maxima (Rimu)cmacuB253
Csa3G146370Cucurbita maxima (Rimu)cmacuB355
Csa3G146370Cucurbita maxima (Rimu)cmacuB364
Csa3G146370Cucurbita maxima (Rimu)cmacuB814
Csa3G146370Cucurbita maxima (Rimu)cmacuB885
Csa3G146370Cucurbita moschata (Rifu)cmocuB239
Csa3G146370Cucurbita moschata (Rifu)cmocuB347
Csa3G146370Cucurbita moschata (Rifu)cmocuB353
Csa3G146370Cucurbita moschata (Rifu)cmocuB588
Csa3G146370Cucurbita moschata (Rifu)cmocuB806
Csa3G146370Cucurbita moschata (Rifu)cmocuB872
Csa3G146370Melon (DHL92) v3.5.1cumeB233
Csa3G146370Melon (DHL92) v3.5.1cumeB236
Csa3G146370Watermelon (Charleston Gray)cuwcgB183
Csa3G146370Watermelon (Charleston Gray)cuwcgB222
Csa3G146370Watermelon (Charleston Gray)cuwcgB246
Csa3G146370Watermelon (Charleston Gray)cuwcgB255
Csa3G146370Watermelon (97103) v1cuwmB189
Csa3G146370Watermelon (97103) v1cuwmB221
Csa3G146370Watermelon (97103) v1cuwmB233
Csa3G146370Watermelon (97103) v1cuwmB279
Csa3G146370Cucurbita pepo (Zucchini)cpecuB133
Csa3G146370Cucurbita pepo (Zucchini)cpecuB310
Csa3G146370Cucurbita pepo (Zucchini)cpecuB609