Csa3G144730 (gene) Cucumber (Chinese Long) v2

NameCsa3G144730
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 9624192 .. 9625586 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCCTTTAATTTATGGTATGTGGTACGTCCCCGAGGCTGCGCGATCAGAAACAGAACCGAATTAGAGGATAGAGAAAAACAGAGTAAAGAGAAAAAACAGAGTCTTTTTAAAAAAGGAAAGAGAACGGAGAAGATGGATGGGGGGGCAGGGTGCTCACAAGCCTTTTACACGTGATAAAGAAAACACCAAAAGCCACCTTGCATGCGTGTATAAAGCTTCTTCTTCATCATCATCTCTCTTTCTCCACGCTCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTCAAACCTCTCACACATTAAACCACCTCTCAACCCTCTTTTTGCTTTACCCTTCTTCACATTTTTCACCCATTTCCTATTTTACTCTCTTTTCTTCTGTTTTGTTTGTTCCAGTTTTGGTACCTCTCACTGCTTGATTGGATTGGTTTGGTTTTGGTTTTGGTTTTGGGTGAGTTTTTGTTTTGTGTCTTGTAATTCTGGGTTTTCTTCCTCTTCTTTACTGTTACTTCTTGTGGGCATTCAATGGGGCCTGCCTTTTATTTTTTTACATCATTAAATCTTTGGGTATTGGATGGATAGTGAGTTTACTACCCTTTTCAATGTTTATTCTTTGTCTTTGGATTTGTTCTTGATTTTTGTTTTCTTCTGGATGGTTTTATTCTCTGTCTCTGCCACTTCCCTAAGTTCCATATCTTCCTCTTCCTTTTAATACCATTTTTCTCTTCTTTTGTATATACTCCTCTTGCGTTTTTATCTGTTTGGGTTTACCCATCATCCCCATCGAGATTTTCGTTTCTAATAGCCAGACAACACTAGTAAATAGGTTTGTCTTATGGGTATTTCCGCTTTGGGTTTATTTTTCTGGGTTTTCTCCGTTTTATCTTGCTTCAATGGAAGATTTAGTCGAAATAAGATCTGGATTTCGAATTTCTGTCACTTTTTTTGGACTCTTCTCCTTGCATATGGGAATTTTCTAGCCGTCGGAGATGGGTTTTCTTTTATGCTATGTAGTATTGGTTCACTGTTCTATGAAAACGAAAGCTTCGTTTGGTTGAATTTGTTTTACCATGTTTTCTTTAGGGATATATATGGTGAAACAATGGTTTTTTTAATTGGGTTTTTGATTTAGCAAAGGAACAGTAATGCTTAAAAATGTAGAAGAAACGGCCAAAATTTTATTCCGCTTTCAACTTTACTTTGCGTATGAAACAATGGATGTATTTCTCTGTATCATTGTCTCTGTTTTTTTAACCTTTTGAAGAATTTTTCGTCATCTTGTTTGCTGACATGCAATTTTCCTCTTCTGGGTTCTTTTTTTTTTCACCTCCTCAGCAGGATGACGTCTTGAATCCGTGA

mRNA sequence

ATGCTTCCTTTAATTTATGGTATGTGGGTGCTCACAAGCCTTTTACACGTGATAAAGAAAACACCAAAAGCCACCTTGCATGCGTGTATAAAGCTTCTTCTTCATCATCATCTCTCTTTCTCCACGCTCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTCAAACCTCTCACACATTAAACCACCTCTCAACCCTCTTTTTGCTTTACCCTTCTTCACATTTTTCACCCATTTCCTATTTTACTCTCTTTTCTTCTGTTTTGTTTGTTCCAGTTTTGGTACCTCTCACTGCTTGATTGGATTGGTTTGGTTTTGGTTTTGGTTTTGGCAGGATGACGTCTTGAATCCGTGA

Coding sequence (CDS)

ATGCTTCCTTTAATTTATGGTATGTGGGTGCTCACAAGCCTTTTACACGTGATAAAGAAAACACCAAAAGCCACCTTGCATGCGTGTATAAAGCTTCTTCTTCATCATCATCTCTCTTTCTCCACGCTCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTCAAACCTCTCACACATTAAACCACCTCTCAACCCTCTTTTTGCTTTACCCTTCTTCACATTTTTCACCCATTTCCTATTTTACTCTCTTTTCTTCTGTTTTGTTTGTTCCAGTTTTGGTACCTCTCACTGCTTGATTGGATTGGTTTGGTTTTGGTTTTGGTTTTGGCAGGATGACGTCTTGAATCCGTGA

Protein sequence

MLPLIYGMWVLTSLLHVIKKTPKATLHACIKLLLHHHLSFSTLFSSSSSSSSSSSSSSSSSSSFSNLSHIKPPLNPLFALPFFTFFTHFLFYSLFFCFVCSSFGTSHCLIGLVWFWFWFWQDDVLNP*
BLAST of Csa3G144730 vs. TrEMBL
Match: A0A0A0L7C9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G144730 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 2.5e-69
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1

Query: 1   MLPLIYGMWVLTSLLHVIKKTPKATLHACIKLLLHHHLSFSTLFSSSSSSSSSSSSSSSS 60
           MLPLIYGMWVLTSLLHVIKKTPKATLHACIKLLLHHHLSFSTLFSSSSSSSSSSSSSSSS
Sbjct: 1   MLPLIYGMWVLTSLLHVIKKTPKATLHACIKLLLHHHLSFSTLFSSSSSSSSSSSSSSSS 60

Query: 61  SSSFSNLSHIKPPLNPLFALPFFTFFTHFLFYSLFFCFVCSSFGTSHCLIGLVWFWFWFW 120
           SSSFSNLSHIKPPLNPLFALPFFTFFTHFLFYSLFFCFVCSSFGTSHCLIGLVWFWFWFW
Sbjct: 61  SSSFSNLSHIKPPLNPLFALPFFTFFTHFLFYSLFFCFVCSSFGTSHCLIGLVWFWFWFW 120

Query: 121 QDDVLNP 128
           QDDVLNP
Sbjct: 121 QDDVLNP 127

BLAST of Csa3G144730 vs. TrEMBL
Match: A0A0G4GRD4_9ALVE (Uncharacterized protein OS=Chromera velia CCMP2878 GN=Cvel_5086 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.0e-06
Identity = 41/82 (50.00%), Postives = 50/82 (60.98%), Query Frame = 1

Query: 39  SFSTLFSSSSSSSSSSSSSSSSSSSFSNLSHIKPPLNPLFALPFFTFFTHFLFYSLFFCF 98
           SFS+ FSSSSS S SSSSSSSSSSS S  S    P + +F   FF FF  FLF+ LFF F
Sbjct: 230 SFSSSFSSSSSFSFSSSSSSSSSSSSSPSSSSSSPSSSIFFF-FFFFFFFFLFFFLFFFF 289

Query: 99  VCSSFGTSHCLIGLVWFWFWFW 121
           +   F        L +F+F+F+
Sbjct: 290 LFFFF--------LFFFFFFFF 302

BLAST of Csa3G144730 vs. TrEMBL
Match: A0A0G4GRD4_9ALVE (Uncharacterized protein OS=Chromera velia CCMP2878 GN=Cvel_5086 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.7e-04
Identity = 40/93 (43.01%), Postives = 51/93 (54.84%), Query Frame = 1

Query: 28  ACIKLLLHHHLSFSTLFSSSSSSSSSSSSSSSSSSSFSNLSHIKPPLNPLFALPFFTFFT 87
           +C         S S+ FS SSSSSSSSSSSSS SSS S+      P + +F   FF FF 
Sbjct: 225 SCSSSSFSSSFSSSSSFSFSSSSSSSSSSSSSPSSSSSS------PSSSIFFF-FFFFFF 284

Query: 88  HFLFYSLFFCFVCSSFGTSHCLIGLVWFWFWFW 121
            FLF+ LFF F+   F        L +F+F+F+
Sbjct: 285 FFLFFFLFFFFLFFFF--------LFFFFFFFF 302


HSP 2 Score: 47.0 bits (110), Expect = 2.0e-02
Identity = 40/96 (41.67%), Postives = 49/96 (51.04%), Query Frame = 1

Query: 39  SFSTLFSSSSSSSS--------------SSSSSSSSSSSFSNLSHIKPPLNPLFALPFFT 98
           S S+  SSSS SSS              SSSSSSSSSSS S  S    P + +F   FF 
Sbjct: 216 SSSSCSSSSSCSSSSFSSSFSSSSSFSFSSSSSSSSSSSSSPSSSSSSPSSSIFFF-FFF 275

Query: 99  FFTHFLFYSLFFCFVCSSFGTSHCLIGLVWFWFWFW 121
           FF  FLF+ LFF F+   F        L +F+F+F+
Sbjct: 276 FFFFFLFFFLFFFFLFFFF--------LFFFFFFFF 302


HSP 3 Score: 39.7 bits (91), Expect = 3.2e+00
Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 1

Query: 39  SFSTLFSSSSSSSSSSSSSSSSSSSFSNLS 69
           S S+  SSSSSSSSSSSSSSSSSSSF++ S
Sbjct: 149 SSSSSSSSSSSSSSSSSSSSSSSSSFASFS 178


HSP 4 Score: 38.9 bits (89), Expect = 5.5e+00
Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 1

Query: 39  SFSTLFSSSSSSSSSSSSSSSSSSSFSNLS 69
           +FS+  SSSSSSSSSSSSSSSSSSS S+ S
Sbjct: 137 AFSSSSSSSSSSSSSSSSSSSSSSSSSSSS 166


HSP 5 Score: 38.5 bits (88), Expect = 7.2e+00
Identity = 23/30 (76.67%), Postives = 25/30 (83.33%), Query Frame = 1

Query: 39  SFSTLFSSSSSSSSSSSSSSSSSSSFSNLS 69
           SFS+  SSSSSSSSSSSSSSSSSS  S+ S
Sbjct: 183 SFSSASSSSSSSSSSSSSSSSSSSCSSSSS 212


HSP 6 Score: 37.0 bits (84), Expect = 2.1e+01
Identity = 24/33 (72.73%), Postives = 27/33 (81.82%), Query Frame = 1

Query: 39  SF---STLFSSSSSSSSSSSSSSSSSSSFSNLS 69
           SF   S+ FSS+SSSSSSSSSSSSSSSS S+ S
Sbjct: 176 SFSCSSSSFSSASSSSSSSSSSSSSSSSSSSCS 208


HSP 7 Score: 35.4 bits (80), Expect = 6.1e+01
Identity = 21/32 (65.62%), Postives = 25/32 (78.12%), Query Frame = 1

Query: 37  HLSFSTLFSSSSSSSSSSSSSSSSSSSFSNLS 69
           +L+    F+ SSSSSSSSSSSSSSSSS S+ S
Sbjct: 129 NLTSKECFAFSSSSSSSSSSSSSSSSSSSSSS 160


HSP 8 Score: 34.3 bits (77), Expect = 1.4e+02
Identity = 34/104 (32.69%), Postives = 45/104 (43.27%), Query Frame = 1

Query: 39  SFSTLFSSSSSSSSSSSSSSSSSSSFS---------NLSHIKPPLNPLFALPFFT----- 98
           S S+  SS SSSSS SSSSS SSSSFS         + S      +   + P  +     
Sbjct: 206 SCSSSSSSCSSSSSCSSSSSCSSSSFSSSFSSSSSFSFSSSSSSSSSSSSSPSSSSSSPS 265

Query: 99  ---FFTHFLFYSLFFCFVCSSFGTSHCLIGLVWFWFWFWQDDVL 126
              FF  F F+  F  F    F      +   +F+F+F   D+L
Sbjct: 266 SSIFFFFFFFFFFFLFFFLFFFFLFFFFLFFFFFFFFFLFFDLL 309


HSP 9 Score: 32.7 bits (73), Expect = 3.9e+02
Identity = 20/30 (66.67%), Postives = 23/30 (76.67%), Query Frame = 1

Query: 39  SFSTLFSSSSSSSSSSSSSSSSSSSFSNLS 69
           S S+  SSSSSSSSS +S S SSSSFS+ S
Sbjct: 159 SSSSSSSSSSSSSSSFASFSCSSSSFSSAS 188


HSP 10 Score: 31.2 bits (69), Expect = 1.1e+03
Identity = 19/30 (63.33%), Postives = 23/30 (76.67%), Query Frame = 1

Query: 39  SFSTLFSSSSSSSSSSSSSSSSSSSFSNLS 69
           S S+ F+S S SSSS SS+SSSSSS S+ S
Sbjct: 169 SSSSSFASFSCSSSSFSSASSSSSSSSSSS 198

BLAST of Csa3G144730 vs. NCBI nr
Match: gi|700201801|gb|KGN56934.1| (hypothetical protein Csa_3G144730 [Cucumis sativus])

HSP 1 Score: 269.2 bits (687), Expect = 3.6e-69
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1

Query: 1   MLPLIYGMWVLTSLLHVIKKTPKATLHACIKLLLHHHLSFSTLFSSSSSSSSSSSSSSSS 60
           MLPLIYGMWVLTSLLHVIKKTPKATLHACIKLLLHHHLSFSTLFSSSSSSSSSSSSSSSS
Sbjct: 1   MLPLIYGMWVLTSLLHVIKKTPKATLHACIKLLLHHHLSFSTLFSSSSSSSSSSSSSSSS 60

Query: 61  SSSFSNLSHIKPPLNPLFALPFFTFFTHFLFYSLFFCFVCSSFGTSHCLIGLVWFWFWFW 120
           SSSFSNLSHIKPPLNPLFALPFFTFFTHFLFYSLFFCFVCSSFGTSHCLIGLVWFWFWFW
Sbjct: 61  SSSFSNLSHIKPPLNPLFALPFFTFFTHFLFYSLFFCFVCSSFGTSHCLIGLVWFWFWFW 120

Query: 121 QDDVLNP 128
           QDDVLNP
Sbjct: 121 QDDVLNP 127

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L7C9_CUCSA2.5e-69100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G144730 PE=4 SV=1[more]
A0A0G4GRD4_9ALVE3.0e-0650.00Uncharacterized protein OS=Chromera velia CCMP2878 GN=Cvel_5086 PE=4 SV=1[more]
A0A0G4GRD4_9ALVE3.7e-0443.01Uncharacterized protein OS=Chromera velia CCMP2878 GN=Cvel_5086 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700201801|gb|KGN56934.1|3.6e-69100.00hypothetical protein Csa_3G144730 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU165372cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G144730.1Csa3G144730.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU165372CU165372transcribed_cluster


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G144730Watermelon (97103) v1cuwmB189
Csa3G144730Watermelon (97103) v1cuwmB221
Csa3G144730Watermelon (97103) v1cuwmB233
Csa3G144730Watermelon (97103) v1cuwmB279
Csa3G144730Cucurbita pepo (Zucchini)cpecuB133
Csa3G144730Cucurbita pepo (Zucchini)cpecuB310
Csa3G144730Cucurbita pepo (Zucchini)cpecuB609
Csa3G144730Cucurbita pepo (Zucchini)cpecuB859
Csa3G144730Bottle gourd (USVL1VR-Ls)culsiB150
Csa3G144730Bottle gourd (USVL1VR-Ls)culsiB209
Csa3G144730Bottle gourd (USVL1VR-Ls)culsiB215
Csa3G144730Cucumber (Gy14) v2cgybcuB065
Csa3G144730Cucumber (Gy14) v2cgybcuB109
Csa3G144730Melon (DHL92) v3.6.1cumedB221
Csa3G144730Melon (DHL92) v3.6.1cumedB223
Csa3G144730Silver-seed gourdcarcuB0256
Csa3G144730Silver-seed gourdcarcuB0262
Csa3G144730Silver-seed gourdcarcuB0350
Csa3G144730Silver-seed gourdcarcuB0768
Csa3G144730Silver-seed gourdcarcuB0795
Csa3G144730Silver-seed gourdcarcuB0975
Csa3G144730Watermelon (97103) v2cuwmbB204
Csa3G144730Watermelon (97103) v2cuwmbB231
Csa3G144730Watermelon (97103) v2cuwmbB241
Csa3G144730Watermelon (97103) v2cuwmbB259
Csa3G144730Wax gourdcuwgoB262
Csa3G144730Wax gourdcuwgoB269
Csa3G144730Wax gourdcuwgoB303
Csa3G144730Cucumber (Chinese Long) v2cucuB050
Csa3G144730Cucumber (Chinese Long) v2cucuB053
Csa3G144730Cucumber (Chinese Long) v2cucuB054
Csa3G144730Cucumber (Gy14) v1cgycuB366
Csa3G144730Cucumber (Gy14) v1cgycuB544
Csa3G144730Cucurbita maxima (Rimu)cmacuB253
Csa3G144730Cucurbita maxima (Rimu)cmacuB355
Csa3G144730Cucurbita maxima (Rimu)cmacuB814
Csa3G144730Cucurbita maxima (Rimu)cmacuB885
Csa3G144730Cucurbita moschata (Rifu)cmocuB239
Csa3G144730Cucurbita moschata (Rifu)cmocuB347
Csa3G144730Cucurbita moschata (Rifu)cmocuB588
Csa3G144730Cucurbita moschata (Rifu)cmocuB806
Csa3G144730Cucurbita moschata (Rifu)cmocuB872
Csa3G144730Melon (DHL92) v3.5.1cumeB233
Csa3G144730Melon (DHL92) v3.5.1cumeB235
Csa3G144730Melon (DHL92) v3.5.1cumeB236
Csa3G144730Watermelon (Charleston Gray)cuwcgB183
Csa3G144730Watermelon (Charleston Gray)cuwcgB222
Csa3G144730Watermelon (Charleston Gray)cuwcgB246
Csa3G144730Watermelon (Charleston Gray)cuwcgB255