Csa3G144160 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G144160
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 9557727 .. 9557942 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAACTTCCGGGGCCCTTATTTTGGGCCTGACTACAAAAGAATGTTGAGAATTGGGCTCAGAAATTGGGGGTAAAATTCGTGGGCCGTTGGTGGTTTATCTCATTTGACATTTTGGAGCAGATTGAATCTGCATCTTCGTGCCCTAATTCGATTTCCAGCTTCCCGATTGCCAAAGAATCGGATCGGATCGGATTGCCGTTGCCGTCGCTGA

mRNA sequence

ATGCAAAACTTCCGGGGCCCTTATTTTGGGCCTGACTACAAAAGAATGTTGAGAATTGGGCTCAGAAATTGGGGATTGAATCTGCATCTTCGTGCCCTAATTCGATTTCCAGCTTCCCGATTGCCAAAGAATCGGATCGGATCGGATTGCCGTTGCCGTCGCTGA

Coding sequence (CDS)

ATGCAAAACTTCCGGGGCCCTTATTTTGGGCCTGACTACAAAAGAATGTTGAGAATTGGGCTCAGAAATTGGGGATTGAATCTGCATCTTCGTGCCCTAATTCGATTTCCAGCTTCCCGATTGCCAAAGAATCGGATCGGATCGGATTGCCGTTGCCGTCGCTGA

Protein sequence

MQNFRGPYFGPDYKRMLRIGLRNWGLNLHLRALIRFPASRLPKNRIGSDCRCRR*
Homology
[Close]
BLAST of Csa3G144160 vs. TrEMBL
Match: A0A0A0LA30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G144160 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.1e-24
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 1 

Query: 1  MQNFRGPYFGPDYKRMLRIGLRNWGLNLHLRALIRFPASRLPKNRIGSDCRCRR 55
          MQNFRGPYFGPDYKRMLRIGLRNWGLNLHLRALIRFPASRLPKNRIGSDCRCRR
Sbjct: 1  MQNFRGPYFGPDYKRMLRIGLRNWGLNLHLRALIRFPASRLPKNRIGSDCRCRR 54

[Close]
BLAST of Csa3G144160 vs. NCBI nr
Match: gi|700201793|gb|KGN56926.1| (hypothetical protein Csa_3G144160 [Cucumis sativus])

HSP 1 Score: 119.8 bits (299), Expect = 1.5e-24
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 1 

Query: 1  MQNFRGPYFGPDYKRMLRIGLRNWGLNLHLRALIRFPASRLPKNRIGSDCRCRR 55
          MQNFRGPYFGPDYKRMLRIGLRNWGLNLHLRALIRFPASRLPKNRIGSDCRCRR
Sbjct: 1  MQNFRGPYFGPDYKRMLRIGLRNWGLNLHLRALIRFPASRLPKNRIGSDCRCRR 54

The following BLAST results are available for this feature:
BLAST of Csa3G144160 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LA30_CUCSA1.1e-24100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G144160 PE=4 SV=1[more]
BLAST of Csa3G144160 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201793|gb|KGN56926.1|1.5e-24100.00hypothetical protein Csa_3G144160 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G144160.1Csa3G144160.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G144160Watermelon (97103) v2cuwmbB204
Csa3G144160Watermelon (97103) v2cuwmbB231
Csa3G144160Watermelon (97103) v2cuwmbB241
Csa3G144160Watermelon (97103) v2cuwmbB259
Csa3G144160Wax gourdcuwgoB262
Csa3G144160Wax gourdcuwgoB269
Csa3G144160Wax gourdcuwgoB303
Csa3G144160Cucumber (Chinese Long) v2cucuB050
Csa3G144160Cucumber (Chinese Long) v2cucuB053
Csa3G144160Cucumber (Chinese Long) v2cucuB054
Csa3G144160Cucumber (Gy14) v1cgycuB366
Csa3G144160Cucumber (Gy14) v1cgycuB544
Csa3G144160Cucurbita maxima (Rimu)cmacuB253
Csa3G144160Cucurbita maxima (Rimu)cmacuB355
Csa3G144160Cucurbita maxima (Rimu)cmacuB814
Csa3G144160Cucurbita maxima (Rimu)cmacuB885
Csa3G144160Cucurbita moschata (Rifu)cmocuB239
Csa3G144160Cucurbita moschata (Rifu)cmocuB347
Csa3G144160Cucurbita moschata (Rifu)cmocuB588
Csa3G144160Cucurbita moschata (Rifu)cmocuB806
Csa3G144160Cucurbita moschata (Rifu)cmocuB872
Csa3G144160Melon (DHL92) v3.5.1cumeB233
Csa3G144160Melon (DHL92) v3.5.1cumeB235
Csa3G144160Melon (DHL92) v3.5.1cumeB236
Csa3G144160Watermelon (Charleston Gray)cuwcgB183
Csa3G144160Watermelon (Charleston Gray)cuwcgB222
Csa3G144160Watermelon (Charleston Gray)cuwcgB246
Csa3G144160Watermelon (Charleston Gray)cuwcgB255
Csa3G144160Watermelon (97103) v1cuwmB189
Csa3G144160Watermelon (97103) v1cuwmB221
Csa3G144160Watermelon (97103) v1cuwmB233
Csa3G144160Watermelon (97103) v1cuwmB279
Csa3G144160Cucurbita pepo (Zucchini)cpecuB133
Csa3G144160Cucurbita pepo (Zucchini)cpecuB310
Csa3G144160Cucurbita pepo (Zucchini)cpecuB609
Csa3G144160Cucurbita pepo (Zucchini)cpecuB859
Csa3G144160Bottle gourd (USVL1VR-Ls)culsiB150
Csa3G144160Bottle gourd (USVL1VR-Ls)culsiB209
Csa3G144160Bottle gourd (USVL1VR-Ls)culsiB215
Csa3G144160Cucumber (Gy14) v2cgybcuB065
Csa3G144160Cucumber (Gy14) v2cgybcuB109
Csa3G144160Melon (DHL92) v3.6.1cumedB221
Csa3G144160Melon (DHL92) v3.6.1cumedB223
Csa3G144160Silver-seed gourdcarcuB0256
Csa3G144160Silver-seed gourdcarcuB0262
Csa3G144160Silver-seed gourdcarcuB0350
Csa3G144160Silver-seed gourdcarcuB0795
Csa3G144160Silver-seed gourdcarcuB0975