Csa3G141790 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCCAGCTTTTCAAGCCCCTTCTGGCTCACCTCCTCTGTTTACCTATACCCACCATCGCGGCCCTCCCAGGGCACGCCGCCGCCGGTGGCCTCGTCTTGGCACTAGCCCACGACTATCTGGTCATGAGGAGCGACCGAGGCGTGCTGTACATGAGCGAGCTGGACTTGGGTGCCACTCTGCCGGACTACTTCATAGCGCTGGCTAAGTCCAAGATTGGGTCAAGCTCGGTGAGGCGGGATGTGTTTTTGAGGGGGATGAAAGTGAGAGGTGAGACGGCGGTGAAGATGGGGTTGGCGGAATCTGCACACCAGGGGGAGGATGGCGTCATGGAGGCGGCAGTGCGGCTTGGGGAGGAGCTGGCGGCGAGGAATTGGGATGGGGATGTTTATGCAGAGATTAGGAAGAGCTTGTACCCTGAAATCTCTGGGTTGCTTGGATTGACCACGAAGGTCATTACAATTTCCAAGCTTTGA ATGATCCAGCTTTTCAAGCCCCTTCTGGCTCACCTCCTCTGTTTACCTATACCCACCATCGCGGCCCTCCCAGGGCACGCCGCCGCCGGTGGCCTCGTCTTGGCACTAGCCCACGACTATCTGGTCATGAGGAGCGACCGAGGCGTGCTGTACATGAGCGAGCTGGACTTGGGTGCCACTCTGCCGGACTACTTCATAGCGCTGGCTAAGTCCAAGATTGGGTCAAGCTCGGTGAGGCGGGATGTGTTTTTGAGGGGGATGAAAGTGAGAGGTGAGACGGCGGTGAAGATGGGGTTGGCGGAATCTGCACACCAGGGGGAGGATGGCGTCATGGAGGCGGCAGTGCGGCTTGGGGAGGAGCTGGCGGCGAGGAATTGGGATGGGGATGTTTATGCAGAGATTAGGAAGAGCTTGTACCCTGAAATCTCTGGGTTGCTTGGATTGACCACGAAGGTCATTACAATTTCCAAGCTTTGA ATGATCCAGCTTTTCAAGCCCCTTCTGGCTCACCTCCTCTGTTTACCTATACCCACCATCGCGGCCCTCCCAGGGCACGCCGCCGCCGGTGGCCTCGTCTTGGCACTAGCCCACGACTATCTGGTCATGAGGAGCGACCGAGGCGTGCTGTACATGAGCGAGCTGGACTTGGGTGCCACTCTGCCGGACTACTTCATAGCGCTGGCTAAGTCCAAGATTGGGTCAAGCTCGGTGAGGCGGGATGTGTTTTTGAGGGGGATGAAAGTGAGAGGTGAGACGGCGGTGAAGATGGGGTTGGCGGAATCTGCACACCAGGGGGAGGATGGCGTCATGGAGGCGGCAGTGCGGCTTGGGGAGGAGCTGGCGGCGAGGAATTGGGATGGGGATGTTTATGCAGAGATTAGGAAGAGCTTGTACCCTGAAATCTCTGGGTTGCTTGGATTGACCACGAAGGTCATTACAATTTCCAAGCTTTGA MIQLFKPLLAHLLCLPIPTIAALPGHAAAGGLVLALAHDYLVMRSDRGVLYMSELDLGATLPDYFIALAKSKIGSSSVRRDVFLRGMKVRGETAVKMGLAESAHQGEDGVMEAAVRLGEELAARNWDGDVYAEIRKSLYPEISGLLGLTTKVITISKL*
BLAST of Csa3G141790 vs. Swiss-Prot
Match: ECI2_ARATH (Enoyl-CoA delta isomerase 2, peroxisomal OS=Arabidopsis thaliana GN=ECI2 PE=1 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 9.4e-51 Identity = 97/159 (61.01%), Postives = 127/159 (79.87%), Query Frame = 1
BLAST of Csa3G141790 vs. Swiss-Prot
Match: ECI3_ARATH (Enoyl-CoA delta isomerase 3 OS=Arabidopsis thaliana GN=ECI3 PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 5.9e-45 Identity = 90/159 (56.60%), Postives = 116/159 (72.96%), Query Frame = 1
BLAST of Csa3G141790 vs. Swiss-Prot
Match: ECI1_ARATH (Enoyl-CoA delta isomerase 1, peroxisomal OS=Arabidopsis thaliana GN=ECI1 PE=1 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 3.9e-33 Identity = 68/137 (49.64%), Postives = 96/137 (70.07%), Query Frame = 1
BLAST of Csa3G141790 vs. Swiss-Prot
Match: FADJ_YERE8 (Fatty acid oxidation complex subunit alpha OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) GN=fadJ PE=3 SV=2) HSP 1 Score: 53.9 bits (128), Expect = 1.8e-06 Identity = 37/117 (31.62%), Postives = 59/117 (50.43%), Query Frame = 1
BLAST of Csa3G141790 vs. TrEMBL
Match: A0A0A0L566_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141790 PE=4 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 7.9e-81 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1
BLAST of Csa3G141790 vs. TrEMBL
Match: A0A0A0L8C7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141780 PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 5.9e-60 Identity = 118/158 (74.68%), Postives = 138/158 (87.34%), Query Frame = 1
BLAST of Csa3G141790 vs. TrEMBL
Match: A0A0A0L9X4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141770 PE=4 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 1.2e-57 Identity = 113/158 (71.52%), Postives = 134/158 (84.81%), Query Frame = 1
BLAST of Csa3G141790 vs. TrEMBL
Match: A0A059AUF5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00183 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 5.0e-51 Identity = 100/158 (63.29%), Postives = 126/158 (79.75%), Query Frame = 1
BLAST of Csa3G141790 vs. TrEMBL
Match: V4MKX3_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10027007mg PE=4 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 1.9e-50 Identity = 99/159 (62.26%), Postives = 129/159 (81.13%), Query Frame = 1
BLAST of Csa3G141790 vs. TAIR10
Match: AT4G14430.1 (AT4G14430.1 indole-3-butyric acid response 10) HSP 1 Score: 201.1 bits (510), Expect = 5.3e-52 Identity = 97/159 (61.01%), Postives = 127/159 (79.87%), Query Frame = 1
BLAST of Csa3G141790 vs. TAIR10
Match: AT4G14440.1 (AT4G14440.1 3-hydroxyacyl-CoA dehydratase 1) HSP 1 Score: 181.8 bits (460), Expect = 3.3e-46 Identity = 90/159 (56.60%), Postives = 116/159 (72.96%), Query Frame = 1
BLAST of Csa3G141790 vs. TAIR10
Match: AT1G65520.1 (AT1G65520.1 delta(3), delta(2)-enoyl CoA isomerase 1) HSP 1 Score: 142.5 bits (358), Expect = 2.2e-34 Identity = 68/137 (49.64%), Postives = 96/137 (70.07%), Query Frame = 1
BLAST of Csa3G141790 vs. NCBI nr
Match: gi|449432588|ref|XP_004134081.1| (PREDICTED: 3-hydroxybutyryl-CoA dehydratase-like protein, mitochondrial [Cucumis sativus]) HSP 1 Score: 307.8 bits (787), Expect = 1.1e-80 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1
BLAST of Csa3G141790 vs. NCBI nr
Match: gi|700201750|gb|KGN56883.1| (hypothetical protein Csa_3G141790 [Cucumis sativus]) HSP 1 Score: 307.8 bits (787), Expect = 1.1e-80 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1
BLAST of Csa3G141790 vs. NCBI nr
Match: gi|659076206|ref|XP_008438557.1| (PREDICTED: uncharacterized protein LOC103483622 [Cucumis melo]) HSP 1 Score: 284.6 bits (727), Expect = 1.0e-73 Identity = 145/158 (91.77%), Postives = 150/158 (94.94%), Query Frame = 1
BLAST of Csa3G141790 vs. NCBI nr
Match: gi|449432586|ref|XP_004134080.1| (PREDICTED: 3-hydroxybutyryl-CoA dehydratase-like protein, mitochondrial [Cucumis sativus]) HSP 1 Score: 238.4 bits (607), Expect = 8.4e-60 Identity = 118/158 (74.68%), Postives = 138/158 (87.34%), Query Frame = 1
BLAST of Csa3G141790 vs. NCBI nr
Match: gi|659076208|ref|XP_008438558.1| (PREDICTED: enoyl-CoA hydratase domain-containing protein 2, mitochondrial-like [Cucumis melo]) HSP 1 Score: 238.4 bits (607), Expect = 8.4e-60 Identity = 119/158 (75.32%), Postives = 138/158 (87.34%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |