Csa3G127090 (gene) Cucumber (Chinese Long) v2

NameCsa3G127090
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 7981088 .. 7981267 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGAATCAACTCCATCCGAATCTCGGCCTACGTGTCGTCTACGGTTTATCTAAAAGGTCAAAGTTACATGTCGTTTTATCAAGACGACATGTAGTTTCAGTGTCAGCTTCCTTCCAAAAACCCACGCTTAGAAGAGCAAACAAACGTAAAGCGCCAAAGCCCGAGTCTGGTAGCTGA

mRNA sequence

ATGACGAATCAACTCCATCCGAATCTCGGCCTACGTGTCGTCTACGGTTTATCTAAAAGGTCAAAGTTACATGTCGTTTTATCAAGACGACATGTAGTTTCAGTGTCAGCTTCCTTCCAAAAACCCACGCTTAGAAGAGCAAACAAACGTAAAGCGCCAAAGCCCGAGTCTGGTAGCTGA

Coding sequence (CDS)

ATGACGAATCAACTCCATCCGAATCTCGGCCTACGTGTCGTCTACGGTTTATCTAAAAGGTCAAAGTTACATGTCGTTTTATCAAGACGACATGTAGTTTCAGTGTCAGCTTCCTTCCAAAAACCCACGCTTAGAAGAGCAAACAAACGTAAAGCGCCAAAGCCCGAGTCTGGTAGCTGA

Protein sequence

MTNQLHPNLGLRVVYGLSKRSKLHVVLSRRHVVSVSASFQKPTLRRANKRKAPKPESGS*
BLAST of Csa3G127090 vs. TrEMBL
Match: A0A0A0L964_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G127090 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 2.6e-24
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1

Query: 1  MTNQLHPNLGLRVVYGLSKRSKLHVVLSRRHVVSVSASFQKPTLRRANKRKAPKPESGS 60
          MTNQLHPNLGLRVVYGLSKRSKLHVVLSRRHVVSVSASFQKPTLRRANKRKAPKPESGS
Sbjct: 1  MTNQLHPNLGLRVVYGLSKRSKLHVVLSRRHVVSVSASFQKPTLRRANKRKAPKPESGS 59

BLAST of Csa3G127090 vs. NCBI nr
Match: gi|700201513|gb|KGN56646.1| (hypothetical protein Csa_3G127090 [Cucumis sativus])

HSP 1 Score: 118.6 bits (296), Expect = 3.7e-24
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1

Query: 1  MTNQLHPNLGLRVVYGLSKRSKLHVVLSRRHVVSVSASFQKPTLRRANKRKAPKPESGS 60
          MTNQLHPNLGLRVVYGLSKRSKLHVVLSRRHVVSVSASFQKPTLRRANKRKAPKPESGS
Sbjct: 1  MTNQLHPNLGLRVVYGLSKRSKLHVVLSRRHVVSVSASFQKPTLRRANKRKAPKPESGS 59

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L964_CUCSA2.6e-24100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G127090 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700201513|gb|KGN56646.1|3.7e-24100.00hypothetical protein Csa_3G127090 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU128103cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G127090.1Csa3G127090.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU128103CU128103transcribed_cluster


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G127090CSPI03G09980Wild cucumber (PI 183967)cpicuB120
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G127090Cucumber (Chinese Long) v2cucuB088
Csa3G127090Cucumber (Chinese Long) v2cucuB089
Csa3G127090Cucumber (Chinese Long) v2cucuB111
Csa3G127090Cucumber (Gy14) v1cgycuB366
Csa3G127090Cucumber (Gy14) v1cgycuB460
Csa3G127090Cucumber (Gy14) v1cgycuB509
Csa3G127090Cucurbita maxima (Rimu)cmacuB253
Csa3G127090Cucurbita maxima (Rimu)cmacuB357
Csa3G127090Cucurbita maxima (Rimu)cmacuB822
Csa3G127090Cucurbita maxima (Rimu)cmacuB814
Csa3G127090Cucurbita maxima (Rimu)cmacuB892
Csa3G127090Cucurbita moschata (Rifu)cmocuB239
Csa3G127090Cucurbita moschata (Rifu)cmocuB348
Csa3G127090Cucurbita moschata (Rifu)cmocuB806
Csa3G127090Cucurbita moschata (Rifu)cmocuB878
Csa3G127090Melon (DHL92) v3.5.1cumeB182
Csa3G127090Melon (DHL92) v3.5.1cumeB236
Csa3G127090Watermelon (Charleston Gray)cuwcgB222
Csa3G127090Watermelon (Charleston Gray)cuwcgB242
Csa3G127090Watermelon (97103) v1cuwmB187
Csa3G127090Watermelon (97103) v1cuwmB207
Csa3G127090Watermelon (97103) v1cuwmB233
Csa3G127090Watermelon (97103) v1cuwmB276
Csa3G127090Cucurbita pepo (Zucchini)cpecuB135
Csa3G127090Cucurbita pepo (Zucchini)cpecuB309
Csa3G127090Cucurbita pepo (Zucchini)cpecuB609
Csa3G127090Cucurbita pepo (Zucchini)cpecuB859
Csa3G127090Bottle gourd (USVL1VR-Ls)culsiB154
Csa3G127090Bottle gourd (USVL1VR-Ls)culsiB209
Csa3G127090Bottle gourd (USVL1VR-Ls)culsiB232
Csa3G127090Cucumber (Gy14) v2cgybcuB109
Csa3G127090Cucumber (Gy14) v2cgybcuB114
Csa3G127090Cucumber (Gy14) v2cgybcuB116
Csa3G127090Cucumber (Gy14) v2cgybcuB256
Csa3G127090Melon (DHL92) v3.6.1cumedB167
Csa3G127090Melon (DHL92) v3.6.1cumedB223
Csa3G127090Silver-seed gourdcarcuB0257
Csa3G127090Silver-seed gourdcarcuB0644
Csa3G127090Silver-seed gourdcarcuB0975
Csa3G127090Silver-seed gourdcarcuB1091
Csa3G127090Watermelon (97103) v2cuwmbB204
Csa3G127090Watermelon (97103) v2cuwmbB185
Csa3G127090Watermelon (97103) v2cuwmbB227
Csa3G127090Wax gourdcuwgoB259
Csa3G127090Wax gourdcuwgoB270