Csa3G127000 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G127000
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 7938594 .. 7938830 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATATAAAAGATGTATATGAGCATATAAACAGGAGATGGATCTCTGCTGGTCCACGAAACAAGCATATTCTAAATGCATTTACTACCCAACGGATAGAAGATGATGCTTCTAAGGGAGGGAGAGGGGAAAAGAGAAGTAGAGTTGGAGCAAATAAATTACCTGGGGTCTCTGCTCATCTCCTAGTTCATCTTTTGACCTTACAGCTCCAGATTAAACCGTTTGTATCAGCATAA

mRNA sequence

ATGAATATAAAAGATGTATATGAGCATATAAACAGGAGATGGATCTCTGCTGGTCCACGAAACAAGCATATTCTAAATGCATTTACTACCCAACGGATAGAAGATGATGCTTCTAAGGGAGGGAGAGGGGAAAAGAGAAGTAGAGTTGGAGCAAATAAATTACCTGGGGTCTCTGCTCATCTCCTAGTTCATCTTTTGACCTTACAGCTCCAGATTAAACCGTTTGTATCAGCATAA

Coding sequence (CDS)

ATGAATATAAAAGATGTATATGAGCATATAAACAGGAGATGGATCTCTGCTGGTCCACGAAACAAGCATATTCTAAATGCATTTACTACCCAACGGATAGAAGATGATGCTTCTAAGGGAGGGAGAGGGGAAAAGAGAAGTAGAGTTGGAGCAAATAAATTACCTGGGGTCTCTGCTCATCTCCTAGTTCATCTTTTGACCTTACAGCTCCAGATTAAACCGTTTGTATCAGCATAA

Protein sequence

MNIKDVYEHINRRWISAGPRNKHILNAFTTQRIEDDASKGGRGEKRSRVGANKLPGVSAHLLVHLLTLQLQIKPFVSA*
Homology
[Close]
BLAST of Csa3G127000 vs. TrEMBL
Match: A0A0A0L7P9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G127000 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.7e-36
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 1 

Query: 1  MNIKDVYEHINRRWISAGPRNKHILNAFTTQRIEDDASKGGRGEKRSRVGANKLPGVSAH 60
          MNIKDVYEHINRRWISAGPRNKHILNAFTTQRIEDDASKGGRGEKRSRVGANKLPGVSAH
Sbjct: 1  MNIKDVYEHINRRWISAGPRNKHILNAFTTQRIEDDASKGGRGEKRSRVGANKLPGVSAH 60

Query: 61 LLVHLLTLQLQIKPFVSA 79
          LLVHLLTLQLQIKPFVSA
Sbjct: 61 LLVHLLTLQLQIKPFVSA 78

[Close]
BLAST of Csa3G127000 vs. NCBI nr
Match: gi|700201504|gb|KGN56637.1| (hypothetical protein Csa_3G127000 [Cucumis sativus])

HSP 1 Score: 159.5 bits (402), Expect = 2.5e-36
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 1 

Query: 1  MNIKDVYEHINRRWISAGPRNKHILNAFTTQRIEDDASKGGRGEKRSRVGANKLPGVSAH 60
          MNIKDVYEHINRRWISAGPRNKHILNAFTTQRIEDDASKGGRGEKRSRVGANKLPGVSAH
Sbjct: 1  MNIKDVYEHINRRWISAGPRNKHILNAFTTQRIEDDASKGGRGEKRSRVGANKLPGVSAH 60

Query: 61 LLVHLLTLQLQIKPFVSA 79
          LLVHLLTLQLQIKPFVSA
Sbjct: 61 LLVHLLTLQLQIKPFVSA 78

The following BLAST results are available for this feature:
BLAST of Csa3G127000 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7P9_CUCSA1.7e-36100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G127000 PE=4 SV=1[more]
BLAST of Csa3G127000 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201504|gb|KGN56637.1|2.5e-36100.00hypothetical protein Csa_3G127000 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G127000.1Csa3G127000.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G127000CsGy3G010000Cucumber (Gy14) v2cgybcuB109
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G127000Silver-seed gourdcarcuB0257
Csa3G127000Silver-seed gourdcarcuB0644
Csa3G127000Silver-seed gourdcarcuB0975
Csa3G127000Silver-seed gourdcarcuB1091
Csa3G127000Watermelon (97103) v2cuwmbB204
Csa3G127000Watermelon (97103) v2cuwmbB227
Csa3G127000Wax gourdcuwgoB259
Csa3G127000Wax gourdcuwgoB270
Csa3G127000Cucumber (Chinese Long) v2cucuB111
Csa3G127000Cucumber (Gy14) v1cgycuB366
Csa3G127000Cucumber (Gy14) v1cgycuB509
Csa3G127000Cucurbita maxima (Rimu)cmacuB253
Csa3G127000Cucurbita maxima (Rimu)cmacuB357
Csa3G127000Cucurbita maxima (Rimu)cmacuB814
Csa3G127000Cucurbita maxima (Rimu)cmacuB892
Csa3G127000Cucurbita moschata (Rifu)cmocuB239
Csa3G127000Cucurbita moschata (Rifu)cmocuB348
Csa3G127000Cucurbita moschata (Rifu)cmocuB806
Csa3G127000Cucurbita moschata (Rifu)cmocuB878
Csa3G127000Melon (DHL92) v3.5.1cumeB182
Csa3G127000Melon (DHL92) v3.5.1cumeB236
Csa3G127000Watermelon (Charleston Gray)cuwcgB222
Csa3G127000Watermelon (Charleston Gray)cuwcgB242
Csa3G127000Watermelon (97103) v1cuwmB233
Csa3G127000Watermelon (97103) v1cuwmB276
Csa3G127000Cucurbita pepo (Zucchini)cpecuB135
Csa3G127000Cucurbita pepo (Zucchini)cpecuB309
Csa3G127000Cucurbita pepo (Zucchini)cpecuB609
Csa3G127000Cucurbita pepo (Zucchini)cpecuB859
Csa3G127000Bottle gourd (USVL1VR-Ls)culsiB154
Csa3G127000Bottle gourd (USVL1VR-Ls)culsiB209
Csa3G127000Cucumber (Gy14) v2cgybcuB256
Csa3G127000Melon (DHL92) v3.6.1cumedB167
Csa3G127000Melon (DHL92) v3.6.1cumedB223