Csa3G123160 (gene) Cucumber (Chinese Long) v2

NameCsa3G123160
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 7384879 .. 7385154 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACACTACAAGAAATCAGTGGTCTTCCGACCCTATCACGCGTCGGCATATATACACAAAGGCGTTAGGGCAAATCCTCCCGACGTACATGGTGTCGTTGAGAAGGAAGTCGGCGTCAGTGCGTCGGGAGAGGGATTCACAACGCGCAATGAAAATGCGTCAAAATGTCATACTCCCGATGCAGTCAATGCCAACAAATGGAGCACGTCGACAATAGGGGACTTTCGATGTTCTATCCCATGTAAAGGAAGGAGTGAGGGAGCAAACAAATAA

mRNA sequence

ATGAAACACTACAAGAAATCAGTGGTCTTCCGACCCTATCACGCGTCGGCATATATACACAAAGGCGTTAGGGCAAATCCTCCCGACGTACATGGTGTCGTTGAGAAGGAAGTCGGCGTCAGTGCGTCGGGAGAGGGATTCACAACGCGCAATGAAAATGCGTCAAAATGTCATACTCCCGATGCAGTCAATGCCAACAAATGGAGCACGTCGACAATAGGGGACTTTCGATGTTCTATCCCATGTAAAGGAAGGAGTGAGGGAGCAAACAAATAA

Coding sequence (CDS)

ATGAAACACTACAAGAAATCAGTGGTCTTCCGACCCTATCACGCGTCGGCATATATACACAAAGGCGTTAGGGCAAATCCTCCCGACGTACATGGTGTCGTTGAGAAGGAAGTCGGCGTCAGTGCGTCGGGAGAGGGATTCACAACGCGCAATGAAAATGCGTCAAAATGTCATACTCCCGATGCAGTCAATGCCAACAAATGGAGCACGTCGACAATAGGGGACTTTCGATGTTCTATCCCATGTAAAGGAAGGAGTGAGGGAGCAAACAAATAA

Protein sequence

MKHYKKSVVFRPYHASAYIHKGVRANPPDVHGVVEKEVGVSASGEGFTTRNENASKCHTPDAVNANKWSTSTIGDFRCSIPCKGRSEGANK*
BLAST of Csa3G123160 vs. TrEMBL
Match: A0A0A0L4A4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G123160 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 3.3e-47
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1

Query: 1  MKHYKKSVVFRPYHASAYIHKGVRANPPDVHGVVEKEVGVSASGEGFTTRNENASKCHTP 60
          MKHYKKSVVFRPYHASAYIHKGVRANPPDVHGVVEKEVGVSASGEGFTTRNENASKCHTP
Sbjct: 1  MKHYKKSVVFRPYHASAYIHKGVRANPPDVHGVVEKEVGVSASGEGFTTRNENASKCHTP 60

Query: 61 DAVNANKWSTSTIGDFRCSIPCKGRSEGANK 92
          DAVNANKWSTSTIGDFRCSIPCKGRSEGANK
Sbjct: 61 DAVNANKWSTSTIGDFRCSIPCKGRSEGANK 91

BLAST of Csa3G123160 vs. NCBI nr
Match: gi|700201410|gb|KGN56543.1| (hypothetical protein Csa_3G123160 [Cucumis sativus])

HSP 1 Score: 195.3 bits (495), Expect = 4.7e-47
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1

Query: 1  MKHYKKSVVFRPYHASAYIHKGVRANPPDVHGVVEKEVGVSASGEGFTTRNENASKCHTP 60
          MKHYKKSVVFRPYHASAYIHKGVRANPPDVHGVVEKEVGVSASGEGFTTRNENASKCHTP
Sbjct: 1  MKHYKKSVVFRPYHASAYIHKGVRANPPDVHGVVEKEVGVSASGEGFTTRNENASKCHTP 60

Query: 61 DAVNANKWSTSTIGDFRCSIPCKGRSEGANK 92
          DAVNANKWSTSTIGDFRCSIPCKGRSEGANK
Sbjct: 61 DAVNANKWSTSTIGDFRCSIPCKGRSEGANK 91

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L4A4_CUCSA3.3e-47100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G123160 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700201410|gb|KGN56543.1|4.7e-47100.00hypothetical protein Csa_3G123160 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G123160.1Csa3G123160.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G123160CSPI03G09050Wild cucumber (PI 183967)cpicuB120
The following gene(s) are paralogous to this gene:

None