Csa3G121630 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G121630
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 7088311 .. 7088601 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGCACCAAAGAGAATCGATTATCCATTTGAAAGTGACAGCGAAAAGTACCTCTCCGTCGCCCGTAGCTACCTTGGCAGGAAAGCAAATCACATCATAACATTTTGCCCTTCTCCAGCCGTCTCTTTGCTCATAAATTTGTACAAATAGTAAACTGTTAGTCATTCTATGTTTCTAAAATTGGGCAAACCTCTCCTTTCTTGAATGAATTTTCATTATTTCCTCAACAGCACAAATGGAAATAATCCAACAAAAGTGAACAAGCACGAGACTTGCCGAGGCAAGTAA

mRNA sequence

ATGGGGGCACCAAAGAGAATCGATTATCCATTTGAAAGTGACAGCGAAAAGTACCTCTCCGTCGCCCGTAGCTACCTTGGCAGGAAAGCAAATCACATCATAACATTTTGCCCTTCTCCAGCCGTCTCTTTGCTCATAAATTTCACAAATGGAAATAATCCAACAAAAGTGAACAAGCACGAGACTTGCCGAGGCAAGTAA

Coding sequence (CDS)

ATGGGGGCACCAAAGAGAATCGATTATCCATTTGAAAGTGACAGCGAAAAGTACCTCTCCGTCGCCCGTAGCTACCTTGGCAGGAAAGCAAATCACATCATAACATTTTGCCCTTCTCCAGCCGTCTCTTTGCTCATAAATTTCACAAATGGAAATAATCCAACAAAAGTGAACAAGCACGAGACTTGCCGAGGCAAGTAA

Protein sequence

MGAPKRIDYPFESDSEKYLSVARSYLGRKANHIITFCPSPAVSLLINFTNGNNPTKVNKHETCRGK*
Homology
[Close]
BLAST of Csa3G121630 vs. TrEMBL
Match: A0A0A0L7C5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G121630 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 5.4e-31
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 1 

Query: 1  MGAPKRIDYPFESDSEKYLSVARSYLGRKANHIITFCPSPAVSLLINFTNGNNPTKVNKH 60
          MGAPKRIDYPFESDSEKYLSVARSYLGRKANHIITFCPSPAVSLLINFTNGNNPTKVNKH
Sbjct: 1  MGAPKRIDYPFESDSEKYLSVARSYLGRKANHIITFCPSPAVSLLINFTNGNNPTKVNKH 60

Query: 61 ETCRGK 67
          ETCRGK
Sbjct: 61 ETCRGK 66

[Close]
BLAST of Csa3G121630 vs. NCBI nr
Match: gi|700201354|gb|KGN56487.1| (hypothetical protein Csa_3G121630 [Cucumis sativus])

HSP 1 Score: 141.0 bits (354), Expect = 7.7e-31
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 1 

Query: 1  MGAPKRIDYPFESDSEKYLSVARSYLGRKANHIITFCPSPAVSLLINFTNGNNPTKVNKH 60
          MGAPKRIDYPFESDSEKYLSVARSYLGRKANHIITFCPSPAVSLLINFTNGNNPTKVNKH
Sbjct: 1  MGAPKRIDYPFESDSEKYLSVARSYLGRKANHIITFCPSPAVSLLINFTNGNNPTKVNKH 60

Query: 61 ETCRGK 67
          ETCRGK
Sbjct: 61 ETCRGK 66

The following BLAST results are available for this feature:
BLAST of Csa3G121630 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7C5_CUCSA5.4e-31100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G121630 PE=4 SV=1[more]
BLAST of Csa3G121630 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201354|gb|KGN56487.1|7.7e-31100.00hypothetical protein Csa_3G121630 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G121630.1Csa3G121630.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G121630CSPI03G08540Wild cucumber (PI 183967)cpicuB120
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G121630Watermelon (97103) v2cuwmbB204
Csa3G121630Watermelon (97103) v2cuwmbB173
Csa3G121630Watermelon (97103) v2cuwmbB176
Csa3G121630Watermelon (97103) v2cuwmbB224
Csa3G121630Watermelon (97103) v2cuwmbB229
Csa3G121630Wax gourdcuwgoB295
Csa3G121630Cucumber (Chinese Long) v2cucuB093
Csa3G121630Cucumber (Chinese Long) v2cucuB095
Csa3G121630Cucumber (Chinese Long) v2cucuB097
Csa3G121630Cucumber (Gy14) v1cgycuB128
Csa3G121630Cucumber (Gy14) v1cgycuB191
Csa3G121630Cucumber (Gy14) v1cgycuB366
Csa3G121630Cucumber (Gy14) v1cgycuB431
Csa3G121630Cucurbita maxima (Rimu)cmacuB253
Csa3G121630Cucurbita maxima (Rimu)cmacuB288
Csa3G121630Cucurbita maxima (Rimu)cmacuB599
Csa3G121630Cucurbita maxima (Rimu)cmacuB828
Csa3G121630Cucurbita moschata (Rifu)cmocuB239
Csa3G121630Cucurbita moschata (Rifu)cmocuB271
Csa3G121630Cucurbita moschata (Rifu)cmocuB275
Csa3G121630Cucurbita moschata (Rifu)cmocuB593
Csa3G121630Cucurbita moschata (Rifu)cmocuB806
Csa3G121630Cucurbita moschata (Rifu)cmocuB818
Csa3G121630Melon (DHL92) v3.5.1cumeB175
Csa3G121630Melon (DHL92) v3.5.1cumeB176
Csa3G121630Melon (DHL92) v3.5.1cumeB183
Csa3G121630Melon (DHL92) v3.5.1cumeB236
Csa3G121630Melon (DHL92) v3.5.1cumeB254
Csa3G121630Melon (DHL92) v3.5.1cumeB257
Csa3G121630Watermelon (Charleston Gray)cuwcgB206
Csa3G121630Watermelon (Charleston Gray)cuwcgB204
Csa3G121630Watermelon (Charleston Gray)cuwcgB222
Csa3G121630Watermelon (Charleston Gray)cuwcgB238
Csa3G121630Watermelon (Charleston Gray)cuwcgB243
Csa3G121630Watermelon (97103) v1cuwmB233
Csa3G121630Watermelon (97103) v1cuwmB258
Csa3G121630Watermelon (97103) v1cuwmB252
Csa3G121630Watermelon (97103) v1cuwmB260
Csa3G121630Cucurbita pepo (Zucchini)cpecuB038
Csa3G121630Cucurbita pepo (Zucchini)cpecuB168
Csa3G121630Cucurbita pepo (Zucchini)cpecuB609
Csa3G121630Cucurbita pepo (Zucchini)cpecuB720
Csa3G121630Cucurbita pepo (Zucchini)cpecuB852
Csa3G121630Bottle gourd (USVL1VR-Ls)culsiB151
Csa3G121630Bottle gourd (USVL1VR-Ls)culsiB153
Csa3G121630Bottle gourd (USVL1VR-Ls)culsiB158
Csa3G121630Bottle gourd (USVL1VR-Ls)culsiB209
Csa3G121630Cucumber (Gy14) v2cgybcuB109
Csa3G121630Cucumber (Gy14) v2cgybcuB163
Csa3G121630Cucumber (Gy14) v2cgybcuB206
Csa3G121630Cucumber (Gy14) v2cgybcuB210
Csa3G121630Cucumber (Gy14) v2cgybcuB267
Csa3G121630Melon (DHL92) v3.6.1cumedB157
Csa3G121630Melon (DHL92) v3.6.1cumedB158
Csa3G121630Melon (DHL92) v3.6.1cumedB169
Csa3G121630Melon (DHL92) v3.6.1cumedB223
Csa3G121630Melon (DHL92) v3.6.1cumedB245
Csa3G121630Melon (DHL92) v3.6.1cumedB246
Csa3G121630Silver-seed gourdcarcuB0522
Csa3G121630Silver-seed gourdcarcuB0629