Csa3G118110 (gene) Cucumber (Chinese Long) v2

NameCsa3G118110
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 6526937 .. 6527241 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAACCCAAAAGATGAGGAAAGAAAAGGTTTCAAGGTAATGTGCTTCTTATCAACTCCCTCCATAAAGTACCATCAGTATGACTTCTGATAGAATGCAGACTGCGAGTGTACAGGAAGAAAATGCTTCGAAAAACGACCTTTTGAAGCTTCGGATGGAGGTAATAGACCGGGAAGTAACGGTGAAGCTGAGAAGTCGAACCATATTGTTCTGTGTACTACTAGGCATCAGAGACTCGGTATATGATTAATGGGGGCATTTACAAGACCGCCTGGTTCGGACATGCCATGCAGCTCATTTAA

mRNA sequence

ATGGCTAACCCAAAAGATGAGGAAAGAAAAGGTTTCAAGACTGCGAGTGTACAGGAAGAAAATGCTTCGAAAAACGACCTTTTGAAGCTTCGGATGGAGGTAATAGACCGGGAAGTAACGGCATCAGAGACTCGGTATATGATTAATGGGGGCATTTACAAGACCGCCTGGTTCGGACATGCCATGCAGCTCATTTAA

Coding sequence (CDS)

ATGGCTAACCCAAAAGATGAGGAAAGAAAAGGTTTCAAGACTGCGAGTGTACAGGAAGAAAATGCTTCGAAAAACGACCTTTTGAAGCTTCGGATGGAGGTAATAGACCGGGAAGTAACGGCATCAGAGACTCGGTATATGATTAATGGGGGCATTTACAAGACCGCCTGGTTCGGACATGCCATGCAGCTCATTTAA

Protein sequence

MANPKDEERKGFKTASVQEENASKNDLLKLRMEVIDREVTASETRYMINGGIYKTAWFGHAMQLI*
BLAST of Csa3G118110 vs. TrEMBL
Match: A0A0A0L8E1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118110 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.4e-28
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 1

Query: 1  MANPKDEERKGFKTASVQEENASKNDLLKLRMEVIDREVTASETRYMINGGIYKTAWFGH 60
          MANPKDEERKGFKTASVQEENASKNDLLKLRMEVIDREVTASETRYMINGGIYKTAWFGH
Sbjct: 1  MANPKDEERKGFKTASVQEENASKNDLLKLRMEVIDREVTASETRYMINGGIYKTAWFGH 60

Query: 61 AMQLI 66
          AMQLI
Sbjct: 61 AMQLI 65

BLAST of Csa3G118110 vs. NCBI nr
Match: gi|700201243|gb|KGN56376.1| (hypothetical protein Csa_3G118110 [Cucumis sativus])

HSP 1 Score: 132.9 bits (333), Expect = 2.1e-28
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 1

Query: 1  MANPKDEERKGFKTASVQEENASKNDLLKLRMEVIDREVTASETRYMINGGIYKTAWFGH 60
          MANPKDEERKGFKTASVQEENASKNDLLKLRMEVIDREVTASETRYMINGGIYKTAWFGH
Sbjct: 1  MANPKDEERKGFKTASVQEENASKNDLLKLRMEVIDREVTASETRYMINGGIYKTAWFGH 60

Query: 61 AMQLI 66
          AMQLI
Sbjct: 61 AMQLI 65

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L8E1_CUCSA1.4e-28100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118110 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700201243|gb|KGN56376.1|2.1e-28100.00hypothetical protein Csa_3G118110 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU118694cucumber EST collection version 3.0transcribed_cluster
CU154241cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G118110.1Csa3G118110.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU154241CU154241transcribed_cluster
CU118694CU118694transcribed_cluster


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G118110CSPI03G07460Wild cucumber (PI 183967)cpicuB120
The following gene(s) are paralogous to this gene:

None