Csa3G020080 (gene) Cucumber (Chinese Long) v2

NameCsa3G020080
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionHeat-shock protein, putative; contains IPR008978 (HSP20-like chaperone)
LocationChr3 : 2117181 .. 2119000 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCTACTCTCTTCATTCTTAAACCCCAATTTCTTGCATTCACTGAATACCACTCTCACTTCTCTTTACTTTAAGCTCTCCAATAATCTCCACCTATGGCTTCTTCCATCGCTCTCCGAAGGCTTGCTGCTTCCTCTGCTACTAAGCTTTTCAATCCTGTTCGCTCCGCCTCTGTTCTCCCCTCCTCTGTTCTTCGTTCTTTCAACACCAATGCTCAGATGACCAACTACGACGATGACGACCGCTCTGTTGATGTGGACTCACGCTCTGACCGCTCCCTCTCTCGTTCTCGTGATCGTTATCCTGGTTTCGGAGGTAGTTGTTATCTTTGTCCGTGCTTTAGTTTTTATCTCGTGTTTTCTTTGTTGATTCTCATGTTTCTGATTTGTTCTCCAGTTTTCAAATCGCTTTTGTGTTTGATTTTTTTTTTTTTTTTGAGTAATTTCGTTTTGGTTTGTGGAAATGGCTTTTGGATCTTCCGGTGGAAATGAATGTTTGAGTTTATATGTTTCATCGTTAGTTCTTGAGCTATGACGATTCTGTTAGGCTAATCTCGGCATGATTTTTGTAGTTAATTGGAGGTAAGTGAAAACTTTTGTTAGTTGTTGTTGGTGGATGTTGAGCCGATCGGTCTTCTCGACCTTGTAGCTATGGTACTCTAAGTTAAGAGGGTTCGAGTGTGTGAACTTGCGTGTTTGTTGTTTTGATTACTCTGTTTACGGGTCTCTGGCATAAAATCTTTGGAATTCTTCATGATTTTGTGAGGATCTTGTTTCGGAAGTGCTTAATGAAAGATTTCCGTGAGTTACCTAGCTCACTAGTAAATTGGATCACATTCTAAGTCTTGTTCTGATCTGGAAACCACGCCATCGTAGTGATTAATTCGTTATGGTTTAGGGGGAAATCTCGATCGTTGTTTGTTAATTCTGGATGCTTGTTCTGAACACTCCTTGTCTGTCAATTTACAGATGTGTTCGATCCGTTTTCTCCGACTAGGAGCCTAAGCCAGGTGCTGAATCTGATGGATCAATTCATGGAGGACCCGTTTCTGGCAGCATCACGAGGAGTAGGAGCAGGTTCAAGGAGGGGCTGGGACGTGAAAGAAGACGACAACGCTCTATATCTCCGAATGGACATGCCAGGACTGAGCAAAGATGATGTGAGGGTGAGTGTGGAGCAGAACACACTGATCATCAAAGGAGAGGGAGCGAAAGAATCTGAAGACGAAGAAGATCGTAGACGATTCTCGAGCAGACTGGACTTGCCTGCGAATCTGTACGAACTGAATTCAATAAAAGCAGAGTGCTGAAAGCGGCAGTGGCCAAAGTGCAGGAAGAAGAAAGGAAGGATGTGAGGCATGTTACTGTTGAGTGAGTAGTTTGGCCCCTCGAAACTAGAAAATTATGAAGAGCTTCTTCTTTCTCCTCTAGGTTTAACTACTTTGATGCTTTGGGTGGTTGTTGTGTCTGCATGTGAATAAGATATGAGGATTTCAGAGTTGTTTTGATAATGTCCTGAAAGTTGTTTGAAGAGTTGAGAAGGTCTTCTGAAATGAAATGTATGAGTAAACTTTCTTTGAATTGAACCAATGCATTCTTAGTACTCTTTTAAGCCATTGAAAGACTTAACTAAAATGGGTTGAAAGGAGTTTGTCTTGTGTAGTAGTGGCAACCATGAATAGGAGGTTTAAAGCTGCTTTATACGCTATATGTGGGCATTTTAATCTTTTAGGTACATTTAAATTCTATTACATTTGTGAATTATTTGGGTTATAAATTTTTCAGATTACATTAAATTATTGGGTGAACTTGTTTAGGTAGG

mRNA sequence

ATGGCTTCTTCCATCGCTCTCCGAAGGCTTGCTGCTTCCTCTGCTACTAAGCTTTTCAATCCTGTTCGCTCCGCCTCTGTTCTCCCCTCCTCTGTTCTTCGTTCTTTCAACACCAATGCTCAGATGACCAACTACGACGATGACGACCGCTCTGTTGATGTGGACTCACGCTCTGACCGCTCCCTCTCTCGTTCTCGTGATCGTTATCCTGGTTTCGGAGATGTGTTCGATCCGTTTTCTCCGACTAGGAGCCTAAGCCAGGTGCTGAATCTGATGGATCAATTCATGGAGGACCCGTTTCTGGCAGCATCACGAGGAGTAGGAGCAGGTTCAAGGAGGGGCTGGGACGTGAAAGAAGACGACAACGCTCTATATCTCCGAATGGACATGCCAGGACTGAGCAAAGATGATGTGAGGGTGAGTGTGGAGCAGAACACACTGATCATCAAAGGAGAGGGAGCGAAAGAATCTGAAGACGAAGAAGATCGTAGACGATTCTCGAGCAGACTGGACTTGCCTGCGAATCTGTACGAACTGAATTCAATAAAAGCAGAGTGCTGA

Coding sequence (CDS)

ATGGCTTCTTCCATCGCTCTCCGAAGGCTTGCTGCTTCCTCTGCTACTAAGCTTTTCAATCCTGTTCGCTCCGCCTCTGTTCTCCCCTCCTCTGTTCTTCGTTCTTTCAACACCAATGCTCAGATGACCAACTACGACGATGACGACCGCTCTGTTGATGTGGACTCACGCTCTGACCGCTCCCTCTCTCGTTCTCGTGATCGTTATCCTGGTTTCGGAGATGTGTTCGATCCGTTTTCTCCGACTAGGAGCCTAAGCCAGGTGCTGAATCTGATGGATCAATTCATGGAGGACCCGTTTCTGGCAGCATCACGAGGAGTAGGAGCAGGTTCAAGGAGGGGCTGGGACGTGAAAGAAGACGACAACGCTCTATATCTCCGAATGGACATGCCAGGACTGAGCAAAGATGATGTGAGGGTGAGTGTGGAGCAGAACACACTGATCATCAAAGGAGAGGGAGCGAAAGAATCTGAAGACGAAGAAGATCGTAGACGATTCTCGAGCAGACTGGACTTGCCTGCGAATCTGTACGAACTGAATTCAATAAAAGCAGAGTGCTGA

Protein sequence

MASSIALRRLAASSATKLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDRSVDVDSRSDRSLSRSRDRYPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKEDDNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEGAKESEDEEDRRRFSSRLDLPANLYELNSIKAEC*
BLAST of Csa3G020080 vs. Swiss-Prot
Match: HS23C_OXYRB (Small heat shock protein, chloroplastic OS=Oxybasis rubra GN=HSP23 PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.9e-48
Identity = 104/185 (56.22%), Postives = 130/185 (70.27%), Query Frame = 1

Query: 3   SSIALRRLAASSATKLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDRSVDVDSRSDRSL 62
           +S+ALRRLA+       N V      P SV RSFNTNAQM   D D    ++D RS+R+ 
Sbjct: 2   ASMALRRLASR------NLVSGGIFRPLSVSRSFNTNAQMGRVDHDH---ELDDRSNRAP 61

Query: 63  SRSRDRYPG--FGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKED 122
              R  +P   F DVFDPF  TRS+ Q++NLMDQ ME+PF+AASRG G   RRGWDV+ED
Sbjct: 62  ISRRGDFPASFFSDVFDPFRATRSVGQLMNLMDQLMENPFMAASRGSGRAMRRGWDVRED 121

Query: 123 DNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEGAKESEDEEDRRRFSSRLDLPANLYELN 182
           + AL L++DMPGL+K+DV+VSVE NTLIIK E  KE+E+EE RRR+SSR++L  NLY+++
Sbjct: 122 EEALELKVDMPGLAKEDVKVSVEDNTLIIKSEAEKETEEEEQRRRYSSRIELTPNLYKID 177

Query: 183 SIKAE 186
            IKAE
Sbjct: 182 GIKAE 177

BLAST of Csa3G020080 vs. Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.6e-46
Identity = 106/191 (55.50%), Postives = 138/191 (72.25%), Query Frame = 1

Query: 1   MASSIALRRLAASSATKLFNPVRSASVL-PSSVLRSFNTNAQMTNYDDDDRSVDVDSRSD 60
           MAS++AL+RL +SS        RS SVL P+   R FNTNA + +YDDD  + D      
Sbjct: 1   MASALALKRLLSSSIAP-----RSRSVLRPAVSSRLFNTNA-VRSYDDDGENGDGVDLYR 60

Query: 61  RSLSRSRDRYPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGA-GSRRGWDVK 120
           RS+ R R  +  F DVFDPFSPTRS+SQVLNLMDQFME+P L+A+RG+GA G+RRGWD+K
Sbjct: 61  RSVPRRRGDF--FSDVFDPFSPTRSVSQVLNLMDQFMENPLLSATRGMGASGARRGWDIK 120

Query: 121 EDDNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEGAKE----SEDEEDRRRFSSRLDLPA 180
           E D+ALYLR+DMPGLS++DV++++EQ+TL+I+GEG  E     E E   RRF+SR+ LP 
Sbjct: 121 EKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGNRRFTSRIGLPD 180

Query: 181 NLYELNSIKAE 186
            +Y+++ IKAE
Sbjct: 181 KIYKIDEIKAE 183

BLAST of Csa3G020080 vs. Swiss-Prot
Match: HS22M_PEA (Heat shock 22 kDa protein, mitochondrial OS=Pisum sativum GN=HSP22 PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 8.7e-40
Identity = 103/191 (53.93%), Postives = 128/191 (67.02%), Query Frame = 1

Query: 1   MASSIALRRLAASS--ATKLFNPVRSASVLPSSVLRSFNTNAQMTNYDD--DDRSVDVDS 60
           MASS+AL+R  +S   ++    PV S      S  RSFNTNA M  YD   DDR+VDV  
Sbjct: 1   MASSLALKRFLSSGLLSSSFLRPVAS------SASRSFNTNA-MRQYDQHSDDRNVDVYR 60

Query: 61  RSDRSLSRSRDRYPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWD 120
            S     R+R       DVFDPFSP RSLSQVLN++D   ++P L+A+      SRRGWD
Sbjct: 61  HS---FPRTRRDDLLLSDVFDPFSPPRSLSQVLNMVDLLTDNPVLSAA------SRRGWD 120

Query: 121 VKEDDNALYLRMDMPGLSKDDVRVSVEQNTLIIKG-EGAKESED-EEDRRRFSSRLDLPA 180
            +E ++AL+LR+DMPGL K+DV++SVEQNTL IKG EGAKESE+ E+  RRFSSR+DLP 
Sbjct: 121 ARETEDALFLRLDMPGLGKEDVKISVEQNTLTIKGEEGAKESEEKEKSGRRFSSRIDLPE 175

Query: 181 NLYELNSIKAE 186
            LY+++ IKAE
Sbjct: 181 KLYKIDVIKAE 175

BLAST of Csa3G020080 vs. Swiss-Prot
Match: HS235_ARATH (23.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.5 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 4.3e-39
Identity = 94/187 (50.27%), Postives = 132/187 (70.59%), Query Frame = 1

Query: 2   ASSIALRRLAASSATKLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDRSVDVDSRSDRS 61
           +S++ALRRL +SS   +   +R+   + +S  R FNTNA   NY+D    VD +  S+R 
Sbjct: 4   SSALALRRLLSSSTVAVPRALRAVRPVAASS-RLFNTNAAR-NYED---GVDRNHHSNRH 63

Query: 62  LSRSRDRYPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGA-GSRRGWDVKED 121
           +SR    +  F  + DPF+PTRSLSQ+LN MDQ  E P ++A+RG+GA G RRGW+VKE 
Sbjct: 64  VSRHGGDF--FSHILDPFTPTRSLSQMLNFMDQVSEIPLVSATRGMGASGVRRGWNVKEK 123

Query: 122 DNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEG-AKESED-EEDRRRFSSRLDLPANLYE 181
           D+AL+LR+DMPGLS++DV++++EQNTL+I+GEG  +E ED   D RRF+SR++LP  +Y+
Sbjct: 124 DDALHLRIDMPGLSREDVKLALEQNTLVIRGEGETEEGEDVSGDGRRFTSRIELPEKVYK 183

Query: 182 LNSIKAE 186
            + IKAE
Sbjct: 184 TDEIKAE 183

BLAST of Csa3G020080 vs. Swiss-Prot
Match: HS22M_SOYBN (Heat shock 22 kDa protein, mitochondrial OS=Glycine max GN=HSP23.9 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.1e-29
Identity = 86/206 (41.75%), Postives = 115/206 (55.83%), Query Frame = 1

Query: 1   MASSIALRRLAASS--ATKLFNPVRSASVLPSSVLRSFNTNAQMTNYDD--DDRSVDVDS 60
           MASS+  +R  +SS  +  L  P  SAS       RSF+TNA M  YD+  DD S D+D 
Sbjct: 1   MASSLIAKRFLSSSLLSRSLLRPAASASH------RSFDTNA-MRQYDNRADDHSTDIDR 60

Query: 61  RSDRSLSRSRDRYPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAG------ 120
            S+RS   +  R     D+F      R +  +      F +  F   S   G G      
Sbjct: 61  HSERSFPSTARR----DDIF-----LRCVGSI------FSDSEFEPGSEHDGPGHGQSVP 120

Query: 121 -----------SRRGWDVKEDDNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEGAKESED 180
                      S RGWD +E ++AL+LR+DMPGL+K+DV++SVEQNTLIIKGEGAKE ++
Sbjct: 121 LRVARDRSWRWSGRGWDARETEDALHLRVDMPGLAKEDVKISVEQNTLIIKGEGAKEGDE 180

Query: 181 EEDRRRFSSRLDLPANLYELNSIKAE 186
           EE  RR++SR+DLP  LY+++ I+AE
Sbjct: 181 EESARRYTSRIDLPDKLYKIDQIRAE 184

BLAST of Csa3G020080 vs. TrEMBL
Match: A0A0A0L494_CUCSA (Mitochondrial small heat shock protein OS=Cucumis sativus GN=Csa_3G020080 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 3.8e-98
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1

Query: 1   MASSIALRRLAASSATKLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDRSVDVDSRSDR 60
           MASSIALRRLAASSATKLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDRSVDVDSRSDR
Sbjct: 1   MASSIALRRLAASSATKLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDRSVDVDSRSDR 60

Query: 61  SLSRSRDRYPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKED 120
           SLSRSRDRYPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKED
Sbjct: 61  SLSRSRDRYPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKED 120

Query: 121 DNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEGAKESEDEEDRRRFSSRLDLPANLYELN 180
           DNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEGAKESEDEEDRRRFSSRLDLPANLYELN
Sbjct: 121 DNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEGAKESEDEEDRRRFSSRLDLPANLYELN 180

Query: 181 SIKAEC 187
           SIKAEC
Sbjct: 181 SIKAEC 186

BLAST of Csa3G020080 vs. TrEMBL
Match: H6TB40_CITLA (HSP23.5 OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 5.6e-86
Identity = 168/184 (91.30%), Postives = 175/184 (95.11%), Query Frame = 1

Query: 1   MASSIALRRLAASSATKLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDRSVDVDSRSDR 60
           MASSIALRRLAASSA KLF+PVRSASVLPS V RSFNTNAQMTNY DDDRSVDVD  SDR
Sbjct: 1   MASSIALRRLAASSAAKLFSPVRSASVLPS-VGRSFNTNAQMTNYADDDRSVDVDRGSDR 60

Query: 61  SLSRSRDRYPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKED 120
           S+SRSRDR+PGF DVFDPFSPTRSLSQVLNLMDQ MEDPFLAASRGVGAGSRRGWDV+ED
Sbjct: 61  SISRSRDRFPGFADVFDPFSPTRSLSQVLNLMDQLMEDPFLAASRGVGAGSRRGWDVRED 120

Query: 121 DNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEGAKESEDEEDRRRFSSRLDLPANLYELN 180
           DNALYLRMDMPGLSK+DV+VSVEQNTLIIKGE AKESEDEEDRRRFSSRLDLPANLYELN
Sbjct: 121 DNALYLRMDMPGLSKEDVKVSVEQNTLIIKGEAAKESEDEEDRRRFSSRLDLPANLYELN 180

Query: 181 SIKA 185
           SIK+
Sbjct: 181 SIKS 183

BLAST of Csa3G020080 vs. TrEMBL
Match: A0A0A0L1K2_CUCSA (Mitochondrial small heat shock protein OS=Cucumis sativus GN=Csa_3G020090 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 4.5e-83
Identity = 165/186 (88.71%), Postives = 169/186 (90.86%), Query Frame = 1

Query: 1   MASSIALRRLAASSATKLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDRSVDVDSRSDR 60
           MASSIALR L A SA KL NPVRSAS+LPSSV RSFNTNAQMTNYD DDRSV+VD RSDR
Sbjct: 1   MASSIALRALTAFSAPKLINPVRSASILPSSVPRSFNTNAQMTNYDHDDRSVEVDRRSDR 60

Query: 61  SLSRSRDRYPGFG-DVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKE 120
           SLSRSRD Y GFG +VFDPFS TRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKE
Sbjct: 61  SLSRSRDPYSGFGGNVFDPFSQTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKE 120

Query: 121 DDNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEGAKESEDEEDRRRFSSRLDLPANLYEL 180
           DDN LYLRMDMPGL KDDV+VSVEQNTLIIKGE  KESEDEED RRFSSRLDLPANLYEL
Sbjct: 121 DDNCLYLRMDMPGLGKDDVKVSVEQNTLIIKGEAEKESEDEEDLRRFSSRLDLPANLYEL 180

Query: 181 NSIKAE 186
           NSIKAE
Sbjct: 181 NSIKAE 186

BLAST of Csa3G020080 vs. TrEMBL
Match: A0A059CHN9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02073 PE=3 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 5.5e-65
Identity = 140/194 (72.16%), Postives = 163/194 (84.02%), Query Frame = 1

Query: 1   MASSIALRRLAASSAT-----KLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDRSVDVD 60
           MASS+ALRR AA++A+     +L NPVR+ASV P +  RSFNT++QM  YD+DD  VDV+
Sbjct: 1   MASSLALRRAAAAAASSGVLSRLTNPVRAASVAPHAP-RSFNTSSQMRRYDEDDSDVDVE 60

Query: 61  SRSDRSLSRSRDRYPG-FGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGA-GSRR 120
            RSDR++SR R+  PG F DVFDPFSPTRSLSQVLNLMDQFME PFLAASRG+GA GSRR
Sbjct: 61  RRSDRAVSRRRE--PGLFSDVFDPFSPTRSLSQVLNLMDQFMESPFLAASRGMGAAGSRR 120

Query: 121 GWDVKEDDNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEGAKESEDEEDR--RRFSSRLD 180
           GWDVKEDD+ALYLRMDMPGLS++DV+VSVEQNTL IKGEG KESE+EE+   RR+SSRLD
Sbjct: 121 GWDVKEDDSALYLRMDMPGLSREDVKVSVEQNTLTIKGEGEKESEEEEEESGRRYSSRLD 180

Query: 181 LPANLYELNSIKAE 186
           LP NLY+L  IKAE
Sbjct: 181 LPPNLYKLGEIKAE 191

BLAST of Csa3G020080 vs. TrEMBL
Match: A0A059CIL4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02073 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 2.7e-64
Identity = 137/193 (70.98%), Postives = 161/193 (83.42%), Query Frame = 1

Query: 1   MASSIALRRLAASSAT-----KLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDRSVDVD 60
           MASS+ALRR AA++A+     +L NPVR+ASV P +  RSFNT++QM  YD+DD  VDV+
Sbjct: 1   MASSLALRRAAAAAASSGVLSRLTNPVRAASVAPHAP-RSFNTSSQMRRYDEDDSDVDVE 60

Query: 61  SRSDRSLSRSRDRYPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVG-AGSRRG 120
            RSDR++SR R+     G+VFDPFSPTRSLSQVLNLMDQFME PFLAASRG+G AGSRRG
Sbjct: 61  RRSDRAVSRRREPGLFSGNVFDPFSPTRSLSQVLNLMDQFMESPFLAASRGMGAAGSRRG 120

Query: 121 WDVKEDDNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEGAKESEDEEDR--RRFSSRLDL 180
           WDVKEDD+ALYLRMDMPGLS++DV+VSVEQNTL IKGEG KESE+EE+   RR+SSRLDL
Sbjct: 121 WDVKEDDSALYLRMDMPGLSREDVKVSVEQNTLTIKGEGEKESEEEEEESGRRYSSRLDL 180

Query: 181 PANLYELNSIKAE 186
           P NLY+L  IKAE
Sbjct: 181 PPNLYKLGEIKAE 192

BLAST of Csa3G020080 vs. TAIR10
Match: AT4G25200.1 (AT4G25200.1 mitochondrion-localized small heat shock protein 23.6)

HSP 1 Score: 187.2 bits (474), Expect = 9.3e-48
Identity = 106/191 (55.50%), Postives = 138/191 (72.25%), Query Frame = 1

Query: 1   MASSIALRRLAASSATKLFNPVRSASVL-PSSVLRSFNTNAQMTNYDDDDRSVDVDSRSD 60
           MAS++AL+RL +SS        RS SVL P+   R FNTNA + +YDDD  + D      
Sbjct: 1   MASALALKRLLSSSIAP-----RSRSVLRPAVSSRLFNTNA-VRSYDDDGENGDGVDLYR 60

Query: 61  RSLSRSRDRYPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGA-GSRRGWDVK 120
           RS+ R R  +  F DVFDPFSPTRS+SQVLNLMDQFME+P L+A+RG+GA G+RRGWD+K
Sbjct: 61  RSVPRRRGDF--FSDVFDPFSPTRSVSQVLNLMDQFMENPLLSATRGMGASGARRGWDIK 120

Query: 121 EDDNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEGAKE----SEDEEDRRRFSSRLDLPA 180
           E D+ALYLR+DMPGLS++DV++++EQ+TL+I+GEG  E     E E   RRF+SR+ LP 
Sbjct: 121 EKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGNRRFTSRIGLPD 180

Query: 181 NLYELNSIKAE 186
            +Y+++ IKAE
Sbjct: 181 KIYKIDEIKAE 183

BLAST of Csa3G020080 vs. TAIR10
Match: AT5G51440.1 (AT5G51440.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 162.5 bits (410), Expect = 2.4e-40
Identity = 94/187 (50.27%), Postives = 132/187 (70.59%), Query Frame = 1

Query: 2   ASSIALRRLAASSATKLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDRSVDVDSRSDRS 61
           +S++ALRRL +SS   +   +R+   + +S  R FNTNA   NY+D    VD +  S+R 
Sbjct: 4   SSALALRRLLSSSTVAVPRALRAVRPVAASS-RLFNTNAAR-NYED---GVDRNHHSNRH 63

Query: 62  LSRSRDRYPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGA-GSRRGWDVKED 121
           +SR    +  F  + DPF+PTRSLSQ+LN MDQ  E P ++A+RG+GA G RRGW+VKE 
Sbjct: 64  VSRHGGDF--FSHILDPFTPTRSLSQMLNFMDQVSEIPLVSATRGMGASGVRRGWNVKEK 123

Query: 122 DNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEG-AKESED-EEDRRRFSSRLDLPANLYE 181
           D+AL+LR+DMPGLS++DV++++EQNTL+I+GEG  +E ED   D RRF+SR++LP  +Y+
Sbjct: 124 DDALHLRIDMPGLSREDVKLALEQNTLVIRGEGETEEGEDVSGDGRRFTSRIELPEKVYK 183

Query: 182 LNSIKAE 186
            + IKAE
Sbjct: 184 TDEIKAE 183

BLAST of Csa3G020080 vs. TAIR10
Match: AT4G27670.1 (AT4G27670.1 heat shock protein 21)

HSP 1 Score: 99.0 bits (245), Expect = 3.3e-21
Identity = 71/204 (34.80%), Postives = 98/204 (48.04%), Query Frame = 1

Query: 1   MASSIALRRLAASSATKLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDRSVDV------ 60
           MAS+++    A  S       V S S  P SV       +++   D  + S+DV      
Sbjct: 1   MASTLSFAASALCSPLAPSPSVSSKSATPFSVSFPRKIPSRIRAQDQRENSIDVVQQGQQ 60

Query: 61  -----DSRSDRSLSRSRDRYPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGA 120
                 S   R   R       FG + DP SP R++ Q+L+ MD+  ED    + R  G 
Sbjct: 61  KGNQGSSVEKRPQQRLTMDVSPFG-LLDPLSPMRTMRQMLDTMDRMFEDTMPVSGRNRGG 120

Query: 121 GS----RRGWDVKEDDNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEGAKESEDEEDRRR 180
                 R  WD+KE+++ + +R DMPGLSK+DV++SVE N L+IKGE  KE  D+    R
Sbjct: 121 SGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKEDSDDSWSGR 180

Query: 181 ----FSSRLDLPANLYELNSIKAE 186
               + +RL LP N  E + IKAE
Sbjct: 181 SVSSYGTRLQLPDNC-EKDKIKAE 202

BLAST of Csa3G020080 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2)

HSP 1 Score: 50.8 bits (120), Expect = 1.0e-06
Identity = 42/132 (31.82%), Postives = 60/132 (45.45%), Query Frame = 1

Query: 74  DVFDPFSPTRSLSQVLNLMDQFMEDPF------------LAASRGVGAGSRRGWDVKEDD 133
           +VFDPFS             Q + DPF             + +R V A +    D KE  
Sbjct: 14  NVFDPFS-------------QDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 73

Query: 134 NALYLRMDMPGLSKDDVRVSVE-QNTLIIKGEGAKESEDEEDR--------RRFSSRLDL 185
            A   + D+PGL K++V+V VE +N L I GE +KE+E++ D+         +F  R  L
Sbjct: 74  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 131

BLAST of Csa3G020080 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 48.9 bits (115), Expect = 3.9e-06
Identity = 39/120 (32.50%), Postives = 56/120 (46.67%), Query Frame = 1

Query: 74  DVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKEDDNALYLRMDMPGL 133
           DVFDPF    + S + N           A +  V A +    D +E   A   + D+PGL
Sbjct: 22  DVFDPFEGFLTPSGLAN-----------APAMDVAAFTNAKVDWRETPEAHVFKADLPGL 81

Query: 134 SKDDVRVSVEQ-NTLIIKGEGAKESEDEEDR--------RRFSSRLDLPANLYELNSIKA 185
            K++V+V VE  N L I GE + E+E++ D+         +F+ R  LP N  ++  IKA
Sbjct: 82  RKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENA-KMEEIKA 129

BLAST of Csa3G020080 vs. NCBI nr
Match: gi|778675417|ref|XP_004147203.2| (PREDICTED: small heat shock protein, chloroplastic-like isoform X2 [Cucumis sativus])

HSP 1 Score: 365.5 bits (937), Expect = 5.4e-98
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1

Query: 1   MASSIALRRLAASSATKLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDRSVDVDSRSDR 60
           MASSIALRRLAASSATKLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDRSVDVDSRSDR
Sbjct: 1   MASSIALRRLAASSATKLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDRSVDVDSRSDR 60

Query: 61  SLSRSRDRYPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKED 120
           SLSRSRDRYPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKED
Sbjct: 61  SLSRSRDRYPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKED 120

Query: 121 DNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEGAKESEDEEDRRRFSSRLDLPANLYELN 180
           DNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEGAKESEDEEDRRRFSSRLDLPANLYELN
Sbjct: 121 DNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEGAKESEDEEDRRRFSSRLDLPANLYELN 180

Query: 181 SIKAEC 187
           SIKAEC
Sbjct: 181 SIKAEC 186

BLAST of Csa3G020080 vs. NCBI nr
Match: gi|778675414|ref|XP_011650406.1| (PREDICTED: small heat shock protein, chloroplastic-like isoform X1 [Cucumis sativus])

HSP 1 Score: 359.0 bits (920), Expect = 5.0e-96
Identity = 185/187 (98.93%), Postives = 186/187 (99.47%), Query Frame = 1

Query: 1   MASSIALRRLAASSATKLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDRSVDVDSRSDR 60
           MASSIALRRLAASSATKLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDRSVDVDSRSDR
Sbjct: 1   MASSIALRRLAASSATKLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDRSVDVDSRSDR 60

Query: 61  SLSRSRDRYPGFG-DVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKE 120
           SLSRSRDRYPGFG +VFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKE
Sbjct: 61  SLSRSRDRYPGFGGNVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKE 120

Query: 121 DDNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEGAKESEDEEDRRRFSSRLDLPANLYEL 180
           DDNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEGAKESEDEEDRRRFSSRLDLPANLYEL
Sbjct: 121 DDNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEGAKESEDEEDRRRFSSRLDLPANLYEL 180

Query: 181 NSIKAEC 187
           NSIKAEC
Sbjct: 181 NSIKAEC 187

BLAST of Csa3G020080 vs. NCBI nr
Match: gi|659095963|ref|XP_008448853.1| (PREDICTED: small heat shock protein, chloroplastic-like isoform X2 [Cucumis melo])

HSP 1 Score: 351.3 bits (900), Expect = 1.1e-93
Identity = 179/185 (96.76%), Postives = 182/185 (98.38%), Query Frame = 1

Query: 1   MASSIALRRLAASSATKLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDRSVDVDSRSDR 60
           MASSIALRRLAASSATKLFNPVRSASVLPSS+ RSFNTNAQMTNYDDDDRSVDVD RSDR
Sbjct: 1   MASSIALRRLAASSATKLFNPVRSASVLPSSLARSFNTNAQMTNYDDDDRSVDVDRRSDR 60

Query: 61  SLSRSRDRYPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKED 120
           SLSRSRDR+PGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAG+RRGWDVKED
Sbjct: 61  SLSRSRDRFPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGTRRGWDVKED 120

Query: 121 DNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEGAKESEDEEDRRRFSSRLDLPANLYELN 180
           DNALYLRMDMPGLSKDDVRVSVEQNTLIIKGE AKESEDEEDRRRFSSRLDLPANLYELN
Sbjct: 121 DNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEEAKESEDEEDRRRFSSRLDLPANLYELN 180

Query: 181 SIKAE 186
           SIKAE
Sbjct: 181 SIKAE 185

BLAST of Csa3G020080 vs. NCBI nr
Match: gi|659095961|ref|XP_008448852.1| (PREDICTED: small heat shock protein, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 344.7 bits (883), Expect = 9.8e-92
Identity = 178/186 (95.70%), Postives = 182/186 (97.85%), Query Frame = 1

Query: 1   MASSIALRRLAASSATKLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDRSVDVDSRSDR 60
           MASSIALRRLAASSATKLFNPVRSASVLPSS+ RSFNTNAQMTNYDDDDRSVDVD RSDR
Sbjct: 1   MASSIALRRLAASSATKLFNPVRSASVLPSSLARSFNTNAQMTNYDDDDRSVDVDRRSDR 60

Query: 61  SLSRSRDRYPGFG-DVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKE 120
           SLSRSRDR+PGFG +VFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAG+RRGWDVKE
Sbjct: 61  SLSRSRDRFPGFGGNVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGTRRGWDVKE 120

Query: 121 DDNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEGAKESEDEEDRRRFSSRLDLPANLYEL 180
           DDNALYLRMDMPGLSKDDVRVSVEQNTLIIKGE AKESEDEEDRRRFSSRLDLPANLYEL
Sbjct: 121 DDNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEEAKESEDEEDRRRFSSRLDLPANLYEL 180

Query: 181 NSIKAE 186
           NSIKAE
Sbjct: 181 NSIKAE 186

BLAST of Csa3G020080 vs. NCBI nr
Match: gi|659095978|ref|XP_008448861.1| (PREDICTED: small heat shock protein, chloroplastic-like isoform X2 [Cucumis melo])

HSP 1 Score: 339.7 bits (870), Expect = 3.2e-90
Identity = 174/185 (94.05%), Postives = 178/185 (96.22%), Query Frame = 1

Query: 1   MASSIALRRLAASSATKLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDRSVDVDSRSDR 60
           MASSIALRRLAASSA+KL  PVRSASVLPSSV RSFNT+A MTNYDD DRS+DVD RSDR
Sbjct: 1   MASSIALRRLAASSASKLIRPVRSASVLPSSVGRSFNTDAHMTNYDDHDRSLDVDRRSDR 60

Query: 61  SLSRSRDRYPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKED 120
           SLSRSRDRYPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKED
Sbjct: 61  SLSRSRDRYPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKED 120

Query: 121 DNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEGAKESEDEEDRRRFSSRLDLPANLYELN 180
           DNALYLRMDMPGLSKDDV+VSVEQNTLIIKGE AKESEDEEDRRRFSSRLDLPANLYELN
Sbjct: 121 DNALYLRMDMPGLSKDDVKVSVEQNTLIIKGEAAKESEDEEDRRRFSSRLDLPANLYELN 180

Query: 181 SIKAE 186
           SIKAE
Sbjct: 181 SIKAE 185

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
HS23C_OXYRB3.9e-4856.22Small heat shock protein, chloroplastic OS=Oxybasis rubra GN=HSP23 PE=2 SV=1[more]
HS23M_ARATH1.6e-4655.5023.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE... [more]
HS22M_PEA8.7e-4053.93Heat shock 22 kDa protein, mitochondrial OS=Pisum sativum GN=HSP22 PE=2 SV=1[more]
HS235_ARATH4.3e-3950.2723.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.5 PE... [more]
HS22M_SOYBN4.1e-2941.75Heat shock 22 kDa protein, mitochondrial OS=Glycine max GN=HSP23.9 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0L494_CUCSA3.8e-98100.00Mitochondrial small heat shock protein OS=Cucumis sativus GN=Csa_3G020080 PE=3 S... [more]
H6TB40_CITLA5.6e-8691.30HSP23.5 OS=Citrullus lanatus PE=2 SV=1[more]
A0A0A0L1K2_CUCSA4.5e-8388.71Mitochondrial small heat shock protein OS=Cucumis sativus GN=Csa_3G020090 PE=3 S... [more]
A0A059CHN9_EUCGR5.5e-6572.16Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02073 PE=3 SV=1[more]
A0A059CIL4_EUCGR2.7e-6470.98Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02073 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT4G25200.19.3e-4855.50 mitochondrion-localized small heat shock protein 23.6[more]
AT5G51440.12.4e-4050.27 HSP20-like chaperones superfamily protein[more]
AT4G27670.13.3e-2134.80 heat shock protein 21[more]
AT5G59720.11.0e-0631.82 heat shock protein 18.2[more]
AT1G53540.13.9e-0632.50 HSP20-like chaperones superfamily protein[more]
Match NameE-valueIdentityDescription
gi|778675417|ref|XP_004147203.2|5.4e-98100.00PREDICTED: small heat shock protein, chloroplastic-like isoform X2 [Cucumis sati... [more]
gi|778675414|ref|XP_011650406.1|5.0e-9698.93PREDICTED: small heat shock protein, chloroplastic-like isoform X1 [Cucumis sati... [more]
gi|659095963|ref|XP_008448853.1|1.1e-9396.76PREDICTED: small heat shock protein, chloroplastic-like isoform X2 [Cucumis melo... [more]
gi|659095961|ref|XP_008448852.1|9.8e-9295.70PREDICTED: small heat shock protein, chloroplastic-like isoform X1 [Cucumis melo... [more]
gi|659095978|ref|XP_008448861.1|3.2e-9094.05PREDICTED: small heat shock protein, chloroplastic-like isoform X2 [Cucumis melo... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002068A-crystallin/Hsp20_dom
IPR008978HSP20-like_chaperone
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU084781cucumber EST collection version 3.0transcribed_cluster
CU111852cucumber EST collection version 3.0transcribed_cluster
CU114829cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G020080.1Csa3G020080.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU114829CU114829transcribed_cluster
CU084781CU084781transcribed_cluster
CU111852CU111852transcribed_cluster


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 116..186
score: 2.1
IPR002068Alpha crystallin/Hsp20 domainPROFILEPS01031HSP20coord: 116..186
score: 13
IPR008978HSP20-like chaperoneGENE3DG3DSA:2.60.40.790coord: 76..185
score: 7.3
IPR008978HSP20-like chaperoneunknownSSF49764HSP20-like chaperonescoord: 82..185
score: 1.26
NoneNo IPR availablePANTHERPTHR11527:SF136SUBFAMILY NOT NAMEDcoord: 1..185
score: 1.4

The following gene(s) are paralogous to this gene:

None