Csa3G020080 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCTACTCTCTTCATTCTTAAACCCCAATTTCTTGCATTCACTGAATACCACTCTCACTTCTCTTTACTTTAAGCTCTCCAATAATCTCCACCTATGGCTTCTTCCATCGCTCTCCGAAGGCTTGCTGCTTCCTCTGCTACTAAGCTTTTCAATCCTGTTCGCTCCGCCTCTGTTCTCCCCTCCTCTGTTCTTCGTTCTTTCAACACCAATGCTCAGATGACCAACTACGACGATGACGACCGCTCTGTTGATGTGGACTCACGCTCTGACCGCTCCCTCTCTCGTTCTCGTGATCGTTATCCTGGTTTCGGAGGTAGTTGTTATCTTTGTCCGTGCTTTAGTTTTTATCTCGTGTTTTCTTTGTTGATTCTCATGTTTCTGATTTGTTCTCCAGTTTTCAAATCGCTTTTGTGTTTGATTTTTTTTTTTTTTTTGAGTAATTTCGTTTTGGTTTGTGGAAATGGCTTTTGGATCTTCCGGTGGAAATGAATGTTTGAGTTTATATGTTTCATCGTTAGTTCTTGAGCTATGACGATTCTGTTAGGCTAATCTCGGCATGATTTTTGTAGTTAATTGGAGGTAAGTGAAAACTTTTGTTAGTTGTTGTTGGTGGATGTTGAGCCGATCGGTCTTCTCGACCTTGTAGCTATGGTACTCTAAGTTAAGAGGGTTCGAGTGTGTGAACTTGCGTGTTTGTTGTTTTGATTACTCTGTTTACGGGTCTCTGGCATAAAATCTTTGGAATTCTTCATGATTTTGTGAGGATCTTGTTTCGGAAGTGCTTAATGAAAGATTTCCGTGAGTTACCTAGCTCACTAGTAAATTGGATCACATTCTAAGTCTTGTTCTGATCTGGAAACCACGCCATCGTAGTGATTAATTCGTTATGGTTTAGGGGGAAATCTCGATCGTTGTTTGTTAATTCTGGATGCTTGTTCTGAACACTCCTTGTCTGTCAATTTACAGATGTGTTCGATCCGTTTTCTCCGACTAGGAGCCTAAGCCAGGTGCTGAATCTGATGGATCAATTCATGGAGGACCCGTTTCTGGCAGCATCACGAGGAGTAGGAGCAGGTTCAAGGAGGGGCTGGGACGTGAAAGAAGACGACAACGCTCTATATCTCCGAATGGACATGCCAGGACTGAGCAAAGATGATGTGAGGGTGAGTGTGGAGCAGAACACACTGATCATCAAAGGAGAGGGAGCGAAAGAATCTGAAGACGAAGAAGATCGTAGACGATTCTCGAGCAGACTGGACTTGCCTGCGAATCTGTACGAACTGAATTCAATAAAAGCAGAGTGCTGAAAGCGGCAGTGGCCAAAGTGCAGGAAGAAGAAAGGAAGGATGTGAGGCATGTTACTGTTGAGTGAGTAGTTTGGCCCCTCGAAACTAGAAAATTATGAAGAGCTTCTTCTTTCTCCTCTAGGTTTAACTACTTTGATGCTTTGGGTGGTTGTTGTGTCTGCATGTGAATAAGATATGAGGATTTCAGAGTTGTTTTGATAATGTCCTGAAAGTTGTTTGAAGAGTTGAGAAGGTCTTCTGAAATGAAATGTATGAGTAAACTTTCTTTGAATTGAACCAATGCATTCTTAGTACTCTTTTAAGCCATTGAAAGACTTAACTAAAATGGGTTGAAAGGAGTTTGTCTTGTGTAGTAGTGGCAACCATGAATAGGAGGTTTAAAGCTGCTTTATACGCTATATGTGGGCATTTTAATCTTTTAGGTACATTTAAATTCTATTACATTTGTGAATTATTTGGGTTATAAATTTTTCAGATTACATTAAATTATTGGGTGAACTTGTTTAGGTAGG ATGGCTTCTTCCATCGCTCTCCGAAGGCTTGCTGCTTCCTCTGCTACTAAGCTTTTCAATCCTGTTCGCTCCGCCTCTGTTCTCCCCTCCTCTGTTCTTCGTTCTTTCAACACCAATGCTCAGATGACCAACTACGACGATGACGACCGCTCTGTTGATGTGGACTCACGCTCTGACCGCTCCCTCTCTCGTTCTCGTGATCGTTATCCTGGTTTCGGAGATGTGTTCGATCCGTTTTCTCCGACTAGGAGCCTAAGCCAGGTGCTGAATCTGATGGATCAATTCATGGAGGACCCGTTTCTGGCAGCATCACGAGGAGTAGGAGCAGGTTCAAGGAGGGGCTGGGACGTGAAAGAAGACGACAACGCTCTATATCTCCGAATGGACATGCCAGGACTGAGCAAAGATGATGTGAGGGTGAGTGTGGAGCAGAACACACTGATCATCAAAGGAGAGGGAGCGAAAGAATCTGAAGACGAAGAAGATCGTAGACGATTCTCGAGCAGACTGGACTTGCCTGCGAATCTGTACGAACTGAATTCAATAAAAGCAGAGTGCTGA ATGGCTTCTTCCATCGCTCTCCGAAGGCTTGCTGCTTCCTCTGCTACTAAGCTTTTCAATCCTGTTCGCTCCGCCTCTGTTCTCCCCTCCTCTGTTCTTCGTTCTTTCAACACCAATGCTCAGATGACCAACTACGACGATGACGACCGCTCTGTTGATGTGGACTCACGCTCTGACCGCTCCCTCTCTCGTTCTCGTGATCGTTATCCTGGTTTCGGAGATGTGTTCGATCCGTTTTCTCCGACTAGGAGCCTAAGCCAGGTGCTGAATCTGATGGATCAATTCATGGAGGACCCGTTTCTGGCAGCATCACGAGGAGTAGGAGCAGGTTCAAGGAGGGGCTGGGACGTGAAAGAAGACGACAACGCTCTATATCTCCGAATGGACATGCCAGGACTGAGCAAAGATGATGTGAGGGTGAGTGTGGAGCAGAACACACTGATCATCAAAGGAGAGGGAGCGAAAGAATCTGAAGACGAAGAAGATCGTAGACGATTCTCGAGCAGACTGGACTTGCCTGCGAATCTGTACGAACTGAATTCAATAAAAGCAGAGTGCTGA MASSIALRRLAASSATKLFNPVRSASVLPSSVLRSFNTNAQMTNYDDDDRSVDVDSRSDRSLSRSRDRYPGFGDVFDPFSPTRSLSQVLNLMDQFMEDPFLAASRGVGAGSRRGWDVKEDDNALYLRMDMPGLSKDDVRVSVEQNTLIIKGEGAKESEDEEDRRRFSSRLDLPANLYELNSIKAEC*
BLAST of Csa3G020080 vs. Swiss-Prot
Match: HS23C_OXYRB (Small heat shock protein, chloroplastic OS=Oxybasis rubra GN=HSP23 PE=2 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 3.9e-48 Identity = 104/185 (56.22%), Postives = 130/185 (70.27%), Query Frame = 1
BLAST of Csa3G020080 vs. Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 1.6e-46 Identity = 106/191 (55.50%), Postives = 138/191 (72.25%), Query Frame = 1
BLAST of Csa3G020080 vs. Swiss-Prot
Match: HS22M_PEA (Heat shock 22 kDa protein, mitochondrial OS=Pisum sativum GN=HSP22 PE=2 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 8.7e-40 Identity = 103/191 (53.93%), Postives = 128/191 (67.02%), Query Frame = 1
BLAST of Csa3G020080 vs. Swiss-Prot
Match: HS235_ARATH (23.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.5 PE=2 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 4.3e-39 Identity = 94/187 (50.27%), Postives = 132/187 (70.59%), Query Frame = 1
BLAST of Csa3G020080 vs. Swiss-Prot
Match: HS22M_SOYBN (Heat shock 22 kDa protein, mitochondrial OS=Glycine max GN=HSP23.9 PE=2 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 4.1e-29 Identity = 86/206 (41.75%), Postives = 115/206 (55.83%), Query Frame = 1
BLAST of Csa3G020080 vs. TrEMBL
Match: A0A0A0L494_CUCSA (Mitochondrial small heat shock protein OS=Cucumis sativus GN=Csa_3G020080 PE=3 SV=1) HSP 1 Score: 365.5 bits (937), Expect = 3.8e-98 Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1
BLAST of Csa3G020080 vs. TrEMBL
Match: H6TB40_CITLA (HSP23.5 OS=Citrullus lanatus PE=2 SV=1) HSP 1 Score: 325.1 bits (832), Expect = 5.6e-86 Identity = 168/184 (91.30%), Postives = 175/184 (95.11%), Query Frame = 1
BLAST of Csa3G020080 vs. TrEMBL
Match: A0A0A0L1K2_CUCSA (Mitochondrial small heat shock protein OS=Cucumis sativus GN=Csa_3G020090 PE=3 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 4.5e-83 Identity = 165/186 (88.71%), Postives = 169/186 (90.86%), Query Frame = 1
BLAST of Csa3G020080 vs. TrEMBL
Match: A0A059CHN9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02073 PE=3 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 5.5e-65 Identity = 140/194 (72.16%), Postives = 163/194 (84.02%), Query Frame = 1
BLAST of Csa3G020080 vs. TrEMBL
Match: A0A059CIL4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02073 PE=3 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 2.7e-64 Identity = 137/193 (70.98%), Postives = 161/193 (83.42%), Query Frame = 1
BLAST of Csa3G020080 vs. TAIR10
Match: AT4G25200.1 (AT4G25200.1 mitochondrion-localized small heat shock protein 23.6) HSP 1 Score: 187.2 bits (474), Expect = 9.3e-48 Identity = 106/191 (55.50%), Postives = 138/191 (72.25%), Query Frame = 1
BLAST of Csa3G020080 vs. TAIR10
Match: AT5G51440.1 (AT5G51440.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 162.5 bits (410), Expect = 2.4e-40 Identity = 94/187 (50.27%), Postives = 132/187 (70.59%), Query Frame = 1
BLAST of Csa3G020080 vs. TAIR10
Match: AT4G27670.1 (AT4G27670.1 heat shock protein 21) HSP 1 Score: 99.0 bits (245), Expect = 3.3e-21 Identity = 71/204 (34.80%), Postives = 98/204 (48.04%), Query Frame = 1
BLAST of Csa3G020080 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2) HSP 1 Score: 50.8 bits (120), Expect = 1.0e-06 Identity = 42/132 (31.82%), Postives = 60/132 (45.45%), Query Frame = 1
BLAST of Csa3G020080 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 48.9 bits (115), Expect = 3.9e-06 Identity = 39/120 (32.50%), Postives = 56/120 (46.67%), Query Frame = 1
BLAST of Csa3G020080 vs. NCBI nr
Match: gi|778675417|ref|XP_004147203.2| (PREDICTED: small heat shock protein, chloroplastic-like isoform X2 [Cucumis sativus]) HSP 1 Score: 365.5 bits (937), Expect = 5.4e-98 Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1
BLAST of Csa3G020080 vs. NCBI nr
Match: gi|778675414|ref|XP_011650406.1| (PREDICTED: small heat shock protein, chloroplastic-like isoform X1 [Cucumis sativus]) HSP 1 Score: 359.0 bits (920), Expect = 5.0e-96 Identity = 185/187 (98.93%), Postives = 186/187 (99.47%), Query Frame = 1
BLAST of Csa3G020080 vs. NCBI nr
Match: gi|659095963|ref|XP_008448853.1| (PREDICTED: small heat shock protein, chloroplastic-like isoform X2 [Cucumis melo]) HSP 1 Score: 351.3 bits (900), Expect = 1.1e-93 Identity = 179/185 (96.76%), Postives = 182/185 (98.38%), Query Frame = 1
BLAST of Csa3G020080 vs. NCBI nr
Match: gi|659095961|ref|XP_008448852.1| (PREDICTED: small heat shock protein, chloroplastic-like isoform X1 [Cucumis melo]) HSP 1 Score: 344.7 bits (883), Expect = 9.8e-92 Identity = 178/186 (95.70%), Postives = 182/186 (97.85%), Query Frame = 1
BLAST of Csa3G020080 vs. NCBI nr
Match: gi|659095978|ref|XP_008448861.1| (PREDICTED: small heat shock protein, chloroplastic-like isoform X2 [Cucumis melo]) HSP 1 Score: 339.7 bits (870), Expect = 3.2e-90 Identity = 174/185 (94.05%), Postives = 178/185 (96.22%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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