Csa3G002770 (gene) Cucumber (Chinese Long) v2

NameCsa3G002770
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 487721 .. 487909 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCATACTCCCCACAATTAAAACAACCACCGCCGCCGCCGCCGCCACCACTTCCACCTCCAGCTCCACCCCTATTGCAATCCCTAGCCAAATGCCCAAAACCACCACAATTGTAGCAAGCCCCACCGCCACCGCCGCCTCCACCTCCGCCTCCACCACTGTTCCCTCGTGGACAATCCCTCGCTAA

mRNA sequence

ATGCCCATACTCCCCACAATTAAAACAACCACCGCCGCCGCCGCCGCCACCACTTCCACCTCCAGCTCCACCCCTATTGCAATCCCTAGCCAAATGCCCAAAACCACCACAATTGTAGCAAGCCCCACCGCCACCGCCGCCTCCACCTCCGCCTCCACCACTGTTCCCTCGTGGACAATCCCTCGCTAA

Coding sequence (CDS)

ATGCCCATACTCCCCACAATTAAAACAACCACCGCCGCCGCCGCCGCCACCACTTCCACCTCCAGCTCCACCCCTATTGCAATCCCTAGCCAAATGCCCAAAACCACCACAATTGTAGCAAGCCCCACCGCCACCGCCGCCTCCACCTCCGCCTCCACCACTGTTCCCTCGTGGACAATCCCTCGCTAA

Protein sequence

MPILPTIKTTTAAAAATTSTSSSTPIAIPSQMPKTTTIVASPTATAASTSASTTVPSWTIPR*
BLAST of Csa3G002770 vs. TrEMBL
Match: A0A0A0L1M4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002770 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 5.4e-25
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1

Query: 1  MPILPTIKTTTAAAAATTSTSSSTPIAIPSQMPKTTTIVASPTATAASTSASTTVPSWTI 60
          MPILPTIKTTTAAAAATTSTSSSTPIAIPSQMPKTTTIVASPTATAASTSASTTVPSWTI
Sbjct: 1  MPILPTIKTTTAAAAATTSTSSSTPIAIPSQMPKTTTIVASPTATAASTSASTTVPSWTI 60

Query: 61 PR 63
          PR
Sbjct: 61 PR 62

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L1M4_CUCSA5.4e-25100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002770 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU105417cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G002770.1Csa3G002770.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU105417CU105417transcribed_cluster


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None