Csa2G416060 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G416060
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionLOB domain-containing protein, putative; contains IPR004883 (Lateral organ boundaries, LOB)
LocationChr2 : 21368388 .. 21369253 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAAGCACAATAACGGAGTTTTGCAGGGAACACCCGCTTGTGCAGCCTGCAAACACCAGAGGAAGAAATGCCACGAGACGTGTCCGTTGGCACCTTACTTTCCTGCAGAACGGAACAGGGAATTCCAAGCCGTTCACAAGGTGTTTGGAGTGAGCAATGTGACCAAAATGGTGAAAAACGTGAGAGAAGAAGACAAGAGAAAGGCTGTGGATTCTTTGATTTGGGAAGCTGTTTGTAGGCAAAACGACCCCGTTTTAGGGCCCTATGGTGAATACAAAAGGGTTTTGGAAGAGGTAAAAGTGTGTAAATTATTGACTCAAAACCAAAGCATTATGAATGGAGGGCAAGTGGGATTGGGTTATAAACCAATAATACCATGTTTGGGAGCGTGGAACAATAATAACAATAATAATAGTAATGATAATAATAATAATAATGGAAATGGAAATGGTAATTTGATTAATAATGGAAATGGGATTATGGGGATAATCAATGGAGGAGTTAATAGCAGCCATTTACTTAATTACTTTCATGATAATTATGTAAGTGCCATAGTTGATTCAAGTCCTTACAGCAATTCTTCCGCTTATAATTTACAAAGTCATGAGAAATTGATGAGATTGCAACAAGATAAAGAGATTAGTTCAAACATGGTTGTGCCACTTCAGCAGCAGCAGCATCCAACCTTTCACCATTGTTTTTAACCAACTTTCTCTAATTTGTTACATTTTTGCATTTTTAATGATGATCAACTTATCTTTTTAATCTTTACTTGAGTTGATGTAAACCTTCTTTCGTTTTTTTTTCTTCTTCTAAATTTTAGATGTTATATCTTGTGTCTGGTGGAAATCTAGAGCTCTAG

mRNA sequence

ATGCAAAAGCACAATAACGGAGTTTTGCAGGGAACACCCGCTTGTGCAGCCTGCAAACACCAGAGGAAGAAATGCCACGAGACGTGTCCGTTGGCACCTTACTTTCCTGCAGAACGGAACAGGGAATTCCAAGCCGTTCACAAGGTGTTTGGAGTGAGCAATGTGACCAAAATGGTGAAAAACGTGAGAGAAGAAGACAAGAGAAAGGCTGTGGATTCTTTGATTTGGGAAGCTGTTTGTAGGCAAAACGACCCCGTTTTAGGGCCCTATGGTGAATACAAAAGGGTTTTGGAAGAGATGTTATATCTTGTGTCTGGTGGAAATCTAGAGCTCTAG

Coding sequence (CDS)

ATGCAAAAGCACAATAACGGAGTTTTGCAGGGAACACCCGCTTGTGCAGCCTGCAAACACCAGAGGAAGAAATGCCACGAGACGTGTCCGTTGGCACCTTACTTTCCTGCAGAACGGAACAGGGAATTCCAAGCCGTTCACAAGGTGTTTGGAGTGAGCAATGTGACCAAAATGGTGAAAAACGTGAGAGAAGAAGACAAGAGAAAGGCTGTGGATTCTTTGATTTGGGAAGCTGTTTGTAGGCAAAACGACCCCGTTTTAGGGCCCTATGGTGAATACAAAAGGGTTTTGGAAGAGATGTTATATCTTGTGTCTGGTGGAAATCTAGAGCTCTAG

Protein sequence

MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVKNVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEMLYLVSGGNLEL*
Homology
[Close]
BLAST of Csa2G416060 vs. Swiss-Prot
Match: LBD2_ARATH (LOB domain-containing protein 2 OS=Arabidopsis thaliana GN=LBD2 PE=2 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 1.5e-31
Identity = 61/87 (70.11%), Postives = 70/87 (80.46%), Query Frame = 1 

Query: 14  ACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVKNVREEDKRKAVDS 73
           ACA+CKHQRKKC+  C L+PYFPA + +EFQAVHKVFGVSNV KMV+ VREED+ K  DS
Sbjct: 24  ACASCKHQRKKCNNECILSPYFPARKTKEFQAVHKVFGVSNVQKMVRTVREEDRTKLSDS 83

Query: 74  LIWEAVCRQNDPVLGPYGEYKRVLEEM 101
           L WEA+ RQ DPVLG YGEY+R+ EE+
Sbjct: 84  LTWEALWRQKDPVLGSYGEYRRICEEL 110

[Close]
BLAST of Csa2G416060 vs. Swiss-Prot
Match: LBD22_ARATH (LOB domain-containing protein 22 OS=Arabidopsis thaliana GN=LBD22 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.9e-19
Identity = 45/99 (45.45%), Postives = 67/99 (67.68%), Query Frame = 1 

Query: 4   HNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVKNVR 63
           +NN   Q   ACAACK+QR+KC   C LAPYFP +R+R+F   HK+FGVSN+TK++K++ 
Sbjct: 29  NNNSTNQ---ACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNAHKLFGVSNITKIIKSLT 88

Query: 64  EEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEMLY 103
             +K  A+ ++++++  R NDPV G YG  K++  ++ Y
Sbjct: 89  PPEKDAAMHTIMFQSDARANDPVDGCYGIIKKLQYQIEY 124

[Close]
BLAST of Csa2G416060 vs. Swiss-Prot
Match: LBD7_ARATH (LOB domain-containing protein 7 OS=Arabidopsis thaliana GN=LBD7 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.3e-17
Identity = 42/79 (53.16%), Postives = 52/79 (65.82%), Query Frame = 1 

Query: 12 TPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVKNVREEDKRKAV 71
          T ACAACKHQRKKC + C LA YFP +   +F   HK+FGVSN+TKM+K + E  +  A+
Sbjct: 11 TTACAACKHQRKKCKKNCILARYFPQDGTNKFLNAHKLFGVSNITKMLKRIEESQRDIAM 70

Query: 72 DSLIWEAVCRQNDPVLGPY 91
          ++LI+ A  R  DPV G Y
Sbjct: 71 ENLIYHANARALDPVGGVY 89

[Close]
BLAST of Csa2G416060 vs. Swiss-Prot
Match: LBD27_ARATH (LOB domain-containing protein 27 OS=Arabidopsis thaliana GN=LBD27 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.8e-16
Identity = 39/91 (42.86%), Postives = 61/91 (67.03%), Query Frame = 1 

Query: 14  ACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVKNVREEDKRKAVDS 73
           ACAACK+QR++C   CPLAPYFPAE+ + FQ VH++FGV ++ K+++ + E  K +A+ S
Sbjct: 36  ACAACKYQRRRCAADCPLAPYFPAEQPKLFQNVHRLFGVRSIVKILEKLDETQKPEAMKS 95

Query: 74  LIWEAVCRQNDPVLGPYGEYKRVLEEMLYLV 105
           +I+++  R   PV G  G    V +++ Y++
Sbjct: 96  IIFQSYVRDRSPVHGCLG----VTQQLQYMI 122

[Close]
BLAST of Csa2G416060 vs. Swiss-Prot
Match: LBD28_ARATH (LOB domain-containing protein 28 OS=Arabidopsis thaliana GN=LBD28 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 6.9e-16
Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 1 

Query: 15  CAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVKNVREEDKRKAVDSL 74
           CAACKH R+KC E C  APYFP+ +   ++AVHKVFG S+V  ++ ++    +  A+D+L
Sbjct: 13  CAACKHLRRKCTEDCVFAPYFPSTKLDNYEAVHKVFGASHVATLINSLHPCQREFAMDTL 72

Query: 75  IWEAVCRQNDPVLGPYGEYKRVLEEM 101
            WEA  + NDPV G  G    +L ++
Sbjct: 73  AWEAQVQANDPVNGCLGIIYNLLSQI 98

[Close]
BLAST of Csa2G416060 vs. TrEMBL
Match: A0A0A0LMR3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G416060 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 2.7e-59
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1 

Query: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60
           MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEMLYLVSGGNLEL 112
           NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEMLYLVSGGNLEL
Sbjct: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEMLYLVSGGNLEL 111

[Close]
BLAST of Csa2G416060 vs. TrEMBL
Match: M5X2Z5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013477mg PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.2e-37
Identity = 73/100 (73.00%), Postives = 83/100 (83.00%), Query Frame = 1 

Query: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60
           MQ+ NNG     PACAACKHQRKKCH+ C LAPYFPA+R REF AVHKVFGVSNVTKMVK
Sbjct: 1   MQRKNNGTPGTQPACAACKHQRKKCHDGCVLAPYFPADRTREFLAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEM 101
           N  E ++RK VDSL+WEA+CRQ DPVLGPYGEY+ V +E+
Sbjct: 61  NANEANRRKVVDSLVWEALCRQKDPVLGPYGEYRMVFDEL 100

[Close]
BLAST of Csa2G416060 vs. TrEMBL
Match: K4DCG8_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 6.0e-35
Identity = 71/100 (71.00%), Postives = 85/100 (85.00%), Query Frame = 1 

Query: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60
           MQK N     G  ACA+CKHQRKKC + C LAPYFPAE+ REF+AVHKVFGVSN+TK+VK
Sbjct: 1   MQKPN-----GLAACASCKHQRKKCTDKCVLAPYFPAEKIREFKAVHKVFGVSNITKIVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEM 101
           N++E+D+R+A++SLIWEA CRQ DPVLGPYGEYKRV EE+
Sbjct: 61  NLKEDDRRRAIESLIWEAFCRQRDPVLGPYGEYKRVYEEL 95

[Close]
BLAST of Csa2G416060 vs. TrEMBL
Match: A0A0B2S8T4_GLYSO (LOB domain-containing protein 2 OS=Glycine soja GN=glysoja_042247 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 3.0e-34
Identity = 69/99 (69.70%), Postives = 81/99 (81.82%), Query Frame = 1 

Query: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60
           MQ++N+G+    PACAACKHQRKKC E C L PYFP+ R+REF AVHKVFGVSN+TK+VK
Sbjct: 1   MQRNNSGM---HPACAACKHQRKKCSENCILEPYFPSNRSREFYAVHKVFGVSNITKLVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEE 100
           N +EED+RK VDSLIWEA CRQ DP+ GPYGEY +V  E
Sbjct: 61  NAKEEDRRKVVDSLIWEACCRQRDPIQGPYGEYTKVYNE 96

[Close]
BLAST of Csa2G416060 vs. TrEMBL
Match: K7LUC7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 3.0e-34
Identity = 69/99 (69.70%), Postives = 81/99 (81.82%), Query Frame = 1 

Query: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60
           MQ++N+G+    PACAACKHQRKKC E C L PYFP+ R+REF AVHKVFGVSN+TK+VK
Sbjct: 2   MQRNNSGM---HPACAACKHQRKKCSENCILEPYFPSNRSREFYAVHKVFGVSNITKLVK 61

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEE 100
           N +EED+RK VDSLIWEA CRQ DP+ GPYGEY +V  E
Sbjct: 62  NAKEEDRRKVVDSLIWEACCRQRDPIQGPYGEYTKVYNE 97

[Close]
BLAST of Csa2G416060 vs. TAIR10
Match: AT1G06280.1 (AT1G06280.1 LOB domain-containing protein 2)

HSP 1 Score: 136.7 bits (343), Expect = 8.6e-33
Identity = 61/87 (70.11%), Postives = 70/87 (80.46%), Query Frame = 1 

Query: 14  ACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVKNVREEDKRKAVDS 73
           ACA+CKHQRKKC+  C L+PYFPA + +EFQAVHKVFGVSNV KMV+ VREED+ K  DS
Sbjct: 24  ACASCKHQRKKCNNECILSPYFPARKTKEFQAVHKVFGVSNVQKMVRTVREEDRTKLSDS 83

Query: 74  LIWEAVCRQNDPVLGPYGEYKRVLEEM 101
           L WEA+ RQ DPVLG YGEY+R+ EE+
Sbjct: 84  LTWEALWRQKDPVLGSYGEYRRICEEL 110

[Close]
BLAST of Csa2G416060 vs. TAIR10
Match: AT3G13850.1 (AT3G13850.1 LOB domain-containing protein 22)

HSP 1 Score: 95.5 bits (236), Expect = 2.2e-20
Identity = 45/99 (45.45%), Postives = 67/99 (67.68%), Query Frame = 1 

Query: 4   HNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVKNVR 63
           +NN   Q   ACAACK+QR+KC   C LAPYFP +R+R+F   HK+FGVSN+TK++K++ 
Sbjct: 29  NNNSTNQ---ACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNAHKLFGVSNITKIIKSLT 88

Query: 64  EEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEMLY 103
             +K  A+ ++++++  R NDPV G YG  K++  ++ Y
Sbjct: 89  PPEKDAAMHTIMFQSDARANDPVDGCYGIIKKLQYQIEY 124

[Close]
BLAST of Csa2G416060 vs. TAIR10
Match: AT1G72980.1 (AT1G72980.1 LOB domain-containing protein 7)

HSP 1 Score: 90.5 bits (223), Expect = 7.1e-19
Identity = 42/79 (53.16%), Postives = 52/79 (65.82%), Query Frame = 1 

Query: 12 TPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVKNVREEDKRKAV 71
          T ACAACKHQRKKC + C LA YFP +   +F   HK+FGVSN+TKM+K + E  +  A+
Sbjct: 11 TTACAACKHQRKKCKKNCILARYFPQDGTNKFLNAHKLFGVSNITKMLKRIEESQRDIAM 70

Query: 72 DSLIWEAVCRQNDPVLGPY 91
          ++LI+ A  R  DPV G Y
Sbjct: 71 ENLIYHANARALDPVGGVY 89

[Close]
BLAST of Csa2G416060 vs. TAIR10
Match: AT3G47870.1 (AT3G47870.1 LOB domain-containing protein 27)

HSP 1 Score: 86.7 bits (213), Expect = 1.0e-17
Identity = 39/91 (42.86%), Postives = 61/91 (67.03%), Query Frame = 1 

Query: 14  ACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVKNVREEDKRKAVDS 73
           ACAACK+QR++C   CPLAPYFPAE+ + FQ VH++FGV ++ K+++ + E  K +A+ S
Sbjct: 36  ACAACKYQRRRCAADCPLAPYFPAEQPKLFQNVHRLFGVRSIVKILEKLDETQKPEAMKS 95

Query: 74  LIWEAVCRQNDPVLGPYGEYKRVLEEMLYLV 105
           +I+++  R   PV G  G    V +++ Y++
Sbjct: 96  IIFQSYVRDRSPVHGCLG----VTQQLQYMI 122

[Close]
BLAST of Csa2G416060 vs. TAIR10
Match: AT3G50510.1 (AT3G50510.1 LOB domain-containing protein 28)

HSP 1 Score: 84.7 bits (208), Expect = 3.9e-17
Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 1 

Query: 15  CAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVKNVREEDKRKAVDSL 74
           CAACKH R+KC E C  APYFP+ +   ++AVHKVFG S+V  ++ ++    +  A+D+L
Sbjct: 13  CAACKHLRRKCTEDCVFAPYFPSTKLDNYEAVHKVFGASHVATLINSLHPCQREFAMDTL 72

Query: 75  IWEAVCRQNDPVLGPYGEYKRVLEEM 101
            WEA  + NDPV G  G    +L ++
Sbjct: 73  AWEAQVQANDPVNGCLGIIYNLLSQI 98

[Close]
BLAST of Csa2G416060 vs. NCBI nr
Match: gi|700208096|gb|KGN63215.1| (hypothetical protein Csa_2G416060 [Cucumis sativus])

HSP 1 Score: 235.7 bits (600), Expect = 3.9e-59
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1 

Query: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60
           MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEMLYLVSGGNLEL 112
           NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEMLYLVSGGNLEL
Sbjct: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEMLYLVSGGNLEL 111

[Close]
BLAST of Csa2G416060 vs. NCBI nr
Match: gi|778674434|ref|XP_011650212.1| (PREDICTED: LOB domain-containing protein 2-like [Cucumis sativus])

HSP 1 Score: 213.4 bits (542), Expect = 2.0e-52
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 1 

Query: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60
           MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEM 101
           NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEE+
Sbjct: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEV 100

[Close]
BLAST of Csa2G416060 vs. NCBI nr
Match: gi|659111843|ref|XP_008455936.1| (PREDICTED: LOB domain-containing protein 2-like [Cucumis melo])

HSP 1 Score: 207.2 bits (526), Expect = 1.5e-50
Identity = 95/99 (95.96%), Postives = 98/99 (98.99%), Query Frame = 1 

Query: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60
           MQ+HNNG+LQ TPACAACKHQRKKCHETCPLAPYFPA+RNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEE 100
           NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEE
Sbjct: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEE 99

[Close]
BLAST of Csa2G416060 vs. NCBI nr
Match: gi|595877531|ref|XP_007212241.1| (hypothetical protein PRUPE_ppa013477mg [Prunus persica])

HSP 1 Score: 162.9 bits (411), Expect = 3.2e-37
Identity = 73/100 (73.00%), Postives = 83/100 (83.00%), Query Frame = 1 

Query: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60
           MQ+ NNG     PACAACKHQRKKCH+ C LAPYFPA+R REF AVHKVFGVSNVTKMVK
Sbjct: 1   MQRKNNGTPGTQPACAACKHQRKKCHDGCVLAPYFPADRTREFLAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEM 101
           N  E ++RK VDSL+WEA+CRQ DPVLGPYGEY+ V +E+
Sbjct: 61  NANEANRRKVVDSLVWEALCRQKDPVLGPYGEYRMVFDEL 100

[Close]
BLAST of Csa2G416060 vs. NCBI nr
Match: gi|764605061|ref|XP_004305435.2| (PREDICTED: LOB domain-containing protein 2-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 157.5 bits (397), Expect = 1.3e-35
Identity = 72/94 (76.60%), Postives = 80/94 (85.11%), Query Frame = 1 

Query: 8   VLQGT-PACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVKNVREED 67
           V  GT PACAACKHQRKKC E C LAPYFP ERNREFQAVHKVFGVSNVTKMVKN  E +
Sbjct: 7   VTPGTIPACAACKHQRKKCSEGCTLAPYFPVERNREFQAVHKVFGVSNVTKMVKNANEAN 66

Query: 68  KRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEM 101
           +RK VDSL+WEA+CRQ DPVLGPYGEY+ + +E+
Sbjct: 67  RRKVVDSLVWEALCRQKDPVLGPYGEYRMIFDEL 100

The following BLAST results are available for this feature:
BLAST of Csa2G416060 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LBD2_ARATH1.5e-3170.11LOB domain-containing protein 2 OS=Arabidopsis thaliana GN=LBD2 PE=2 SV=2[more]
LBD22_ARATH3.9e-1945.45LOB domain-containing protein 22 OS=Arabidopsis thaliana GN=LBD22 PE=2 SV=1[more]
LBD7_ARATH1.3e-1753.16LOB domain-containing protein 7 OS=Arabidopsis thaliana GN=LBD7 PE=2 SV=1[more]
LBD27_ARATH1.8e-1642.86LOB domain-containing protein 27 OS=Arabidopsis thaliana GN=LBD27 PE=2 SV=1[more]
LBD28_ARATH6.9e-1644.19LOB domain-containing protein 28 OS=Arabidopsis thaliana GN=LBD28 PE=2 SV=1[more]
BLAST of Csa2G416060 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LMR3_CUCSA2.7e-59100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G416060 PE=4 SV=1[more]
M5X2Z5_PRUPE2.2e-3773.00Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013477mg PE=4 SV=1[more]
K4DCG8_SOLLC6.0e-3571.00Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
A0A0B2S8T4_GLYSO3.0e-3469.70LOB domain-containing protein 2 OS=Glycine soja GN=glysoja_042247 PE=4 SV=1[more]
K7LUC7_SOYBN3.0e-3469.70Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
BLAST of Csa2G416060 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G06280.18.6e-3370.11 LOB domain-containing protein 2[more]
AT3G13850.12.2e-2045.45 LOB domain-containing protein 22[more]
AT1G72980.17.1e-1953.16 LOB domain-containing protein 7[more]
AT3G47870.11.0e-1742.86 LOB domain-containing protein 27[more]
AT3G50510.13.9e-1744.19 LOB domain-containing protein 28[more]
BLAST of Csa2G416060 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700208096|gb|KGN63215.1|3.9e-59100.00hypothetical protein Csa_2G416060 [Cucumis sativus][more]
gi|778674434|ref|XP_011650212.1|2.0e-5299.00PREDICTED: LOB domain-containing protein 2-like [Cucumis sativus][more]
gi|659111843|ref|XP_008455936.1|1.5e-5095.96PREDICTED: LOB domain-containing protein 2-like [Cucumis melo][more]
gi|595877531|ref|XP_007212241.1|3.2e-3773.00hypothetical protein PRUPE_ppa013477mg [Prunus persica][more]
gi|764605061|ref|XP_004305435.2|1.3e-3576.60PREDICTED: LOB domain-containing protein 2-like [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005951 carbamoyl-phosphate synthase complex
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G416060.1Csa2G416060.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 14..98
score: 5.5
IPR004883Lateral organ boundaries, LOBPROFILEPS50891LOBcoord: 13..111
score: 22
NoneNo IPR availablePANTHERPTHR31301FAMILY NOT NAMEDcoord: 13..100
score: 2.7
NoneNo IPR availablePANTHERPTHR31301:SF19LOB DOMAIN-CONTAINING PROTEIN 2coord: 13..100
score: 2.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G416060MELO3C019314Melon (DHL92) v3.5.1cumeB097
Csa2G416060ClCG02G010110Watermelon (Charleston Gray)cuwcgB130
Csa2G416060Lsi10G000930Bottle gourd (USVL1VR-Ls)culsiB094
Csa2G416060MELO3C019314.2Melon (DHL92) v3.6.1cumedB088
Csa2G416060Cla97C02G036240Watermelon (97103) v2cuwmbB127
Csa2G416060Bhi10G001075Wax gourdcuwgoB174
Csa2G416060CSPI02G26080Wild cucumber (PI 183967)cpicuB065
Csa2G416060Cucsa.309430Cucumber (Gy14) v1cgycuB443
Csa2G416060CmaCh02G001890Cucurbita maxima (Rimu)cmacuB589
Csa2G416060CmoCh02G001950Cucurbita moschata (Rifu)cmocuB578
Csa2G416060Cp4.1LG05g14080Cucurbita pepo (Zucchini)cpecuB705
Csa2G416060CsGy2G025680Cucumber (Gy14) v2cgybcuB057
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G416060Melon (DHL92) v3.5.1cumeB103
Csa2G416060Watermelon (Charleston Gray)cuwcgB128
Csa2G416060Watermelon (97103) v1cuwmB154
Csa2G416060Cucurbita pepo (Zucchini)cpecuB233
Csa2G416060Cucurbita pepo (Zucchini)cpecuB269
Csa2G416060Cucurbita pepo (Zucchini)cpecuB663
Csa2G416060Bottle gourd (USVL1VR-Ls)culsiB099
Csa2G416060Cucumber (Gy14) v2cgybcuB296
Csa2G416060Melon (DHL92) v3.6.1cumedB097
Csa2G416060Silver-seed gourdcarcuB0361
Csa2G416060Watermelon (97103) v2cuwmbB116
Csa2G416060Watermelon (97103) v2cuwmbB124
Csa2G416060Wax gourdcuwgoB151
Csa2G416060Cucumber (Chinese Long) v2cucuB078
Csa2G416060Cucumber (Gy14) v1cgycuB213
Csa2G416060Cucurbita maxima (Rimu)cmacuB114
Csa2G416060Cucurbita maxima (Rimu)cmacuB505
Csa2G416060Cucurbita maxima (Rimu)cmacuB539
Csa2G416060Cucurbita moschata (Rifu)cmocuB101
Csa2G416060Cucurbita moschata (Rifu)cmocuB493
Csa2G416060Cucurbita moschata (Rifu)cmocuB534