Csa2G409500 (gene) Cucumber (Chinese Long) v2

NameCsa2G409500
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 21287399 .. 21288078 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCCATTTACGAACTCTAACAAGAAAAAAAAAATCCCCTCATTGACAAACAGGAAAACAGATGCCACAACCAAAATTGATAGCAACAAAAAACATCCCTGTTTGATAGAAGGAAAAAATAATAAAACGAAAATTGAGGATTGAGGATTGAGGATTGAGGATTCATATAAAGAAAAAAGGAAAATTAAAGCCACAAGGCTCCAGCCTGTTTCAAAATAGGAACCAAATCCCCAGAAATATGAGTAGCCATGACTCTATCCAAACCCCCAAACAAGGTGCCTCCGATAAAGACAGCCGGCAATTGCAAATTAACATTAGAAGATTTAGCAAAAGCCTCCAATTCCTTGAGCACTCCAGATTCTTGTTCTTCATCCACTTCATACACCGCCGGATTGGCTCCCAGTCCTAATAGAAGACGCTTTACCACATGGCTCATACAGCATCCTCTTCTAGCAAACACTATCGCCGCACTCTCGGAAACTGACGCAACGACGTCCCTTCTTCTTCCTCCACCCTCGGAGGGCATGGACGCTGCTGATCCACCGACGACGGTGGCGGCCCATGGTGGTCTCATTGATAATGTGGTTTGTTTTGTGTCAATTGATTGCCATGATCGGTAAGGGATTGCTTGGTGCATGATTGTAGATTTGTAAAGAGTACAGGTGTCGTTTGGAGTAAATT

mRNA sequence

ATGACTCTATCCAAACCCCCAAACAAGGTGCCTCCGATAAAGACAGCCGGCAATTGCAAATTAACATTAGAAGATTTAGCAAAAGCCTCCAATTCCTTGAGCACTCCAGATTCTTGTTCTTCATCCACTTCATACACCGCCGGATTGGCTCCCAGTCCTAATAGAAGACGCTTTACCACATGGCTCATACAGCATCCTCTTCTAGCAAACACTATCGCCGCACTCTCGGAAACTGACGCAACGACGTCCCTTCTTCTTCCTCCACCCTCGGAGGGCATGGACGCTGCTGATCCACCGACGACGGTGGCGGCCCATGGTGGTCTCATTGATAATGTGGTTTGTTTTGTGTCAATTGATTGCCATGATCGGTAA

Coding sequence (CDS)

ATGACTCTATCCAAACCCCCAAACAAGGTGCCTCCGATAAAGACAGCCGGCAATTGCAAATTAACATTAGAAGATTTAGCAAAAGCCTCCAATTCCTTGAGCACTCCAGATTCTTGTTCTTCATCCACTTCATACACCGCCGGATTGGCTCCCAGTCCTAATAGAAGACGCTTTACCACATGGCTCATACAGCATCCTCTTCTAGCAAACACTATCGCCGCACTCTCGGAAACTGACGCAACGACGTCCCTTCTTCTTCCTCCACCCTCGGAGGGCATGGACGCTGCTGATCCACCGACGACGGTGGCGGCCCATGGTGGTCTCATTGATAATGTGGTTTGTTTTGTGTCAATTGATTGCCATGATCGGTAA

Protein sequence

MTLSKPPNKVPPIKTAGNCKLTLEDLAKASNSLSTPDSCSSSTSYTAGLAPSPNRRRFTTWLIQHPLLANTIAALSETDATTSLLLPPPSEGMDAADPPTTVAAHGGLIDNVVCFVSIDCHDR*
BLAST of Csa2G409500 vs. TrEMBL
Match: A0A0A0LQX8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G409500 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 2.4e-64
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1

Query: 1   MTLSKPPNKVPPIKTAGNCKLTLEDLAKASNSLSTPDSCSSSTSYTAGLAPSPNRRRFTT 60
           MTLSKPPNKVPPIKTAGNCKLTLEDLAKASNSLSTPDSCSSSTSYTAGLAPSPNRRRFTT
Sbjct: 1   MTLSKPPNKVPPIKTAGNCKLTLEDLAKASNSLSTPDSCSSSTSYTAGLAPSPNRRRFTT 60

Query: 61  WLIQHPLLANTIAALSETDATTSLLLPPPSEGMDAADPPTTVAAHGGLIDNVVCFVSIDC 120
           WLIQHPLLANTIAALSETDATTSLLLPPPSEGMDAADPPTTVAAHGGLIDNVVCFVSIDC
Sbjct: 61  WLIQHPLLANTIAALSETDATTSLLLPPPSEGMDAADPPTTVAAHGGLIDNVVCFVSIDC 120

Query: 121 HDR 124
           HDR
Sbjct: 121 HDR 123

BLAST of Csa2G409500 vs. NCBI nr
Match: gi|700208088|gb|KGN63207.1| (hypothetical protein Csa_2G409500 [Cucumis sativus])

HSP 1 Score: 252.7 bits (644), Expect = 3.4e-64
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1

Query: 1   MTLSKPPNKVPPIKTAGNCKLTLEDLAKASNSLSTPDSCSSSTSYTAGLAPSPNRRRFTT 60
           MTLSKPPNKVPPIKTAGNCKLTLEDLAKASNSLSTPDSCSSSTSYTAGLAPSPNRRRFTT
Sbjct: 1   MTLSKPPNKVPPIKTAGNCKLTLEDLAKASNSLSTPDSCSSSTSYTAGLAPSPNRRRFTT 60

Query: 61  WLIQHPLLANTIAALSETDATTSLLLPPPSEGMDAADPPTTVAAHGGLIDNVVCFVSIDC 120
           WLIQHPLLANTIAALSETDATTSLLLPPPSEGMDAADPPTTVAAHGGLIDNVVCFVSIDC
Sbjct: 61  WLIQHPLLANTIAALSETDATTSLLLPPPSEGMDAADPPTTVAAHGGLIDNVVCFVSIDC 120

Query: 121 HDR 124
           HDR
Sbjct: 121 HDR 123

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LQX8_CUCSA2.4e-64100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G409500 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700208088|gb|KGN63207.1|3.4e-64100.00hypothetical protein Csa_2G409500 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0045454 cell redox homeostasis
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU100978cucumber EST collection version 3.0transcribed_cluster
CU170854cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G409500.1Csa2G409500.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU100978CU100978transcribed_cluster
CU170854CU170854transcribed_cluster


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G409500Lsi10G000850Bottle gourd (USVL1VR-Ls)culsiB094
Csa2G409500CmaCh20G005790Cucurbita maxima (Rimu)cmacuB539
Csa2G409500Cp4.1LG16g04030Cucurbita pepo (Zucchini)cpecuB269
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G409500Cucumber (Chinese Long) v2cucuB068
Csa2G409500Cucumber (Chinese Long) v2cucuB078
Csa2G409500Cucumber (Gy14) v1cgycuB021
Csa2G409500Cucurbita maxima (Rimu)cmacuB114
Csa2G409500Cucurbita maxima (Rimu)cmacuB505
Csa2G409500Cucurbita maxima (Rimu)cmacuB589
Csa2G409500Cucurbita moschata (Rifu)cmocuB101
Csa2G409500Cucurbita moschata (Rifu)cmocuB493
Csa2G409500Cucurbita moschata (Rifu)cmocuB534
Csa2G409500Cucurbita moschata (Rifu)cmocuB578
Csa2G409500Cucurbita moschata (Rifu)cmocuB642
Csa2G409500Melon (DHL92) v3.5.1cumeB097
Csa2G409500Melon (DHL92) v3.5.1cumeB103
Csa2G409500Watermelon (Charleston Gray)cuwcgB111
Csa2G409500Watermelon (Charleston Gray)cuwcgB128
Csa2G409500Watermelon (Charleston Gray)cuwcgB130
Csa2G409500Watermelon (97103) v1cuwmB135
Csa2G409500Watermelon (97103) v1cuwmB154
Csa2G409500Cucurbita pepo (Zucchini)cpecuB233
Csa2G409500Cucurbita pepo (Zucchini)cpecuB663
Csa2G409500Cucurbita pepo (Zucchini)cpecuB705
Csa2G409500Bottle gourd (USVL1VR-Ls)culsiB099
Csa2G409500Cucumber (Gy14) v2cgybcuB057
Csa2G409500Cucumber (Gy14) v2cgybcuB296
Csa2G409500Melon (DHL92) v3.6.1cumedB088
Csa2G409500Melon (DHL92) v3.6.1cumedB097
Csa2G409500Melon (DHL92) v3.6.1cumedB150
Csa2G409500Silver-seed gourdcarcuB0361
Csa2G409500Silver-seed gourdcarcuB0820
Csa2G409500Watermelon (97103) v2cuwmbB094
Csa2G409500Watermelon (97103) v2cuwmbB116
Csa2G409500Watermelon (97103) v2cuwmbB124
Csa2G409500Watermelon (97103) v2cuwmbB127
Csa2G409500Wax gourdcuwgoB174
Csa2G409500Wax gourdcuwgoB151