Csa2G383930 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G383930
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionGlutamate receptor 2.8
LocationChr2 : 20037582 .. 20039118 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCGTGCCGACGAAGAGCAGCAAGAACACTAGCATGTGGGCTTTCTTAAAGCCTCTTACTTGGAAGTTATGGGTCGTTATAGGCTGCGCCTTTGTGTTCATGCCATTTATTGTTTGGATACTCGAACATCGAGTCAATGAGAAATTCAATGGAAGTGTTGTTGATCAGATTTTTAACAGTCTTTGCTACTCTTTTTCCACCATGGTTTTCGTCCATCGTATGTAACCCAACTCTAACCTTTTTTAATATAATTAAAAATAATTTGTTGAAATATCTTGAATATCTATTATCTAATACTAAAATGGACCCAACACAGCCATCACTGGTGGGGTTTGGAATGCAACACCTTTGGAACCTAAGTTGTATTTGTGTTTATATGAATTAGAAGAATGCATACATCATAATTTCTAATATGATATTTTCTCCCTAATAATAAACTGTTTGAACCACGTAAATCTCTACCGTTTATCTTTGATAGTTTATTTTATATCAGCATTGGCATTACTAAATATTTTGTAACCTACTATTTTGGATAATCTTATAATATTTCAGGATCAGAGCCTACATACAATCATTGCACTAAAATTGTGGTAATAATATGGCTCTTTGTGGTTCTTATCATTACACAAAGTTACACTGCAAGTTTGGCTTCATTTTTTACTGTCCAAGAGCTCAAACCAACTGTAACTGATATCAATCAACTTCTTAAAAATGGAGAGAACGTTGGGTATCAAGGAGGTTCTTTCGTGTACGAGATTCTCAAGTCATTGAAGTTCCATGATTCCCAACTCAAAACTTATCAATCTCCGGAACAAATGCATGAACTTTTTCTCAAAGGAAGCACCAATGGCGGAATTTCTGTTGCTGTAGATGAAAACCCTTATATTAAGTTGTTTCTGGCCAAATATTGCTTCCAATATACCACCAGCGAACCCACTTACAAAGTCGATGGATTTGGTTTTGTAAGTTACTTAATTTGTGTTTAAAAACATTTTTTTAATTATATTCAGAAAAATAATCTTAGTTATCTACCAAAACTTGCAAAAAACTCAGTAAATTTGGAAAATCTGGATTGGGAGGTTTGTTTGGATTAGGCCAAAACAGTTAAAATAAAGTTTTTATATTTCTAACACCATTTCTTATATGCTGTTTGTTTTGGACAGGGTTTTCCGAGAGGCTCGCCGTTAGTATCTGACATTTCGAGAGCGATTTTGAAGGTAACAGAGGGTGATAGAATAAGAGAGATCGAAAACCAATGGTTCAAGAAGGTGAGAGAATGTTCGAGTTCAGAAGCTGCTGAATTGTCTTCCTCCCGCCTCAGTATCGACTTTTTGAGGGACTTTTTCTTGTAACCGGCATTGCTTCCATATCTTTTGTGGTTGGTTACCTTGTCGTCTTTCTCTACAAAGAACTGCCACAATCTTGGAAACCTAATCGGTCCTTCCAGACAATAATAGTTGAGTTGTTTTCCACGTTCCTGGCTACAGATGACATAGCTATAGCTATTGGAAGAAGTTGTGAACACCAAGATTAA

mRNA sequence

ATGGTCGTGCCGACGAAGAGCAGCAAGAACACTAGCATGTGGGCTTTCTTAAAGCCTCTTACTTGGAAGTTATGGGTCGTTATAGGCTGCGCCTTTGTGTTCATGCCATTTATTGTTTGGATACTCGAACATCGAGTCAATGAGAAATTCAATGGAAGTGTTGTTGATCAGATTTTTAACAGTCTTTGCTACTCTTTTTCCACCATGGTTTTCGTCCATCTAAATTTGGAAAATCTGGATTGGGAGGGTTTTCCGAGAGGCTCGCCGTTAGTATCTGACATTTCGAGAGCGATTTTGAAGGTAACAGAGGGTGATAGAATAAGAGAGATCGAAAACCAATGGTTCAAGAAGTATCGACTTTTTGAGGGACTTTTTCTTGTAACCGGCATTGCTTCCATATCTTTTGTGGTTGGTTACCTTGTCGTCTTTCTCTACAAAGAACTGCCACAATCTTGGAAACCTAATCGGTCCTTCCAGACAATAATAGTTGAGTTGTTTTCCACGTTCCTGGCTACAGATGACATAGCTATAGCTATTGGAAGAAGTTGTGAACACCAAGATTAA

Coding sequence (CDS)

ATGGTCGTGCCGACGAAGAGCAGCAAGAACACTAGCATGTGGGCTTTCTTAAAGCCTCTTACTTGGAAGTTATGGGTCGTTATAGGCTGCGCCTTTGTGTTCATGCCATTTATTGTTTGGATACTCGAACATCGAGTCAATGAGAAATTCAATGGAAGTGTTGTTGATCAGATTTTTAACAGTCTTTGCTACTCTTTTTCCACCATGGTTTTCGTCCATCTAAATTTGGAAAATCTGGATTGGGAGGGTTTTCCGAGAGGCTCGCCGTTAGTATCTGACATTTCGAGAGCGATTTTGAAGGTAACAGAGGGTGATAGAATAAGAGAGATCGAAAACCAATGGTTCAAGAAGTATCGACTTTTTGAGGGACTTTTTCTTGTAACCGGCATTGCTTCCATATCTTTTGTGGTTGGTTACCTTGTCGTCTTTCTCTACAAAGAACTGCCACAATCTTGGAAACCTAATCGGTCCTTCCAGACAATAATAGTTGAGTTGTTTTCCACGTTCCTGGCTACAGATGACATAGCTATAGCTATTGGAAGAAGTTGTGAACACCAAGATTAA

Protein sequence

MVVPTKSSKNTSMWAFLKPLTWKLWVVIGCAFVFMPFIVWILEHRVNEKFNGSVVDQIFNSLCYSFSTMVFVHLNLENLDWEGFPRGSPLVSDISRAILKVTEGDRIREIENQWFKKYRLFEGLFLVTGIASISFVVGYLVVFLYKELPQSWKPNRSFQTIIVELFSTFLATDDIAIAIGRSCEHQD*
Homology
[Close]
BLAST of Csa2G383930 vs. Swiss-Prot
Match: GLR29_ARATH (Glutamate receptor 2.9 OS=Arabidopsis thaliana GN=GLR2.9 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.2e-16
Identity = 38/73 (52.05%), Postives = 47/73 (64.38%), Query Frame = 1 

Query: 1   MVVPTKSSKNTSMWAFLKPLTWKLWVVIGCAFVFMPFIVWILEHRVNEKFNGSVVDQIFN 60
           M+VP + ++N   W FL+P + +LWV  GC FVF+ F+VW+ EHRVN  F G    QI  
Sbjct: 546 MMVPVRDNENKDTWVFLEPWSLELWVTTGCFFVFIGFVVWLFEHRVNTDFRGPPQYQIGT 605

Query: 61  SLCYSFSTMVFVH 74
           SL +SFSTMVF H
Sbjct: 606 SLWFSFSTMVFAH 618


HSP 2 Score: 47.0 bits (110), Expect = 2.7e-04
Identity = 26/80 (32.50%), Postives = 40/80 (50.00%), Query Frame = 1 

Query: 84  FPRGSPLVSDISRAILKVTEGDRIREIENQWFKK-----------------YRLFEGLFL 143
           FP+ SPL  + SRAIL +T+ +  ++IE++WF K                    F GLFL
Sbjct: 755 FPKNSPLTGEFSRAILNLTQNNVTQQIEDRWFPKKNDCPDPMTALSSNRLNLSSFLGLFL 814

Query: 144 VTGIASISFVVGYLVVFLYK 147
           + G A    ++ ++ +FLY+
Sbjct: 815 IAGTAISFSLLVFVALFLYE 834

[Close]
BLAST of Csa2G383930 vs. Swiss-Prot
Match: GLR27_ARATH (Glutamate receptor 2.7 OS=Arabidopsis thaliana GN=GLR2.7 PE=2 SV=3)

HSP 1 Score: 80.9 bits (198), Expect = 1.7e-14
Identity = 40/73 (54.79%), Postives = 45/73 (61.64%), Query Frame = 1 

Query: 1   MVVPTKSSKNTSMWAFLKPLTWKLWVVIGCAFVFMPFIVWILEHRVNEKFNGSVVDQIFN 60
           M+VP K +KNT  W FL+P +  LWV   C FVF+ FIVWILEHRVN  F G    QI  
Sbjct: 564 MMVPLKDNKNT--WVFLRPWSLDLWVTTACFFVFIGFIVWILEHRVNTDFRGPPHHQIGT 623

Query: 61  SLCYSFSTMVFVH 74
           S  ++FSTM F H
Sbjct: 624 SFWFAFSTMNFAH 634


HSP 2 Score: 61.2 bits (147), Expect = 1.4e-08
Identity = 33/80 (41.25%), Postives = 44/80 (55.00%), Query Frame = 1 

Query: 84  FPRGSPLVSDISRAILKVTEGDRIREIENQWFKK-----------------YRLFEGLFL 143
           FP+ SPL  D+SRAIL VT+G+ ++ IEN+WFKK                    F GLFL
Sbjct: 768 FPKKSPLTDDVSRAILNVTQGEEMQHIENKWFKKPNNCPDLNTSLSSNHLSLSSFWGLFL 827

Query: 144 VTGIASISFVVGYLVVFLYK 147
           + GIAS   ++ ++  FLY+
Sbjct: 828 IAGIASFLALLIFVANFLYE 847

[Close]
BLAST of Csa2G383930 vs. Swiss-Prot
Match: GLR28_ARATH (Glutamate receptor 2.8 OS=Arabidopsis thaliana GN=GLR2.8 PE=2 SV=2)

HSP 1 Score: 80.1 bits (196), Expect = 2.8e-14
Identity = 36/73 (49.32%), Postives = 43/73 (58.90%), Query Frame = 1 

Query: 1   MVVPTKSSKNTSMWAFLKPLTWKLWVVIGCAFVFMPFIVWILEHRVNEKFNGSVVDQIFN 60
           M+VP + ++N + W FLKP    LWV   C FV + F+VW+ EHRVN  F G    QI  
Sbjct: 557 MMVPVRDNENKNTWVFLKPWGLDLWVTTACFFVLIGFVVWLFEHRVNTDFRGPPHHQIGT 616

Query: 61  SLCYSFSTMVFVH 74
           S  +SFSTMVF H
Sbjct: 617 SFWFSFSTMVFAH 629


HSP 2 Score: 64.7 bits (156), Expect = 1.2e-09
Identity = 34/80 (42.50%), Postives = 45/80 (56.25%), Query Frame = 1 

Query: 84  FPRGSPLVSDISRAILKVTEGDRIREIENQWFKK-----------------YRLFEGLFL 143
           FPR SPL  D+S+AIL VT+GD ++ IEN+WF K                  R F GLFL
Sbjct: 763 FPRNSPLTGDVSKAILNVTQGDEMQHIENKWFMKQNDCPDPKTALSSNRLSLRSFWGLFL 822

Query: 144 VTGIASISFVVGYLVVFLYK 147
           + GIAS   ++ ++ +FLY+
Sbjct: 823 IAGIASFLALLIFVFLFLYE 842

[Close]
BLAST of Csa2G383930 vs. Swiss-Prot
Match: GLR35_ARATH (Glutamate receptor 3.5 OS=Arabidopsis thaliana GN=GLR3.5 PE=2 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 9.2e-13
Identity = 35/73 (47.95%), Postives = 45/73 (61.64%), Query Frame = 1 

Query: 1   MVVPTKSSKNTSMWAFLKPLTWKLWVVIGCAFVFMPFIVWILEHRVNEKFNGSVVDQIFN 60
           +V P K +K+ S W+FLKP T ++W V G  F+F+  ++WILEHR NE+F G    QI  
Sbjct: 587 VVAPVKGAKS-SPWSFLKPFTIEMWAVTGALFLFVGAVIWILEHRFNEEFRGPPRRQIIT 646

Query: 61  SLCYSFSTMVFVH 74
              +SFSTM F H
Sbjct: 647 VFWFSFSTMFFSH 658

[Close]
BLAST of Csa2G383930 vs. Swiss-Prot
Match: GLR33_ARATH (Glutamate receptor 3.3 OS=Arabidopsis thaliana GN=GLR3.3 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.6e-12
Identity = 33/73 (45.21%), Postives = 41/73 (56.16%), Query Frame = 1 

Query: 1   MVVPTKSSKNTSMWAFLKPLTWKLWVVIGCAFVFMPFIVWILEHRVNEKFNGSVVDQIFN 60
           +VV      N+  WAFL+P    +W V GC F+F+  +VWILEHR N++F G    Q   
Sbjct: 566 VVVAPFKKLNSGAWAFLRPFNRLMWAVTGCCFLFVGIVVWILEHRTNDEFRGPPKRQCVT 625

Query: 61  SLCYSFSTMVFVH 74
            L +SFSTM F H
Sbjct: 626 ILWFSFSTMFFAH 638


HSP 2 Score: 42.0 bits (97), Expect = 8.6e-03
Identity = 26/78 (33.33%), Postives = 36/78 (46.15%), Query Frame = 1 

Query: 84  FPRGSPLVSDISRAILKVTEGDRIREIENQWFKK----------------YRLFEGLFLV 143
           FPR SPL  D+S AIL++ E   ++ I ++W  K                 + F GLFL+
Sbjct: 776 FPRDSPLAIDLSTAILELAENGDLQRIHDKWLMKNACTLENAELESDRLHLKSFWGLFLI 835

Query: 144 TGIASISFVVGYLVVFLY 146
            G+A +      L +FLY
Sbjct: 836 CGVACL------LALFLY 847

[Close]
BLAST of Csa2G383930 vs. TrEMBL
Match: A0A0A0LQH4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383930 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 7.9e-104
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1 

Query: 1   MVVPTKSSKNTSMWAFLKPLTWKLWVVIGCAFVFMPFIVWILEHRVNEKFNGSVVDQIFN 60
           MVVPTKSSKNTSMWAFLKPLTWKLWVVIGCAFVFMPFIVWILEHRVNEKFNGSVVDQIFN
Sbjct: 1   MVVPTKSSKNTSMWAFLKPLTWKLWVVIGCAFVFMPFIVWILEHRVNEKFNGSVVDQIFN 60

Query: 61  SLCYSFSTMVFVHLNLENLDWEGFPRGSPLVSDISRAILKVTEGDRIREIENQWFKKYRL 120
           SLCYSFSTMVFVHLNLENLDWEGFPRGSPLVSDISRAILKVTEGDRIREIENQWFKKYRL
Sbjct: 61  SLCYSFSTMVFVHLNLENLDWEGFPRGSPLVSDISRAILKVTEGDRIREIENQWFKKYRL 120

Query: 121 FEGLFLVTGIASISFVVGYLVVFLYKELPQSWKPNRSFQTIIVELFSTFLATDDIAIAIG 180
           FEGLFLVTGIASISFVVGYLVVFLYKELPQSWKPNRSFQTIIVELFSTFLATDDIAIAIG
Sbjct: 121 FEGLFLVTGIASISFVVGYLVVFLYKELPQSWKPNRSFQTIIVELFSTFLATDDIAIAIG 180

Query: 181 RSCEHQD 188
           RSCEHQD
Sbjct: 181 RSCEHQD 187

[Close]
BLAST of Csa2G383930 vs. TrEMBL
Match: A0A0A0LPV9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383900 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 5.0e-50
Identity = 123/219 (56.16%), Postives = 140/219 (63.93%), Query Frame = 1 

Query: 1   MVVPTKSSKNTSMWAFLKPLTWKLWVVIGCAFVFMPFIVWILEHRVNEKFNGSVVDQIFN 60
           MVVP  SSKNTS+WAFLKPL+WKLWVVIG +F+ M  IVW LEHRVNE+FNGSVV+QI N
Sbjct: 271 MVVPMNSSKNTSVWAFLKPLSWKLWVVIGNSFLLMAGIVWALEHRVNEEFNGSVVNQICN 330

Query: 61  SLCYSFSTMVFVHLNLEN------LDW----EGFPRGSPLVSDISRAILKVTEGDRIREI 120
           SL YSFSTMVF HL ++       L W    +GFP GSPLV D+SRAILKVTEGDRIREI
Sbjct: 331 SLWYSFSTMVFAHLKIKFIFVTPFLIWCFSGQGFPVGSPLVPDVSRAILKVTEGDRIREI 390

Query: 121 ENQWFKKYRLFEG------------------LFLVTGIASISFVVGYLVVFLYKELPQSW 180
           EN WFKK +                      LF +T   SI  V  Y+V F+ KELPQSW
Sbjct: 391 ENAWFKKVKECSSSEAAELSSSRLTIDSLWVLFAITDGVSILLVFCYVVYFVLKELPQSW 450

Query: 181 KPNR-SFQTIIVELFSTFLATDDIAIAIGR--SCE-HQD 188
              R S       LFS F+ATD+ AI   +  SC  HQD
Sbjct: 451 SAKRPSIWQTWTHLFSRFMATDNEAINRRKRGSCPCHQD 489

[Close]
BLAST of Csa2G383930 vs. TrEMBL
Match: A0A0A0KGS5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G361290 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.8e-28
Identity = 76/164 (46.34%), Postives = 97/164 (59.15%), Query Frame = 1 

Query: 1   MVVPTKSSKNTSMWAFLKPLTWKLWVVIGCAFVFMPFIVWILEHRVNEKFNGSVVDQIFN 60
           MVVPT+ +     W FLKPLT  LW+   C FVFM F+VWILEHR+NE+F G    QI  
Sbjct: 562 MVVPTQGNSKNRAWIFLKPLTLNLWITSFCFFVFMGFVVWILEHRINEEFRGPPSHQIGT 621

Query: 61  SLCYSFSTMVFVHLNLENLDWEGFPRGSPLVSDISRAILKVTEGDRIREIENQWF----- 120
           SL +SF TMVF     E+L    FP GSPLV D+SRA+L VTE +++ +I+N WF     
Sbjct: 622 SLWFSFCTMVFA--QRESL---AFPIGSPLVGDVSRAVLNVTESEKMNQIQNTWFGDQCN 681

Query: 121 --------KKYRL----FEGLFLVTGIASISFVVGYLVVFLYKE 148
                      RL    F GLFL+ G A+I  ++ Y  +F +KE
Sbjct: 682 SLSSGSKVTSSRLSLGSFWGLFLIAGSAAIIALLVYGFIFFHKE 720

[Close]
BLAST of Csa2G383930 vs. TrEMBL
Match: A0A0A0LMA6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383370 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.1e-25
Identity = 70/165 (42.42%), Postives = 89/165 (53.94%), Query Frame = 1 

Query: 1   MVVPTKSSKNTSMWAFLKPLTWKLWVVIGCAFVFMPFIVWILEHRVNEKFNGSVVDQIFN 60
           MVVP  S+KNT+ W F+KPLT  LW + G  F+ M  +VW LEHRVNE+F GS +DQ   
Sbjct: 499 MVVPIMSTKNTNAWVFIKPLTGHLWSLTGGFFLVMALVVWTLEHRVNEEFRGSPLDQ--- 558

Query: 61  SLCYSFSTMVFVHLNLENLDWEGFPRGSPLVSDISRAILKVTEGDRIREIENQWFKKYR- 120
                                 GFP+GSPLV DISRAIL+V E DR+REIEN WFKK + 
Sbjct: 559 ----------------------GFPKGSPLVPDISRAILEVAESDRMREIENAWFKKVQE 618

Query: 121 -----------------LFEGLFLVTGIASISFVVGYLVVFLYKE 148
                             F  LF++    S   V+ Y++ FLY++
Sbjct: 619 CSISDASKLSSTRLSIGSFWALFVIVACVSAVSVICYIIKFLYEQ 638

[Close]
BLAST of Csa2G383930 vs. TrEMBL
Match: A0A0A0LQH2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383390 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.6e-19
Identity = 46/73 (63.01%), Postives = 56/73 (76.71%), Query Frame = 1 

Query: 1   MVVPTKSSKNTSMWAFLKPLTWKLWVVIGCAFVFMPFIVWILEHRVNEKFNGSVVDQIFN 60
           MVVP K+SKNT+ W FLKPLT  LW++    FVF+  ++WILEHRVNE+F GS +DQ+  
Sbjct: 457 MVVPMKNSKNTNAWVFLKPLTLNLWIITAFFFVFVALVIWILEHRVNEQFRGSALDQLCT 516

Query: 61  SLCYSFSTMVFVH 74
           SL YSFSTMVF H
Sbjct: 517 SLWYSFSTMVFAH 529

[Close]
BLAST of Csa2G383930 vs. TAIR10
Match: AT2G29100.1 (AT2G29100.1 glutamate receptor 2.9)

HSP 1 Score: 85.9 bits (211), Expect = 2.9e-17
Identity = 38/73 (52.05%), Postives = 47/73 (64.38%), Query Frame = 1 

Query: 1   MVVPTKSSKNTSMWAFLKPLTWKLWVVIGCAFVFMPFIVWILEHRVNEKFNGSVVDQIFN 60
           M+VP + ++N   W FL+P + +LWV  GC FVF+ F+VW+ EHRVN  F G    QI  
Sbjct: 546 MMVPVRDNENKDTWVFLEPWSLELWVTTGCFFVFIGFVVWLFEHRVNTDFRGPPQYQIGT 605

Query: 61  SLCYSFSTMVFVH 74
           SL +SFSTMVF H
Sbjct: 606 SLWFSFSTMVFAH 618


HSP 2 Score: 47.0 bits (110), Expect = 1.5e-05
Identity = 26/80 (32.50%), Postives = 40/80 (50.00%), Query Frame = 1 

Query: 84  FPRGSPLVSDISRAILKVTEGDRIREIENQWFKK-----------------YRLFEGLFL 143
           FP+ SPL  + SRAIL +T+ +  ++IE++WF K                    F GLFL
Sbjct: 755 FPKNSPLTGEFSRAILNLTQNNVTQQIEDRWFPKKNDCPDPMTALSSNRLNLSSFLGLFL 814

Query: 144 VTGIASISFVVGYLVVFLYK 147
           + G A    ++ ++ +FLY+
Sbjct: 815 IAGTAISFSLLVFVALFLYE 834

[Close]
BLAST of Csa2G383930 vs. TAIR10
Match: AT2G29120.1 (AT2G29120.1 glutamate receptor 2.7)

HSP 1 Score: 80.9 bits (198), Expect = 9.4e-16
Identity = 40/73 (54.79%), Postives = 45/73 (61.64%), Query Frame = 1 

Query: 1   MVVPTKSSKNTSMWAFLKPLTWKLWVVIGCAFVFMPFIVWILEHRVNEKFNGSVVDQIFN 60
           M+VP K +KNT  W FL+P +  LWV   C FVF+ FIVWILEHRVN  F G    QI  
Sbjct: 564 MMVPLKDNKNT--WVFLRPWSLDLWVTTACFFVFIGFIVWILEHRVNTDFRGPPHHQIGT 623

Query: 61  SLCYSFSTMVFVH 74
           S  ++FSTM F H
Sbjct: 624 SFWFAFSTMNFAH 634


HSP 2 Score: 61.2 bits (147), Expect = 7.7e-10
Identity = 33/80 (41.25%), Postives = 44/80 (55.00%), Query Frame = 1 

Query: 84  FPRGSPLVSDISRAILKVTEGDRIREIENQWFKK-----------------YRLFEGLFL 143
           FP+ SPL  D+SRAIL VT+G+ ++ IEN+WFKK                    F GLFL
Sbjct: 768 FPKKSPLTDDVSRAILNVTQGEEMQHIENKWFKKPNNCPDLNTSLSSNHLSLSSFWGLFL 827

Query: 144 VTGIASISFVVGYLVVFLYK 147
           + GIAS   ++ ++  FLY+
Sbjct: 828 IAGIASFLALLIFVANFLYE 847

[Close]
BLAST of Csa2G383930 vs. TAIR10
Match: AT2G29110.1 (AT2G29110.1 glutamate receptor 2.8)

HSP 1 Score: 80.1 bits (196), Expect = 1.6e-15
Identity = 36/73 (49.32%), Postives = 43/73 (58.90%), Query Frame = 1 

Query: 1   MVVPTKSSKNTSMWAFLKPLTWKLWVVIGCAFVFMPFIVWILEHRVNEKFNGSVVDQIFN 60
           M+VP + ++N + W FLKP    LWV   C FV + F+VW+ EHRVN  F G    QI  
Sbjct: 557 MMVPVRDNENKNTWVFLKPWGLDLWVTTACFFVLIGFVVWLFEHRVNTDFRGPPHHQIGT 616

Query: 61  SLCYSFSTMVFVH 74
           S  +SFSTMVF H
Sbjct: 617 SFWFSFSTMVFAH 629


HSP 2 Score: 64.7 bits (156), Expect = 7.0e-11
Identity = 34/80 (42.50%), Postives = 45/80 (56.25%), Query Frame = 1 

Query: 84  FPRGSPLVSDISRAILKVTEGDRIREIENQWFKK-----------------YRLFEGLFL 143
           FPR SPL  D+S+AIL VT+GD ++ IEN+WF K                  R F GLFL
Sbjct: 763 FPRNSPLTGDVSKAILNVTQGDEMQHIENKWFMKQNDCPDPKTALSSNRLSLRSFWGLFL 822

Query: 144 VTGIASISFVVGYLVVFLYK 147
           + GIAS   ++ ++ +FLY+
Sbjct: 823 IAGIASFLALLIFVFLFLYE 842

[Close]
BLAST of Csa2G383930 vs. TAIR10
Match: AT1G42540.1 (AT1G42540.1 glutamate receptor 3.3)

HSP 1 Score: 74.3 bits (181), Expect = 8.8e-14
Identity = 33/73 (45.21%), Postives = 41/73 (56.16%), Query Frame = 1 

Query: 1   MVVPTKSSKNTSMWAFLKPLTWKLWVVIGCAFVFMPFIVWILEHRVNEKFNGSVVDQIFN 60
           +VV      N+  WAFL+P    +W V GC F+F+  +VWILEHR N++F G    Q   
Sbjct: 566 VVVAPFKKLNSGAWAFLRPFNRLMWAVTGCCFLFVGIVVWILEHRTNDEFRGPPKRQCVT 625

Query: 61  SLCYSFSTMVFVH 74
            L +SFSTM F H
Sbjct: 626 ILWFSFSTMFFAH 638


HSP 2 Score: 42.0 bits (97), Expect = 4.8e-04
Identity = 26/78 (33.33%), Postives = 36/78 (46.15%), Query Frame = 1 

Query: 84  FPRGSPLVSDISRAILKVTEGDRIREIENQWFKK----------------YRLFEGLFLV 143
           FPR SPL  D+S AIL++ E   ++ I ++W  K                 + F GLFL+
Sbjct: 776 FPRDSPLAIDLSTAILELAENGDLQRIHDKWLMKNACTLENAELESDRLHLKSFWGLFLI 835

Query: 144 TGIASISFVVGYLVVFLY 146
            G+A +      L +FLY
Sbjct: 836 CGVACL------LALFLY 847

[Close]
BLAST of Csa2G383930 vs. TAIR10
Match: AT1G05200.1 (AT1G05200.1 glutamate receptor 3.4)

HSP 1 Score: 71.2 bits (173), Expect = 7.4e-13
Identity = 34/73 (46.58%), Postives = 45/73 (61.64%), Query Frame = 1 

Query: 1   MVVPTKSSKNTSMWAFLKPLTWKLWVVIGCAFVFMPFIVWILEHRVNEKFNGSVVDQIFN 60
           +V P K +K+ S W+FLKP T ++W V G  F+F+  +VWILEHR N++F G    Q+  
Sbjct: 594 VVAPVKEAKS-SPWSFLKPFTIEMWAVTGGFFLFVGAMVWILEHRFNQEFRGPPRRQLIT 653

Query: 61  SLCYSFSTMVFVH 74
              +SFSTM F H
Sbjct: 654 IFWFSFSTMFFSH 665

[Close]
BLAST of Csa2G383930 vs. NCBI nr
Match: gi|700207903|gb|KGN63022.1| (hypothetical protein Csa_2G383930 [Cucumis sativus])

HSP 1 Score: 384.4 bits (986), Expect = 1.1e-103
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1 

Query: 1   MVVPTKSSKNTSMWAFLKPLTWKLWVVIGCAFVFMPFIVWILEHRVNEKFNGSVVDQIFN 60
           MVVPTKSSKNTSMWAFLKPLTWKLWVVIGCAFVFMPFIVWILEHRVNEKFNGSVVDQIFN
Sbjct: 1   MVVPTKSSKNTSMWAFLKPLTWKLWVVIGCAFVFMPFIVWILEHRVNEKFNGSVVDQIFN 60

Query: 61  SLCYSFSTMVFVHLNLENLDWEGFPRGSPLVSDISRAILKVTEGDRIREIENQWFKKYRL 120
           SLCYSFSTMVFVHLNLENLDWEGFPRGSPLVSDISRAILKVTEGDRIREIENQWFKKYRL
Sbjct: 61  SLCYSFSTMVFVHLNLENLDWEGFPRGSPLVSDISRAILKVTEGDRIREIENQWFKKYRL 120

Query: 121 FEGLFLVTGIASISFVVGYLVVFLYKELPQSWKPNRSFQTIIVELFSTFLATDDIAIAIG 180
           FEGLFLVTGIASISFVVGYLVVFLYKELPQSWKPNRSFQTIIVELFSTFLATDDIAIAIG
Sbjct: 121 FEGLFLVTGIASISFVVGYLVVFLYKELPQSWKPNRSFQTIIVELFSTFLATDDIAIAIG 180

Query: 181 RSCEHQD 188
           RSCEHQD
Sbjct: 181 RSCEHQD 187

[Close]
BLAST of Csa2G383930 vs. NCBI nr
Match: gi|700207900|gb|KGN63019.1| (hypothetical protein Csa_2G383900 [Cucumis sativus])

HSP 1 Score: 205.7 bits (522), Expect = 7.2e-50
Identity = 123/219 (56.16%), Postives = 140/219 (63.93%), Query Frame = 1 

Query: 1   MVVPTKSSKNTSMWAFLKPLTWKLWVVIGCAFVFMPFIVWILEHRVNEKFNGSVVDQIFN 60
           MVVP  SSKNTS+WAFLKPL+WKLWVVIG +F+ M  IVW LEHRVNE+FNGSVV+QI N
Sbjct: 271 MVVPMNSSKNTSVWAFLKPLSWKLWVVIGNSFLLMAGIVWALEHRVNEEFNGSVVNQICN 330

Query: 61  SLCYSFSTMVFVHLNLEN------LDW----EGFPRGSPLVSDISRAILKVTEGDRIREI 120
           SL YSFSTMVF HL ++       L W    +GFP GSPLV D+SRAILKVTEGDRIREI
Sbjct: 331 SLWYSFSTMVFAHLKIKFIFVTPFLIWCFSGQGFPVGSPLVPDVSRAILKVTEGDRIREI 390

Query: 121 ENQWFKKYRLFEG------------------LFLVTGIASISFVVGYLVVFLYKELPQSW 180
           EN WFKK +                      LF +T   SI  V  Y+V F+ KELPQSW
Sbjct: 391 ENAWFKKVKECSSSEAAELSSSRLTIDSLWVLFAITDGVSILLVFCYVVYFVLKELPQSW 450

Query: 181 KPNR-SFQTIIVELFSTFLATDDIAIAIGR--SCE-HQD 188
              R S       LFS F+ATD+ AI   +  SC  HQD
Sbjct: 451 SAKRPSIWQTWTHLFSRFMATDNEAINRRKRGSCPCHQD 489

[Close]
BLAST of Csa2G383930 vs. NCBI nr
Match: gi|778722220|ref|XP_011658435.1| (PREDICTED: LOW QUALITY PROTEIN: glutamate receptor 2.5-like, partial [Cucumis sativus])

HSP 1 Score: 158.3 bits (399), Expect = 1.3e-35
Identity = 87/123 (70.73%), Postives = 89/123 (72.36%), Query Frame = 1 

Query: 83  GFPRGSPLVSDISRAILKVTEGDRIREIENQWFKKYR------------------LFEGL 142
           GFPRG  LV DISR ILKV EGDRIREIEN WFKK R                   FEGL
Sbjct: 579 GFPRGLSLVPDISRVILKVREGDRIREIENAWFKKVRECSSSEAVELSSSRLSIDSFEGL 638

Query: 143 FLVTGIASISFVVGYLVVFLYKELPQSWKPNRSFQTIIVELFSTFLATDDIAIAIGRSCE 188
           FLVTGIAS+SFVV YLVVFLYKELPQSWKPN SFQ II ELFSTFL  DD+AIAI RS E
Sbjct: 639 FLVTGIASMSFVVCYLVVFLYKELPQSWKPNGSFQEIIHELFSTFLTIDDVAIAIRRSLE 698

[Close]
BLAST of Csa2G383930 vs. NCBI nr
Match: gi|778722220|ref|XP_011658435.1| (PREDICTED: LOW QUALITY PROTEIN: glutamate receptor 2.5-like, partial [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 7.7e-28
Identity = 63/71 (88.73%), Postives = 64/71 (90.14%), Query Frame = 1 

Query: 1   MVVPTKSSKNTSMWAFLKPLTWKLWVVIGCAFVFMPFIVWILEHRVNEKFNGSVVDQIFN 60
           MVV  KSSKNTSMWAFLKPLTW LWVVIGCAFVFM  IVW L+HRVNEKFN SVVDQIFN
Sbjct: 370 MVVSMKSSKNTSMWAFLKPLTWXLWVVIGCAFVFMTAIVWTLKHRVNEKFNESVVDQIFN 429

Query: 61  SLCYSFSTMVF 72
           SLCYSFSTMVF
Sbjct: 430 SLCYSFSTMVF 440


HSP 2 Score: 134.0 bits (336), Expect = 2.7e-28
Identity = 73/118 (61.86%), Postives = 81/118 (68.64%), Query Frame = 1 

Query: 83  GFPRGSPLVSDISRAILKVTEGDRIREIENQWFKKYR------------------LFEGL 142
           GFP GSPLV DISRAILKVTEGDRIREIEN WFKK R                   FEGL
Sbjct: 767 GFPIGSPLVPDISRAILKVTEGDRIREIENAWFKKVRECSSSEAAELSSTRLSIDSFEGL 826

Query: 143 FLVTGIASISFVVGYLVVFLYKELPQSWKPNRSFQTIIVELFSTFLATDDIAIAIGRS 183
           FL+T   SISFVVGYLV FLY ELP+SW+ N S  T++  LFSTF+A DD AIA+ +S
Sbjct: 827 FLITAGTSISFVVGYLVYFLYIELPKSWRANPSLWTVLTHLFSTFMAIDDEAIALRKS 884

[Close]
BLAST of Csa2G383930 vs. NCBI nr
Match: gi|659089583|ref|XP_008445588.1| (PREDICTED: glutamate receptor 2.5-like [Cucumis melo])

HSP 1 Score: 133.7 bits (335), Expect = 3.5e-28
Identity = 63/73 (86.30%), Postives = 65/73 (89.04%), Query Frame = 1 

Query: 1   MVVPTKSSKNTSMWAFLKPLTWKLWVVIGCAFVFMPFIVWILEHRVNEKFNGSVVDQIFN 60
           MVVP KSSKNTS+WAFLKPLTWKLWVVIG +FVFM  IVW LEHRVNEKFNGS VDQIFN
Sbjct: 558 MVVPMKSSKNTSVWAFLKPLTWKLWVVIGSSFVFMAVIVWTLEHRVNEKFNGSAVDQIFN 617

Query: 61  SLCYSFSTMVFVH 74
           SL YSFSTMVF H
Sbjct: 618 SLWYSFSTMVFAH 630


HSP 2 Score: 134.0 bits (336), Expect = 2.7e-28
Identity = 76/164 (46.34%), Postives = 97/164 (59.15%), Query Frame = 1 

Query: 1   MVVPTKSSKNTSMWAFLKPLTWKLWVVIGCAFVFMPFIVWILEHRVNEKFNGSVVDQIFN 60
           MVVPT+ +     W FLKPLT  LW+   C FVFM F+VWILEHR+NE+F G    QI  
Sbjct: 562 MVVPTQGNSKNRAWIFLKPLTLNLWITSFCFFVFMGFVVWILEHRINEEFRGPPSHQIGT 621

Query: 61  SLCYSFSTMVFVHLNLENLDWEGFPRGSPLVSDISRAILKVTEGDRIREIENQWF----- 120
           SL +SF TMVF     E+L    FP GSPLV D+SRA+L VTE +++ +I+N WF     
Sbjct: 622 SLWFSFCTMVFA--QRESL---AFPIGSPLVGDVSRAVLNVTESEKMNQIQNTWFGDQCN 681

Query: 121 --------KKYRL----FEGLFLVTGIASISFVVGYLVVFLYKE 148
                      RL    F GLFL+ G A+I  ++ Y  +F +KE
Sbjct: 682 SLSSGSKVTSSRLSLGSFWGLFLIAGSAAIIALLVYGFIFFHKE 720

The following BLAST results are available for this feature:
BLAST of Csa2G383930 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GLR29_ARATH5.2e-1652.05Glutamate receptor 2.9 OS=Arabidopsis thaliana GN=GLR2.9 PE=2 SV=1[more]
GLR27_ARATH1.7e-1454.79Glutamate receptor 2.7 OS=Arabidopsis thaliana GN=GLR2.7 PE=2 SV=3[more]
GLR28_ARATH2.8e-1449.32Glutamate receptor 2.8 OS=Arabidopsis thaliana GN=GLR2.8 PE=2 SV=2[more]
GLR35_ARATH9.2e-1347.95Glutamate receptor 3.5 OS=Arabidopsis thaliana GN=GLR3.5 PE=2 SV=2[more]
GLR33_ARATH1.6e-1245.21Glutamate receptor 3.3 OS=Arabidopsis thaliana GN=GLR3.3 PE=2 SV=1[more]
BLAST of Csa2G383930 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQH4_CUCSA7.9e-104100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383930 PE=4 SV=1[more]
A0A0A0LPV9_CUCSA5.0e-5056.16Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383900 PE=3 SV=1[more]
A0A0A0KGS5_CUCSA1.8e-2846.34Uncharacterized protein OS=Cucumis sativus GN=Csa_6G361290 PE=3 SV=1[more]
A0A0A0LMA6_CUCSA1.1e-2542.42Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383370 PE=3 SV=1[more]
A0A0A0LQH2_CUCSA1.6e-1963.01Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383390 PE=3 SV=1[more]
BLAST of Csa2G383930 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G29100.12.9e-1752.05 glutamate receptor 2.9[more]
AT2G29120.19.4e-1654.79 glutamate receptor 2.7[more]
AT2G29110.11.6e-1549.32 glutamate receptor 2.8[more]
AT1G42540.18.8e-1445.21 glutamate receptor 3.3[more]
AT1G05200.17.4e-1346.58 glutamate receptor 3.4[more]
BLAST of Csa2G383930 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700207903|gb|KGN63022.1|1.1e-103100.00hypothetical protein Csa_2G383930 [Cucumis sativus][more]
gi|700207900|gb|KGN63019.1|7.2e-5056.16hypothetical protein Csa_2G383900 [Cucumis sativus][more]
gi|778722220|ref|XP_011658435.1|1.3e-3570.73PREDICTED: LOW QUALITY PROTEIN: glutamate receptor 2.5-like, partial [Cucumis sa... [more]
gi|778722220|ref|XP_011658435.1|7.7e-2888.73PREDICTED: LOW QUALITY PROTEIN: glutamate receptor 2.5-like, partial [Cucumis sa... [more]
gi|659089583|ref|XP_008445588.1|3.5e-2886.30PREDICTED: glutamate receptor 2.5-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006811 ion transport
biological_process GO:0044763 single-organism cellular process
biological_process GO:0007268 chemical synaptic transmission
biological_process GO:0007165 signal transduction
cellular_component GO:0016020 membrane
molecular_function GO:0005230 extracellular ligand-gated ion channel activity
molecular_function GO:0004970 ionotropic glutamate receptor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G383930.1Csa2G383930.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.10.287.70coord: 9..73
score: 3.
NoneNo IPR availableGENE3DG3DSA:3.40.190.10coord: 83..117
score: 4.
NoneNo IPR availablePANTHERPTHR18966IONOTROPIC GLUTAMATE RECEPTORcoord: 1..151
score: 5.4
NoneNo IPR availablePANTHERPTHR18966:SF204GLUTAMATE RECEPTOR 2.5-RELATEDcoord: 1..151
score: 5.4
NoneNo IPR availableunknownSSF53850Periplasmic binding protein-like IIcoord: 1..116
score: 1.

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G383930Cucsa.163080Cucumber (Gy14) v1cgycuB233
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G383930Cucumber (Gy14) v2cgybcuB057