Csa2G351560 (gene) Cucumber (Chinese Long) v2

NameCsa2G351560
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 16112673 .. 16113189 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGACCTTTCACTCGGAACTGCCCAACTCAACGAGTCCCTCAGGTGAGTCGAAGAACCACCAAGGAGAGTCGTAGAAGCAGGCAGGTACACTACCAAGCACTTCATACGCTAAAGTATGTCCCACTTCAACTCCTTTCATCCCAGCATCTATTTACTTAATTATATTTCAGTCTAATCCATTATTTTGTTTTATTTCTTCACGACAAATTTTCAGATCCTTCGTTTATTTATATTTATGTCTCTCTCTTTCTCTTCTGAAGTTGGTTTTTTTAGTTTTGAAGTTAAAATAAGATCAGGAAGAGAGAAGAAGATAAAGTTCGTAGAAAATTTAATACCGAGAGTATGATGGAAGATTTAGAGAGCAATTGAAGACCAAAGAGATATGGAGTTACCCGCTGCGACCTTATGGGTTCTGGACCTTCAAGCCACAACTCACAGCTCCATTTGGATGCTCAAATCAGCCAGGCGCCTGGTCGCAGGGACTCCTATCATGATCTCCTCCAGCAAAAGCTAA

mRNA sequence

ATGAGACCTTTCACTCGGAACTGCCCAACTCAACGAGTCCCTCAGGTGAGTCGAAGAACCACCAAGGAGAGTCGTAGAAGCAGGCAGAGAGCAATTGAAGACCAAAGAGATATGGAGTTACCCGCTGCGACCTTATGGGTTCTGGACCTTCAAGCCACAACTCACAGCTCCATTTGGATGCTCAAATCAGCCAGGCGCCTGGTCGCAGGGACTCCTATCATGATCTCCTCCAGCAAAAGCTAA

Coding sequence (CDS)

ATGAGACCTTTCACTCGGAACTGCCCAACTCAACGAGTCCCTCAGGTGAGTCGAAGAACCACCAAGGAGAGTCGTAGAAGCAGGCAGAGAGCAATTGAAGACCAAAGAGATATGGAGTTACCCGCTGCGACCTTATGGGTTCTGGACCTTCAAGCCACAACTCACAGCTCCATTTGGATGCTCAAATCAGCCAGGCGCCTGGTCGCAGGGACTCCTATCATGATCTCCTCCAGCAAAAGCTAA

Protein sequence

MRPFTRNCPTQRVPQVSRRTTKESRRSRQRAIEDQRDMELPAATLWVLDLQATTHSSIWMLKSARRLVAGTPIMISSSKS*
BLAST of Csa2G351560 vs. TrEMBL
Match: A0A0A0LKD5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G351560 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 7.9e-37
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1

Query: 1  MRPFTRNCPTQRVPQVSRRTTKESRRSRQRAIEDQRDMELPAATLWVLDLQATTHSSIWM 60
          MRPFTRNCPTQRVPQVSRRTTKESRRSRQRAIEDQRDMELPAATLWVLDLQATTHSSIWM
Sbjct: 1  MRPFTRNCPTQRVPQVSRRTTKESRRSRQRAIEDQRDMELPAATLWVLDLQATTHSSIWM 60

Query: 61 LKSARRLVAGTPIMISSSKS 81
          LKSARRLVAGTPIMISSSKS
Sbjct: 61 LKSARRLVAGTPIMISSSKS 80

BLAST of Csa2G351560 vs. NCBI nr
Match: gi|700207256|gb|KGN62375.1| (hypothetical protein Csa_2G351560 [Cucumis sativus])

HSP 1 Score: 160.6 bits (405), Expect = 1.1e-36
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1

Query: 1  MRPFTRNCPTQRVPQVSRRTTKESRRSRQRAIEDQRDMELPAATLWVLDLQATTHSSIWM 60
          MRPFTRNCPTQRVPQVSRRTTKESRRSRQRAIEDQRDMELPAATLWVLDLQATTHSSIWM
Sbjct: 1  MRPFTRNCPTQRVPQVSRRTTKESRRSRQRAIEDQRDMELPAATLWVLDLQATTHSSIWM 60

Query: 61 LKSARRLVAGTPIMISSSKS 81
          LKSARRLVAGTPIMISSSKS
Sbjct: 61 LKSARRLVAGTPIMISSSKS 80

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LKD5_CUCSA7.9e-37100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G351560 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700207256|gb|KGN62375.1|1.1e-36100.00hypothetical protein Csa_2G351560 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU113369cucumber EST collection version 3.0transcribed_cluster
CU115780cucumber EST collection version 3.0transcribed_cluster
CU149038cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G351560.1Csa2G351560.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU113369CU113369transcribed_cluster
CU115780CU115780transcribed_cluster
CU149038CU149038transcribed_cluster


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None