Csa2G336670 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G336670
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionEukaryotic translation initiation factor 6; contains IPR002769 (Translation initiation factor IF6)
LocationChr2 : 15137494 .. 15141652 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAATAGAAAACTAAAATTACTTGGAAAACCTAGAACCTCTCCCGCTCTCTTTCCCACTCCCACTCCCACTCCCACTCCCTGTACTCTCCCGCCTCTCGCTCTAGTCATTCTCCTCTCGACGACGGCCGCCGCAAACGCAATTTCACTTCTCCTATTGTTTGAGGTAAACTTTCTCCCCTTTTAGTTCTCATCCTAATTCTTCTTCCTTTGCTTCCATTTAATTCATTCATTGAGTTCTTGAACTTTTCTCCTTGATTTTATTACCGAAGTTAGACAAATAGATGTCATCTTTATTCAACAGCTATTTGATAAATCCCTTAAAACTTCGAAAGGGCGATTGTTGTGCATTAGGTTTTAACCGACCTTATGACCTGACCGAATGCATAAGGTAGAAGGACATACCTTCTCACCTGATCTGATTAGGTTGGTTTGATTAAAAAAACTGTAAATAAAACACTCGATTTAGGGTTCGGTTCTTGGTTGGTCCATAATCGAACCGAACCAAACCAAAGCAAACCGTGCACACCCACTAAAAAGCATTACTTGATCCCAAAGAAACAGGAATTTCAAGTGGCCAACTTGGATTTCCTTCTGCCGTCACACCCACGCATTTTGATATTGTATTAAAAATAGGTTTTTTTTGTTAATAAATAATCATAAAATGGGAAGATAATTTTTTTTAAAAAAAATAAAGATGGAAATTGTAAACGGTCACGATCTCTTAAAATTATTTGTAGTTCATTGACAATATTAACCTAAAATTTAAAACAAATTACATATAAATTCTTAAATTACAGCAGCAATAATTATTTCTATATTTGATTAAGATTGGTTATAGATTTTGCCTATAAATGTGGGGTTTACAGTTTATTTTGTAAATTAGGTTTCAATTGGGATCTTTTTGACATAGCGGTTGTGAATTTCTTCTTCATCTTCCTTCTTCAACCTTTTCATGGCGACCAGTAAGTTTATGCTTTACATTCTTTTTTTTTTTTTTTTTTTGTTCTTCTTCTACTTATATATTCTTTTGTTTGTTCTTTTTTAGGGCTTATGTTTGAAAACTCATGTGAAATTGGAGTTTTCTCCAAGCTCACTAATTCGTACTGTCTGGTTGCAATTGGTGGTTCTGAGGATTTCTATAGGTTTTTTCTTTTCCCTTTATTCATTTTATCTTGTGAACTTAACCAATTTCTCAATAAGAATTTTTTTTTTCATGTTTAGTACCTTTGAAGCTGAATTAGGTGCTGTCATTCCCGTGGTTAAAACATCTATTCATGGCACTCGCATTATTGGTCGTCTATGTGCTGGTAAAACTAAAACTCACTCCTTTGTTTATTTTTAATTATTATTTTCATAAGTTAGGGTAACCGTTAATGACGTGAGACCCAATTTATGTGACATTGTTTTTCTTTTAGGAAATAAAAATGGGCTTCTTCTACCACACACCACTACTGACCAAGGTAATCCTTTTTCTATCTTTCTTGTCATATTACGCTCTTGATTTCATAGTTGGGGTACACATTTGTTTTAGTATCTGTGTATCTTTAAGACTAAGAGAGTATTGAATCGGAGTATGTAATTGAAAACAATATTTGAGATTTTGAATTGTGGACTTTCATCATTAAAACCTATATATGCTCATTTTGAACTAAAGGATCGGATTTTATACATTTTTTTAACACCTTTTGCATACATCTCTTTCTTGGTTGGTGTTGGTCTATGTTCATTTTTTTTTTGTGATTACAATCTTGCCGTTTGAATGGCATTATGTATGTTGCTCTTTTGTAATTTCATACCAACAATTAAATTCTGATTGAATGTTTGTCATCAGAAAAACAAATCTAATTTTGCCTTTTTTTTTTGTGTACTAATAATGTCTGACACTGGTTATTTACATGAATGGTTATCTCCTTGGTCAGGAGTTTGAAACTATTGTCATGGATGATTCCATTGTGAGATTGAGTTACCCTTGTATATATTAGGCTTTCCCTATCTCCTTTAATCAATTAATAAAAAAATTCCAGATTTGAATCTTTGTCTTACTCAAGGTTCAAGACTCATCATAAATTCTTTATGTCTATTTGAAATTTCTTATGTAATTTTAGTGGTTACTACCAAATTGGTAAGTGTTTATTATATTTTTCTTTGAAATATCCAATTGCATGACCAATTGGGGTAGTCTTTTTCTTAATTCATTGGATCGGAAAGATACTCCCTTTTTTGTAATTTCTATCTCATTGATAATGTTACTATTTCCTATTAAAAGATCATAGAGGTTGGTTTCTTTTGCTTGCCGGTGTGTGTGGGTGTTATGGGTTTTGTGGGATGAGGGACACAGAAGGGCGTCTAGGGGAGTGGAGAGGGACCAGGTCCCTTGTTCGTTTTCATGTTTCTCTCTCTGCTTCAATTGCGAAGACTTTTTGTAATTATTCTTTAGAAATGAATTTGCATAGTTGGAGCCCCTTCTTGTAAATGGTGTCTTTCCTTTTTGTGGGCTTGGTTTTTTGTATGCCTATGCATTCTTTCATTCTTTTCTCAATTAAAGTGATTTTTTCATCTAAAAAAATCATAGAGGCATTAATTTTTTGTGGGCAGTAAGGATGAGAAATGTACATATGTTTTTTTGAAAAAAAAAGAAAAAGGATGAAAAATAAAGTACCCACATGATTATGAATATAAAAACTTCATCATTATGCAATAATGATTTAATGTCTTGCACATGATTGCTCAAAGTTTTAAGCATTGCCATTATACATGTGTGTTTGCACGAAATTCTTCTGGTTCTTTAATTTTGTGTTATTTAGTGTTGATGTGCATTGCCAAATTATATAATTGACATTCTGTTCCTGTTCTTTGCATTTGAAGAACTCCAGCACTTGAGGAACAGCCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGATTGTCTGCTCTGGGGAATACAATTGCTTGTAATGATCATGTCGCTCTCGCACATACTGATCTTGATCGGGTATTTTTTGACTTATCCTTCCCACTTCACATTATGCTTTCTAGTCACTTTCTATCTCACCATCAGTTTGTCTTAGCTTGTAATCTCTTGAACAGTGATCTCCCATTTCAATTTTTTTAATATCCTAGTTCCTCGAAAATGTTCATGAAATAGCTTGTACCTGCCTCGAAAACAATAGCTTCTTTTGAGCAGTGTGGGTAATTTCTGAACTGAGTGTCAATGTTGAGCACATATTCAAATAAAGACAGGACATGCTACAGAATATGGACTCTTTGATTGGAGTATCTTCTTAAAAAAGTTGTCTTTTGCAAATTATACAACTGGAACTTGAGGCTGCTTTACTTCTGACTTTTGCCATGCATTCCTCTTTTTCTACTAAAAGAATCAAGTTCTCTCGTTGTGATCAGGAAACTGAAGATCTCATTGCTGATGTTCTGGGAGTTGAGGTCTTTAGGCAGACAGTAGCAGGCAACGACCTCGTGGGAAGCTACTGTAGCTTCACAAACAGGGGTGGCTTGGTAATATTAACCTCCTGTGCTCCTTAACCAAGTGTAGTTTCCATATTGAGCTTCATTCCTTCAACTTCATGTAAAAGAATTACCTGAAGTGCAAATATTCTGCAGGTTCATCCACATACATCTATTGAAGATCTAGATGAGCTATCAACTCTTCTTCAGGTCCCATTAGTTGCTGGAACCGTGAATCGTGGAAGTGCGGTGATTGCTGCTGGGTTGACAGCAAATGACTGGACTGCATTTTGTGGTTCAGACACCAGTGCCACCGAGTTATCGGTCATTGAGAGTGTTTTCAAATTGAGGGAGGCTCAACCAAGTTCCATTGTTGAAGAAATGAGGAAGTCACTAATAGACAGTTACGTATGAGGAGGAGCCGTTTCTTCTACTACACCTAAGATCTTGCAAGCAATTAATTGTTATTACTCTTCTGTCTGTATCCTTCTGTTTTACTTAACATTTTGAGTATAAAACTTGACTCTGCACTTACAGTGTTTTGGTCGAAATTGGGGTTCTCCATATTTTCTAATATAGATCTTTTCTGTTTTTGTAATGGTTAACCGAGATTCTATTTGAAATCCCCTTATGTTTCAGTTTGTTCTTCTACTAATAGAGTAATCAAAAAGTGAAAAATAGGAAGTGTAGTTCT

mRNA sequence

ATGGCGACCAGGCTTATGTTTGAAAACTCATGTGAAATTGGAGTTTTCTCCAAGCTCACTAATTCGTACTGTCTGGTTGCAATTGGTGGTTCTGAGGATTTCTATAGTACCTTTGAAGCTGAATTAGGTGCTGTCATTCCCGTGGTTAAAACATCTATTCATGGCACTCGCATTATTGGTCGTCTATGTGCTGGAAATAAAAATGGGCTTCTTCTACCACACACCACTACTGACCAAGAACTCCAGCACTTGAGGAACAGCCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGATTGTCTGCTCTGGGGAATACAATTGCTTGTAATGATCATGTCGCTCTCGCACATACTGATCTTGATCGGGAAACTGAAGATCTCATTGCTGATGTTCTGGGAGTTGAGGTCTTTAGGCAGACAGTAGCAGGCAACGACCTCGTGGGAAGCTACTGTAGCTTCACAAACAGGGGTGGCTTGGTTCATCCACATACATCTATTGAAGATCTAGATGAGCTATCAACTCTTCTTCAGGTCCCATTAGTTGCTGGAACCGTGAATCGTGGAAGTGCGGTGATTGCTGCTGGGTTGACAGCAAATGACTGGACTGCATTTTGTGGTTCAGACACCAGTGCCACCGAGTTATCGGTCATTGAGAGTGTTTTCAAATTGAGGGAGGCTCAACCAAGTTCCATTGTTGAAGAAATGAGGAAGTCACTAATAGACAGTTACGTATGA

Coding sequence (CDS)

ATGGCGACCAGGCTTATGTTTGAAAACTCATGTGAAATTGGAGTTTTCTCCAAGCTCACTAATTCGTACTGTCTGGTTGCAATTGGTGGTTCTGAGGATTTCTATAGTACCTTTGAAGCTGAATTAGGTGCTGTCATTCCCGTGGTTAAAACATCTATTCATGGCACTCGCATTATTGGTCGTCTATGTGCTGGAAATAAAAATGGGCTTCTTCTACCACACACCACTACTGACCAAGAACTCCAGCACTTGAGGAACAGCCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGATTGTCTGCTCTGGGGAATACAATTGCTTGTAATGATCATGTCGCTCTCGCACATACTGATCTTGATCGGGAAACTGAAGATCTCATTGCTGATGTTCTGGGAGTTGAGGTCTTTAGGCAGACAGTAGCAGGCAACGACCTCGTGGGAAGCTACTGTAGCTTCACAAACAGGGGTGGCTTGGTTCATCCACATACATCTATTGAAGATCTAGATGAGCTATCAACTCTTCTTCAGGTCCCATTAGTTGCTGGAACCGTGAATCGTGGAAGTGCGGTGATTGCTGCTGGGTTGACAGCAAATGACTGGACTGCATTTTGTGGTTCAGACACCAGTGCCACCGAGTTATCGGTCATTGAGAGTGTTTTCAAATTGAGGGAGGCTCAACCAAGTTCCATTGTTGAAGAAATGAGGAAGTCACTAATAGACAGTTACGTATGA

Protein sequence

MATRLMFENSCEIGVFSKLTNSYCLVAIGGSEDFYSTFEAELGAVIPVVKTSIHGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTDLDRETEDLIADVLGVEVFRQTVAGNDLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSAVIAAGLTANDWTAFCGSDTSATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV*
Homology
[Close]
BLAST of Csa2G336670 vs. Swiss-Prot
Match: IF62_ARATH (Eukaryotic translation initiation factor 6-2 OS=Arabidopsis thaliana GN=EIF6-2 PE=2 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 1.5e-119
Identity = 209/245 (85.31%), Postives = 232/245 (94.69%), Query Frame = 1 

Query: 1   MATRLMFENSCEIGVFSKLTNSYCLVAIGGSEDFYSTFEAELGAVIPVVKTSIHGTRIIG 60
           MATRL FEN+CE+GVFSKLTN+YCLVAIGGSE+FYS FE+EL  VIP+VKTSI GTRIIG
Sbjct: 1   MATRLQFENNCEVGVFSKLTNAYCLVAIGGSENFYSAFESELADVIPIVKTSIGGTRIIG 60

Query: 61  RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           RLCAGNKNGLL+PHTTTDQELQHLRNSLPDQVVVQRI ERLSALGN IACND+VALAHTD
Sbjct: 61  RLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIDERLSALGNCIACNDYVALAHTD 120

Query: 121 LDRETEDLIADVLGVEVFRQTVAGNDLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LD+ETE++IADVLGVEVFRQT+AGN LVGSYC+ +N+GG+VHPHTS+EDL+ELSTLLQVP
Sbjct: 121 LDKETEEIIADVLGVEVFRQTIAGNILVGSYCALSNKGGMVHPHTSVEDLEELSTLLQVP 180

Query: 181 LVAGTVNRGSAVIAAGLTANDWTAFCGSDTSATELSVIESVFKLREAQPSSIVEEMRKSL 240
           LVAGTVNRGS VIAAG+T NDWT+FCGSDT+ATELSVI+S+FKLREAQPSSIV+EMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGMTVNDWTSFCGSDTTATELSVIDSIFKLREAQPSSIVDEMRKSL 240

Query: 241 IDSYV 246
           ID+YV
Sbjct: 241 IDTYV 245

[Close]
BLAST of Csa2G336670 vs. Swiss-Prot
Match: IF6_BOVIN (Eukaryotic translation initiation factor 6 OS=Bos taurus GN=EIF6 PE=2 SV=2)

HSP 1 Score: 362.1 bits (928), Expect = 4.9e-99
Identity = 178/243 (73.25%), Postives = 201/243 (82.72%), Query Frame = 1 

Query: 1   MATRLMFENSCEIGVFSKLTNSYCLVAIGGSEDFYSTFEAELGAVIPVVKTSIHGTRIIG 60
           MA R  FEN+CEIG F+KLTNSYCLVAIGGSE+FYS FE EL   IPVV  SI G RIIG
Sbjct: 1   MAVRASFENNCEIGCFAKLTNSYCLVAIGGSENFYSVFEGELAGTIPVVHASIAGCRIIG 60

Query: 61  RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           R+C GN++GLL+P+ TTDQELQH+RN LPD V ++R++ERLSALGN   CND+VAL H D
Sbjct: 61  RMCVGNRHGLLVPNNTTDQELQHIRNCLPDSVQIRRVEERLSALGNVTTCNDYVALVHPD 120

Query: 121 LDRETEDLIADVLGVEVFRQTVAGNDLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETE+++ADVL VEVFRQTVA   LVGSYC F+N+GGLVHP TSIED DELS+LLQVP
Sbjct: 121 LDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVP 180

Query: 181 LVAGTVNRGSAVIAAGLTANDWTAFCGSDTSATELSVIESVFKLREAQPSSIVEEMRKSL 240
           LVAGTVNRGS VIAAG+  NDW AFCG DT++TELSV+ESVFKL EAQPS+I   MR SL
Sbjct: 181 LVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAQPSTIATSMRDSL 240

Query: 241 IDS 244
           IDS
Sbjct: 241 IDS 243

[Close]
BLAST of Csa2G336670 vs. Swiss-Prot
Match: IF6_HUMAN (Eukaryotic translation initiation factor 6 OS=Homo sapiens GN=EIF6 PE=1 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 6.4e-99
Identity = 178/243 (73.25%), Postives = 202/243 (83.13%), Query Frame = 1 

Query: 1   MATRLMFENSCEIGVFSKLTNSYCLVAIGGSEDFYSTFEAELGAVIPVVKTSIHGTRIIG 60
           MA R  FEN+CEIG F+KLTN+YCLVAIGGSE+FYS FE EL   IPVV  SI G RIIG
Sbjct: 1   MAVRASFENNCEIGCFAKLTNTYCLVAIGGSENFYSVFEGELSDTIPVVHASIAGCRIIG 60

Query: 61  RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           R+C GN++GLL+P+ TTDQELQH+RNSLPD V ++R++ERLSALGN   CND+VAL H D
Sbjct: 61  RMCVGNRHGLLVPNNTTDQELQHIRNSLPDTVQIRRVEERLSALGNVTTCNDYVALVHPD 120

Query: 121 LDRETEDLIADVLGVEVFRQTVAGNDLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETE+++ADVL VEVFRQTVA   LVGSYC F+N+GGLVHP TSIED DELS+LLQVP
Sbjct: 121 LDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVP 180

Query: 181 LVAGTVNRGSAVIAAGLTANDWTAFCGSDTSATELSVIESVFKLREAQPSSIVEEMRKSL 240
           LVAGTVNRGS VIAAG+  NDW AFCG DT++TELSV+ESVFKL EAQPS+I   MR SL
Sbjct: 181 LVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAQPSTIATSMRDSL 240

Query: 241 IDS 244
           IDS
Sbjct: 241 IDS 243

[Close]
BLAST of Csa2G336670 vs. Swiss-Prot
Match: IF6_RAT (Eukaryotic translation initiation factor 6 OS=Rattus norvegicus GN=Eif6 PE=1 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 1.9e-98
Identity = 176/243 (72.43%), Postives = 202/243 (83.13%), Query Frame = 1 

Query: 1   MATRLMFENSCEIGVFSKLTNSYCLVAIGGSEDFYSTFEAELGAVIPVVKTSIHGTRIIG 60
           MA R  FEN+CE+G F+KLTN+YCLVAIGGSE+FYS FE EL   IPVV  SI G RIIG
Sbjct: 1   MAVRASFENNCEVGCFAKLTNTYCLVAIGGSENFYSVFEGELSDTIPVVHASIAGCRIIG 60

Query: 61  RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           R+C GN++GLL+P+ TTDQELQH+RNSLPD V ++R++ERLSALGN   CND+VAL H D
Sbjct: 61  RMCVGNRHGLLVPNNTTDQELQHIRNSLPDSVQIRRVEERLSALGNVTTCNDYVALVHPD 120

Query: 121 LDRETEDLIADVLGVEVFRQTVAGNDLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETE+++ADVL VEVFRQTVA   LVGSYC F+N+GGLVHP TSIED DELS+LLQVP
Sbjct: 121 LDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVP 180

Query: 181 LVAGTVNRGSAVIAAGLTANDWTAFCGSDTSATELSVIESVFKLREAQPSSIVEEMRKSL 240
           LVAGTVNRGS VIAAG+  NDW AFCG DT++TELSV+ESVFKL EA+PS+I   MR SL
Sbjct: 181 LVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSMRDSL 240

Query: 241 IDS 244
           IDS
Sbjct: 241 IDS 243

[Close]
BLAST of Csa2G336670 vs. Swiss-Prot
Match: IF6_MOUSE (Eukaryotic translation initiation factor 6 OS=Mus musculus GN=Eif6 PE=1 SV=2)

HSP 1 Score: 360.1 bits (923), Expect = 1.9e-98
Identity = 176/243 (72.43%), Postives = 202/243 (83.13%), Query Frame = 1 

Query: 1   MATRLMFENSCEIGVFSKLTNSYCLVAIGGSEDFYSTFEAELGAVIPVVKTSIHGTRIIG 60
           MA R  FEN+CE+G F+KLTN+YCLVAIGGSE+FYS FE EL   IPVV  SI G RIIG
Sbjct: 1   MAVRASFENNCEVGCFAKLTNAYCLVAIGGSENFYSVFEGELSDAIPVVHASIAGCRIIG 60

Query: 61  RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           R+C GN++GLL+P+ TTDQELQH+RNSLPD V ++R++ERLSALGN   CND+VAL H D
Sbjct: 61  RMCVGNRHGLLVPNNTTDQELQHIRNSLPDSVQIRRVEERLSALGNVTTCNDYVALVHPD 120

Query: 121 LDRETEDLIADVLGVEVFRQTVAGNDLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETE+++ADVL VEVFRQTVA   LVGSYC F+N+GGLVHP TSIED DELS+LLQVP
Sbjct: 121 LDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVP 180

Query: 181 LVAGTVNRGSAVIAAGLTANDWTAFCGSDTSATELSVIESVFKLREAQPSSIVEEMRKSL 240
           LVAGTVNRGS VIAAG+  NDW AFCG DT++TELSV+ESVFKL EA+PS+I   MR SL
Sbjct: 181 LVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSMRDSL 240

Query: 241 IDS 244
           IDS
Sbjct: 241 IDS 243

[Close]
BLAST of Csa2G336670 vs. TrEMBL
Match: A0A0A0LJY3_CUCSA (Eukaryotic translation initiation factor 6 OS=Cucumis sativus GN=EIF6 PE=3 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 2.1e-133
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 1 

Query: 1   MATRLMFENSCEIGVFSKLTNSYCLVAIGGSEDFYSTFEAELGAVIPVVKTSIHGTRIIG 60
           MATRLMFENSCEIGVFSKLTNSYCLVAIGGSEDFYSTFEAELGAVIPVVKTSIHGTRIIG
Sbjct: 1   MATRLMFENSCEIGVFSKLTNSYCLVAIGGSEDFYSTFEAELGAVIPVVKTSIHGTRIIG 60

Query: 61  RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD
Sbjct: 61  RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120

Query: 121 LDRETEDLIADVLGVEVFRQTVAGNDLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETEDLIADVLGVEVFRQTVAGNDLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP
Sbjct: 121 LDRETEDLIADVLGVEVFRQTVAGNDLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180

Query: 181 LVAGTVNRGSAVIAAGLTANDWTAFCGSDTSATELSVIESVFKLREAQPSSIVEEMRKSL 240
           LVAGTVNRGSAVIAAGLTANDWTAFCGSDTSATELSVIESVFKLREAQPSSIVEEMRKSL
Sbjct: 181 LVAGTVNRGSAVIAAGLTANDWTAFCGSDTSATELSVIESVFKLREAQPSSIVEEMRKSL 240

Query: 241 IDSYV 246
           IDSYV
Sbjct: 241 IDSYV 245

[Close]
BLAST of Csa2G336670 vs. TrEMBL
Match: A0A067FVY8_CITSI (Eukaryotic translation initiation factor 6 OS=Citrus sinensis GN=EIF6 PE=3 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 4.4e-123
Identity = 224/245 (91.43%), Postives = 235/245 (95.92%), Query Frame = 1 

Query: 1   MATRLMFENSCEIGVFSKLTNSYCLVAIGGSEDFYSTFEAELGAVIPVVKTSIHGTRIIG 60
           MATRLMFENSCE+GVFSKLTN+YCLVAIGGSE FYSTFEAEL  V PVVKTSI GTRIIG
Sbjct: 1   MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIG 60

Query: 61  RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRI+ERLSALGN IACNDHVAL HTD
Sbjct: 61  RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTD 120

Query: 121 LDRETEDLIADVLGVEVFRQTVAGNDLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETE++IADVLGVEVFRQT+AGN LVGSYCSF+NRGGLVHPHTSIEDLDELSTLLQVP
Sbjct: 121 LDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVP 180

Query: 181 LVAGTVNRGSAVIAAGLTANDWTAFCGSDTSATELSVIESVFKLREAQPSSIVEEMRKSL 240
           LVAGTVNRGS VIAAGLT NDWTAFCGSDT+ATELSVIESVFKLREAQPS++V+EMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPSALVDEMRKSL 240

Query: 241 IDSYV 246
           IDSYV
Sbjct: 241 IDSYV 245

[Close]
BLAST of Csa2G336670 vs. TrEMBL
Match: V4SN16_9ROSI (Eukaryotic translation initiation factor 6 OS=Citrus clementina GN=EIF6 PE=3 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 5.8e-123
Identity = 224/245 (91.43%), Postives = 235/245 (95.92%), Query Frame = 1 

Query: 1   MATRLMFENSCEIGVFSKLTNSYCLVAIGGSEDFYSTFEAELGAVIPVVKTSIHGTRIIG 60
           MATRLMFENSCE+GVFSKL N+YCLVAIGGSE FYSTFEAEL  VIPVVKTSI GTRIIG
Sbjct: 1   MATRLMFENSCEVGVFSKLANAYCLVAIGGSESFYSTFEAELADVIPVVKTSIGGTRIIG 60

Query: 61  RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRI+ERLSALGN IACNDHVAL HTD
Sbjct: 61  RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTD 120

Query: 121 LDRETEDLIADVLGVEVFRQTVAGNDLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETE++IADVLGVEVFRQT+AGN LVGSYCSF+NRGGLVHPHTSIEDLDELSTLLQVP
Sbjct: 121 LDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVP 180

Query: 181 LVAGTVNRGSAVIAAGLTANDWTAFCGSDTSATELSVIESVFKLREAQPSSIVEEMRKSL 240
           LVAGTVNRGS VIAAGLT NDWTAFCGSDT+ATELSVIESVFKLREAQPS++V+EMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPSALVDEMRKSL 240

Query: 241 IDSYV 246
           IDSYV
Sbjct: 241 IDSYV 245

[Close]
BLAST of Csa2G336670 vs. TrEMBL
Match: A0A067K2E7_JATCU (Eukaryotic translation initiation factor 6 OS=Jatropha curcas GN=EIF6 PE=3 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 2.9e-122
Identity = 222/245 (90.61%), Postives = 235/245 (95.92%), Query Frame = 1 

Query: 1   MATRLMFENSCEIGVFSKLTNSYCLVAIGGSEDFYSTFEAELGAVIPVVKTSIHGTRIIG 60
           MATRLMFENSCE+GVFSKLTN+YCLVAIGGSE FYSTFEAEL  VIPVVKTSI GTRI+G
Sbjct: 1   MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPVVKTSIAGTRIVG 60

Query: 61  RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           RLCAGNKNGLLLPHTTTDQELQHLRNSLPD VVVQRI+E+LSALGN IACNDHVAL HTD
Sbjct: 61  RLCAGNKNGLLLPHTTTDQELQHLRNSLPDNVVVQRIEEKLSALGNCIACNDHVALTHTD 120

Query: 121 LDRETEDLIADVLGVEVFRQTVAGNDLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETE++IADVLGVEVFRQTVAGN LVGSYC+F+NRGGLVHPHTSIEDLDELSTLLQVP
Sbjct: 121 LDRETEEMIADVLGVEVFRQTVAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVP 180

Query: 181 LVAGTVNRGSAVIAAGLTANDWTAFCGSDTSATELSVIESVFKLREAQPSSIVEEMRKSL 240
           LVAGTVNRGS VIAAG+T NDWTAFCGSDT+ATELSVIESVFKLREAQPS+IV+EMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLREAQPSAIVDEMRKSL 240

Query: 241 IDSYV 246
           IDSYV
Sbjct: 241 IDSYV 245

[Close]
BLAST of Csa2G336670 vs. TrEMBL
Match: A0A0A0M1J5_CUCSA (Eukaryotic translation initiation factor 6 OS=Cucumis sativus GN=EIF6 PE=3 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 3.8e-122
Identity = 225/245 (91.84%), Postives = 236/245 (96.33%), Query Frame = 1 

Query: 1   MATRLMFENSCEIGVFSKLTNSYCLVAIGGSEDFYSTFEAELGAVIPVVKTSIHGTRIIG 60
           MA RLMFENSC+IGVFSKLTN+YCLVAIGGSE+FYSTFE E+  VIPVVK SI GTRIIG
Sbjct: 1   MAIRLMFENSCDIGVFSKLTNAYCLVAIGGSENFYSTFETEIRGVIPVVKASIGGTRIIG 60

Query: 61  RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           RLCAGNKNGLL+PHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAH+D
Sbjct: 61  RLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHSD 120

Query: 121 LDRETEDLIADVLGVEVFRQTVAGNDLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETE+LIADVLGVEVFRQTVAGN LVGSY SFTNRGGLVHPHTS+EDLDELSTLLQVP
Sbjct: 121 LDRETEELIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVP 180

Query: 181 LVAGTVNRGSAVIAAGLTANDWTAFCGSDTSATELSVIESVFKLREAQPSSIVEEMRKSL 240
           LVAGTVNRGS VIAAGLTANDWTAFCGSDT+ATELSVIE+VFKLREAQPSSIVEEMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSL 240

Query: 241 IDSYV 246
           IDS+V
Sbjct: 241 IDSHV 245

[Close]
BLAST of Csa2G336670 vs. TAIR10
Match: AT3G55620.1 (AT3G55620.1 Translation initiation factor IF6)

HSP 1 Score: 430.3 bits (1105), Expect = 8.3e-121
Identity = 209/245 (85.31%), Postives = 232/245 (94.69%), Query Frame = 1 

Query: 1   MATRLMFENSCEIGVFSKLTNSYCLVAIGGSEDFYSTFEAELGAVIPVVKTSIHGTRIIG 60
           MATRL FEN+CE+GVFSKLTN+YCLVAIGGSE+FYS FE+EL  VIP+VKTSI GTRIIG
Sbjct: 1   MATRLQFENNCEVGVFSKLTNAYCLVAIGGSENFYSAFESELADVIPIVKTSIGGTRIIG 60

Query: 61  RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           RLCAGNKNGLL+PHTTTDQELQHLRNSLPDQVVVQRI ERLSALGN IACND+VALAHTD
Sbjct: 61  RLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIDERLSALGNCIACNDYVALAHTD 120

Query: 121 LDRETEDLIADVLGVEVFRQTVAGNDLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LD+ETE++IADVLGVEVFRQT+AGN LVGSYC+ +N+GG+VHPHTS+EDL+ELSTLLQVP
Sbjct: 121 LDKETEEIIADVLGVEVFRQTIAGNILVGSYCALSNKGGMVHPHTSVEDLEELSTLLQVP 180

Query: 181 LVAGTVNRGSAVIAAGLTANDWTAFCGSDTSATELSVIESVFKLREAQPSSIVEEMRKSL 240
           LVAGTVNRGS VIAAG+T NDWT+FCGSDT+ATELSVI+S+FKLREAQPSSIV+EMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGMTVNDWTSFCGSDTTATELSVIDSIFKLREAQPSSIVDEMRKSL 240

Query: 241 IDSYV 246
           ID+YV
Sbjct: 241 IDTYV 245

[Close]
BLAST of Csa2G336670 vs. TAIR10
Match: AT2G39820.1 (AT2G39820.1 Translation initiation factor IF6)

HSP 1 Score: 336.7 bits (862), Expect = 1.2e-92
Identity = 164/247 (66.40%), Postives = 206/247 (83.40%), Query Frame = 1 

Query: 1   MATRLMFENS-CEIGVFSKLTNSYCLV-AIGGSEDFYSTFEAELGAVIPVVKTSIHGTRI 60
           MATRL ++N+ CEIGVFSKLTN+YCLV A   S +F++ +E++L  VIP+V TSI G+  
Sbjct: 1   MATRLQYDNNNCEIGVFSKLTNAYCLVSATSASANFFTGYESKLKGVIPIVTTSIGGSGT 60

Query: 61  IGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAH 120
           IG LC GNKNGLLL HT TDQELQHLR+SLPD+VVVQRI+E + ALGN IACND+VAL H
Sbjct: 61  IGSLCVGNKNGLLLSHTITDQELQHLRDSLPDEVVVQRIEEPICALGNAIACNDYVALVH 120

Query: 121 TDLDRETEDLIADVLGVEVFRQTVAGNDLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQ 180
             L+++TE++I+DVLGVEV+RQT+A N+LVGSYCS +N GG+VH +T++E++ EL+ L+Q
Sbjct: 121 PKLEKDTEEIISDVLGVEVYRQTIANNELVGSYCSLSNNGGMVHSNTNVEEMVELANLVQ 180

Query: 181 VPLVAGTVNRGSAVIAAGLTANDWTAFCGSDTSATELSVIESVFKLREAQPSSIVEEMRK 240
           VPLVAGTVNRGS VI+AGLT NDWTAFCGSDT+A ELSV+ ++FKL ++QP  +  EMRK
Sbjct: 181 VPLVAGTVNRGSQVISAGLTVNDWTAFCGSDTTAVELSVVNNIFKLVQSQPDFVGSEMRK 240

Query: 241 SLIDSYV 246
           SLID+YV
Sbjct: 241 SLIDTYV 247

[Close]
BLAST of Csa2G336670 vs. NCBI nr
Match: gi|659099525|ref|XP_008450645.1| (PREDICTED: eukaryotic translation initiation factor 6-2 [Cucumis melo])

HSP 1 Score: 451.4 bits (1160), Expect = 9.8e-124
Identity = 228/245 (93.06%), Postives = 236/245 (96.33%), Query Frame = 1 

Query: 1   MATRLMFENSCEIGVFSKLTNSYCLVAIGGSEDFYSTFEAELGAVIPVVKTSIHGTRIIG 60
           MATRLMFENSCEIGVFSKLTN+YCLVAIGGSE+FYS FE EL  VIPVVK SI GTRIIG
Sbjct: 1   MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELRGVIPVVKASIGGTRIIG 60

Query: 61  RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           RLCAGNKNGLL+PHTTTDQELQHLRNSLPDQVV+QRIQERLSALGNTI+CNDHVALAHTD
Sbjct: 61  RLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVIQRIQERLSALGNTISCNDHVALAHTD 120

Query: 121 LDRETEDLIADVLGVEVFRQTVAGNDLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETEDLIADVLGVEVFRQTVAGN LVGSY SFTNRGGLVHPHTS+EDLDELSTLLQVP
Sbjct: 121 LDRETEDLIADVLGVEVFRQTVAGNVLVGSYSSFTNRGGLVHPHTSVEDLDELSTLLQVP 180

Query: 181 LVAGTVNRGSAVIAAGLTANDWTAFCGSDTSATELSVIESVFKLREAQPSSIVEEMRKSL 240
           LVAGTVNRGS VIAAGLTANDWTAFCGSDT+ATELSVIE+VFKLREAQPSSIVEEMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIENVFKLREAQPSSIVEEMRKSL 240

Query: 241 IDSYV 246
           IDSYV
Sbjct: 241 IDSYV 245

[Close]
BLAST of Csa2G336670 vs. NCBI nr
Match: gi|568825493|ref|XP_006467112.1| (PREDICTED: eukaryotic translation initiation factor 6-2 [Citrus sinensis])

HSP 1 Score: 450.3 bits (1157), Expect = 2.2e-123
Identity = 225/245 (91.84%), Postives = 236/245 (96.33%), Query Frame = 1 

Query: 1   MATRLMFENSCEIGVFSKLTNSYCLVAIGGSEDFYSTFEAELGAVIPVVKTSIHGTRIIG 60
           MATRLMFENSCE+GVFSKLTN+YCLVAIGGSE FYSTFEAEL  VIPVVKTSI GTRIIG
Sbjct: 1   MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPVVKTSIGGTRIIG 60

Query: 61  RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRI+ERLSALGN IACNDHVAL HTD
Sbjct: 61  RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTD 120

Query: 121 LDRETEDLIADVLGVEVFRQTVAGNDLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETE++IADVLGVEVFRQT+AGN LVGSYCSF+NRGGLVHPHTSIEDLDELSTLLQVP
Sbjct: 121 LDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVP 180

Query: 181 LVAGTVNRGSAVIAAGLTANDWTAFCGSDTSATELSVIESVFKLREAQPSSIVEEMRKSL 240
           LVAGTVNRGS VIAAGLT NDWTAFCGSDT+ATELSVIESVFKLREAQPS++V+EMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPSALVDEMRKSL 240

Query: 241 IDSYV 246
           IDSYV
Sbjct: 241 IDSYV 245

[Close]
BLAST of Csa2G336670 vs. NCBI nr
Match: gi|641852694|gb|KDO71559.1| (hypothetical protein CISIN_1g0259812mg [Citrus sinensis])

HSP 1 Score: 448.7 bits (1153), Expect = 6.4e-123
Identity = 224/245 (91.43%), Postives = 235/245 (95.92%), Query Frame = 1 

Query: 1   MATRLMFENSCEIGVFSKLTNSYCLVAIGGSEDFYSTFEAELGAVIPVVKTSIHGTRIIG 60
           MATRLMFENSCE+GVFSKLTN+YCLVAIGGSE FYSTFEAEL  V PVVKTSI GTRIIG
Sbjct: 1   MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIG 60

Query: 61  RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRI+ERLSALGN IACNDHVAL HTD
Sbjct: 61  RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTD 120

Query: 121 LDRETEDLIADVLGVEVFRQTVAGNDLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETE++IADVLGVEVFRQT+AGN LVGSYCSF+NRGGLVHPHTSIEDLDELSTLLQVP
Sbjct: 121 LDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVP 180

Query: 181 LVAGTVNRGSAVIAAGLTANDWTAFCGSDTSATELSVIESVFKLREAQPSSIVEEMRKSL 240
           LVAGTVNRGS VIAAGLT NDWTAFCGSDT+ATELSVIESVFKLREAQPS++V+EMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPSALVDEMRKSL 240

Query: 241 IDSYV 246
           IDSYV
Sbjct: 241 IDSYV 245

[Close]
BLAST of Csa2G336670 vs. NCBI nr
Match: gi|567865247|ref|XP_006425246.1| (hypothetical protein CICLE_v10026354mg [Citrus clementina])

HSP 1 Score: 448.4 bits (1152), Expect = 8.3e-123
Identity = 224/245 (91.43%), Postives = 235/245 (95.92%), Query Frame = 1 

Query: 1   MATRLMFENSCEIGVFSKLTNSYCLVAIGGSEDFYSTFEAELGAVIPVVKTSIHGTRIIG 60
           MATRLMFENSCE+GVFSKL N+YCLVAIGGSE FYSTFEAEL  VIPVVKTSI GTRIIG
Sbjct: 1   MATRLMFENSCEVGVFSKLANAYCLVAIGGSESFYSTFEAELADVIPVVKTSIGGTRIIG 60

Query: 61  RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRI+ERLSALGN IACNDHVAL HTD
Sbjct: 61  RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTD 120

Query: 121 LDRETEDLIADVLGVEVFRQTVAGNDLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETE++IADVLGVEVFRQT+AGN LVGSYCSF+NRGGLVHPHTSIEDLDELSTLLQVP
Sbjct: 121 LDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVP 180

Query: 181 LVAGTVNRGSAVIAAGLTANDWTAFCGSDTSATELSVIESVFKLREAQPSSIVEEMRKSL 240
           LVAGTVNRGS VIAAGLT NDWTAFCGSDT+ATELSVIESVFKLREAQPS++V+EMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPSALVDEMRKSL 240

Query: 241 IDSYV 246
           IDSYV
Sbjct: 241 IDSYV 245

[Close]
BLAST of Csa2G336670 vs. NCBI nr
Match: gi|802731925|ref|XP_012086279.1| (PREDICTED: eukaryotic translation initiation factor 6-2 [Jatropha curcas])

HSP 1 Score: 446.0 bits (1146), Expect = 4.1e-122
Identity = 222/245 (90.61%), Postives = 235/245 (95.92%), Query Frame = 1 

Query: 1   MATRLMFENSCEIGVFSKLTNSYCLVAIGGSEDFYSTFEAELGAVIPVVKTSIHGTRIIG 60
           MATRLMFENSCE+GVFSKLTN+YCLVAIGGSE FYSTFEAEL  VIPVVKTSI GTRI+G
Sbjct: 1   MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPVVKTSIAGTRIVG 60

Query: 61  RLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTD 120
           RLCAGNKNGLLLPHTTTDQELQHLRNSLPD VVVQRI+E+LSALGN IACNDHVAL HTD
Sbjct: 61  RLCAGNKNGLLLPHTTTDQELQHLRNSLPDNVVVQRIEEKLSALGNCIACNDHVALTHTD 120

Query: 121 LDRETEDLIADVLGVEVFRQTVAGNDLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVP 180
           LDRETE++IADVLGVEVFRQTVAGN LVGSYC+F+NRGGLVHPHTSIEDLDELSTLLQVP
Sbjct: 121 LDRETEEMIADVLGVEVFRQTVAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVP 180

Query: 181 LVAGTVNRGSAVIAAGLTANDWTAFCGSDTSATELSVIESVFKLREAQPSSIVEEMRKSL 240
           LVAGTVNRGS VIAAG+T NDWTAFCGSDT+ATELSVIESVFKLREAQPS+IV+EMRKSL
Sbjct: 181 LVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLREAQPSAIVDEMRKSL 240

Query: 241 IDSYV 246
           IDSYV
Sbjct: 241 IDSYV 245

The following BLAST results are available for this feature:
BLAST of Csa2G336670 vs. Swiss-Prot
Match NameE-valueIdentityDescription
IF62_ARATH1.5e-11985.31Eukaryotic translation initiation factor 6-2 OS=Arabidopsis thaliana GN=EIF6-2 P... [more]
IF6_BOVIN4.9e-9973.25Eukaryotic translation initiation factor 6 OS=Bos taurus GN=EIF6 PE=2 SV=2[more]
IF6_HUMAN6.4e-9973.25Eukaryotic translation initiation factor 6 OS=Homo sapiens GN=EIF6 PE=1 SV=1[more]
IF6_RAT1.9e-9872.43Eukaryotic translation initiation factor 6 OS=Rattus norvegicus GN=Eif6 PE=1 SV=... [more]
IF6_MOUSE1.9e-9872.43Eukaryotic translation initiation factor 6 OS=Mus musculus GN=Eif6 PE=1 SV=2[more]
BLAST of Csa2G336670 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJY3_CUCSA2.1e-133100.00Eukaryotic translation initiation factor 6 OS=Cucumis sativus GN=EIF6 PE=3 SV=1[more]
A0A067FVY8_CITSI4.4e-12391.43Eukaryotic translation initiation factor 6 OS=Citrus sinensis GN=EIF6 PE=3 SV=1[more]
V4SN16_9ROSI5.8e-12391.43Eukaryotic translation initiation factor 6 OS=Citrus clementina GN=EIF6 PE=3 SV=... [more]
A0A067K2E7_JATCU2.9e-12290.61Eukaryotic translation initiation factor 6 OS=Jatropha curcas GN=EIF6 PE=3 SV=1[more]
A0A0A0M1J5_CUCSA3.8e-12291.84Eukaryotic translation initiation factor 6 OS=Cucumis sativus GN=EIF6 PE=3 SV=1[more]
BLAST of Csa2G336670 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G55620.18.3e-12185.31 Translation initiation factor IF6[more]
AT2G39820.11.2e-9266.40 Translation initiation factor IF6[more]
BLAST of Csa2G336670 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659099525|ref|XP_008450645.1|9.8e-12493.06PREDICTED: eukaryotic translation initiation factor 6-2 [Cucumis melo][more]
gi|568825493|ref|XP_006467112.1|2.2e-12391.84PREDICTED: eukaryotic translation initiation factor 6-2 [Citrus sinensis][more]
gi|641852694|gb|KDO71559.1|6.4e-12391.43hypothetical protein CISIN_1g0259812mg [Citrus sinensis][more]
gi|567865247|ref|XP_006425246.1|8.3e-12391.43hypothetical protein CICLE_v10026354mg [Citrus clementina][more]
gi|802731925|ref|XP_012086279.1|4.1e-12290.61PREDICTED: eukaryotic translation initiation factor 6-2 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002769eIF6
Vocabulary: Biological Process
TermDefinition
GO:0042256mature ribosome assembly
Vocabulary: Molecular Function
TermDefinition
GO:0043022ribosome binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0042256 mature ribosome assembly
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0042273 ribosomal large subunit biogenesis
biological_process GO:0006413 translational initiation
cellular_component GO:0005829 cytosol
cellular_component GO:0005730 nucleolus
cellular_component GO:0005840 ribosome
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005575 cellular_component
molecular_function GO:0043023 ribosomal large subunit binding
molecular_function GO:0043022 ribosome binding
molecular_function GO:0003743 translation initiation factor activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU093927cucumber EST collection version 3.0transcribed_cluster
CU094349cucumber EST collection version 3.0transcribed_cluster
CU102328cucumber EST collection version 3.0transcribed_cluster
CU158548cucumber EST collection version 3.0transcribed_cluster
CU174125cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G336670.1Csa2G336670.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU174125CU174125transcribed_cluster
CU102328CU102328transcribed_cluster
CU158548CU158548transcribed_cluster
CU094349CU094349transcribed_cluster
CU093927CU093927transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002769Translation initiation factor IF6HAMAPMF_00032eIF_6coord: 1..245
score: 135
IPR002769Translation initiation factor IF6PIRPIRSF006413Transl_init_IF-6coord: 1..226
score: 6.8
IPR002769Translation initiation factor IF6PANTHERPTHR10784EUKARYOTIC TRANSLATION INITIATION FACTOR 6coord: 2..245
score: 5.7E
IPR002769Translation initiation factor IF6PFAMPF01912eIF-6coord: 4..203
score: 1.8
IPR002769Translation initiation factor IF6SMARTSM00654eIF6neu2coord: 3..204
score: 8.9E
IPR002769Translation initiation factor IF6TIGRFAMsTIGR00323TIGR00323coord: 4..224
score: 7.0
NoneNo IPR availableGENE3DG3DSA:3.75.10.10coord: 1..224
score: 1.2E
NoneNo IPR availableunknownSSF55909Penteincoord: 1..224
score: 5.98