Csa2G287180 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G287180
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 13737055 .. 13737430 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTTATCCTAACAACCAAGGTATGTATGTATATTTTCAAATCTATAGTTTTGAAAAAATTAGTGTCTGATCAACAAGTTGTGCTTGGTATTATTGTTTTTGTAGGAAGGAGAATGCATAATTGGAGGTACTGAAGAAGGAGATGAAATTAAATGTGGAATTAGTCTTTACCCAATGGAATTTTACAAAGCTTTCACATCAAAAGGAGTTTGGTTGTTATTCAATTCATATGATCCCAATGGCATGCTTTTGATTGCTCCTATGGGATTGTATACTCACATTTCTTCATTTTCTCCTCATGATATCTATGGAGGAATTGACCTCCATATTGTTAATATATCATCACTACATTTTTCTTTTCCACATCAATAA

mRNA sequence

ATGGAAGTTATCCTAACAACCAAGGAAGGAGAATGCATAATTGGAGGTACTGAAGAAGGAGATGAAATTAAATGTGGAATTAGTCTTTACCCAATGGAATTTTACAAAGCTTTCACATCAAAAGGAGTTTGGTTGTTATTCAATTCATATGATCCCAATGGCATGCTTTTGATTGCTCCTATGGGATTGTATACTCACATTTCTTCATTTTCTCCTCATGATATCTATGGAGGAATTGACCTCCATATTGTTAATATATCATCACTACATTTTTCTTTTCCACATCAATAA

Coding sequence (CDS)

ATGGAAGTTATCCTAACAACCAAGGAAGGAGAATGCATAATTGGAGGTACTGAAGAAGGAGATGAAATTAAATGTGGAATTAGTCTTTACCCAATGGAATTTTACAAAGCTTTCACATCAAAAGGAGTTTGGTTGTTATTCAATTCATATGATCCCAATGGCATGCTTTTGATTGCTCCTATGGGATTGTATACTCACATTTCTTCATTTTCTCCTCATGATATCTATGGAGGAATTGACCTCCATATTGTTAATATATCATCACTACATTTTTCTTTTCCACATCAATAA

Protein sequence

MEVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAPMGLYTHISSFSPHDIYGGIDLHIVNISSLHFSFPHQ*
Homology
[Close]
BLAST of Csa2G287180 vs. TrEMBL
Match: A0A0A0LQ10_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287180 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 7.5e-50
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 1 

Query: 1  MEVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAP 60
          MEVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAP
Sbjct: 1  MEVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAP 60

Query: 61 MGLYTHISSFSPHDIYGGIDLHIVNISSLHFSFPHQ 97
          MGLYTHISSFSPHDIYGGIDLHIVNISSLHFSFPHQ
Sbjct: 61 MGLYTHISSFSPHDIYGGIDLHIVNISSLHFSFPHQ 96

[Close]
BLAST of Csa2G287180 vs. TrEMBL
Match: A0A0A0LJU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287150 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.9e-24
Identity = 58/77 (75.32%), Postives = 64/77 (83.12%), Query Frame = 1 

Query: 2   EVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAPM 61
           E   TT+EG+CIIGG EEG+EIKCGISLYPMEFYKAFTSK VW  F+S D NG+LLIAPM
Sbjct: 59  ETSFTTQEGKCIIGGIEEGEEIKCGISLYPMEFYKAFTSKRVW-FFSSCDTNGLLLIAPM 118

Query: 62  GLYTHISSFSPHDIYGG 79
           G+YTHISSF P DI  G
Sbjct: 119 GVYTHISSFFPQDIPNG 134

[Close]
BLAST of Csa2G287180 vs. TrEMBL
Match: A0A0A0LMQ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287140 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.1e-23
Identity = 56/74 (75.68%), Postives = 59/74 (79.73%), Query Frame = 1 

Query: 2   EVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAPM 61
           E   T KEGECIIGG EEGDEI CGIS YPMEFYK FTSK VW  F+S D NG+LLIAPM
Sbjct: 58  ETSFTAKEGECIIGGIEEGDEINCGISFYPMEFYKGFTSKRVW-FFSSCDTNGLLLIAPM 117

Query: 62  GLYTHISSFSPHDI 76
           G+YTHISSF P DI
Sbjct: 118 GVYTHISSFFPQDI 130

[Close]
BLAST of Csa2G287180 vs. NCBI nr
Match: gi|700206917|gb|KGN62036.1| (hypothetical protein Csa_2G287180 [Cucumis sativus])

HSP 1 Score: 204.1 bits (518), Expect = 1.1e-49
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 1 

Query: 1  MEVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAP 60
          MEVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAP
Sbjct: 1  MEVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAP 60

Query: 61 MGLYTHISSFSPHDIYGGIDLHIVNISSLHFSFPHQ 97
          MGLYTHISSFSPHDIYGGIDLHIVNISSLHFSFPHQ
Sbjct: 61 MGLYTHISSFSPHDIYGGIDLHIVNISSLHFSFPHQ 96

[Close]
BLAST of Csa2G287180 vs. NCBI nr
Match: gi|700206914|gb|KGN62033.1| (hypothetical protein Csa_2G287150 [Cucumis sativus])

HSP 1 Score: 119.8 bits (299), Expect = 2.7e-24
Identity = 58/77 (75.32%), Postives = 64/77 (83.12%), Query Frame = 1 

Query: 2   EVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAPM 61
           E   TT+EG+CIIGG EEG+EIKCGISLYPMEFYKAFTSK VW  F+S D NG+LLIAPM
Sbjct: 59  ETSFTTQEGKCIIGGIEEGEEIKCGISLYPMEFYKAFTSKRVW-FFSSCDTNGLLLIAPM 118

Query: 62  GLYTHISSFSPHDIYGG 79
           G+YTHISSF P DI  G
Sbjct: 119 GVYTHISSFFPQDIPNG 134

[Close]
BLAST of Csa2G287180 vs. NCBI nr
Match: gi|659116192|ref|XP_008457954.1| (PREDICTED: uncharacterized protein LOC103497518 [Cucumis melo])

HSP 1 Score: 117.9 bits (294), Expect = 1.0e-23
Identity = 57/74 (77.03%), Postives = 62/74 (83.78%), Query Frame = 1 

Query: 2   EVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAPM 61
           E   TTKEGECIIGG EEG EIKCGISLYPM+FYKAFTSK VW  F+S D NG+LLIAPM
Sbjct: 59  ETSFTTKEGECIIGGIEEGQEIKCGISLYPMKFYKAFTSKRVW-FFSSCDTNGLLLIAPM 118

Query: 62  GLYTHISSFSPHDI 76
           G+YTHISSF P +I
Sbjct: 119 GVYTHISSFFPQEI 131

[Close]
BLAST of Csa2G287180 vs. NCBI nr
Match: gi|700206913|gb|KGN62032.1| (hypothetical protein Csa_2G287140 [Cucumis sativus])

HSP 1 Score: 116.3 bits (290), Expect = 3.0e-23
Identity = 56/74 (75.68%), Postives = 59/74 (79.73%), Query Frame = 1 

Query: 2   EVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAPM 61
           E   T KEGECIIGG EEGDEI CGIS YPMEFYK FTSK VW  F+S D NG+LLIAPM
Sbjct: 58  ETSFTAKEGECIIGGIEEGDEINCGISFYPMEFYKGFTSKRVW-FFSSCDTNGLLLIAPM 117

Query: 62  GLYTHISSFSPHDI 76
           G+YTHISSF P DI
Sbjct: 118 GVYTHISSFFPQDI 130

[Close]
BLAST of Csa2G287180 vs. NCBI nr
Match: gi|659116009|ref|XP_008457852.1| (PREDICTED: uncharacterized protein LOC103497437 [Cucumis melo])

HSP 1 Score: 74.7 bits (182), Expect = 9.9e-11
Identity = 37/71 (52.11%), Postives = 48/71 (67.61%), Query Frame = 1 

Query: 2   EVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAPM 61
           E+I T +   CIIGG  EG+E +  + L P+E Y  FTSK +W LF SYDP G+ L+AP 
Sbjct: 77  EIIFTNERDGCIIGGIREGEEWRGAMCLNPIEGYFNFTSKRLW-LFESYDPIGVTLVAPF 136

Query: 62  GLYTHISSFSP 73
           GLY +IS+F P
Sbjct: 137 GLYVNISTFFP 146

The following BLAST results are available for this feature:
BLAST of Csa2G287180 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQ10_CUCSA7.5e-50100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287180 PE=4 SV=1[more]
A0A0A0LJU4_CUCSA1.9e-2475.32Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287150 PE=4 SV=1[more]
A0A0A0LMQ7_CUCSA2.1e-2375.68Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287140 PE=4 SV=1[more]
BLAST of Csa2G287180 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206917|gb|KGN62036.1|1.1e-49100.00hypothetical protein Csa_2G287180 [Cucumis sativus][more]
gi|700206914|gb|KGN62033.1|2.7e-2475.32hypothetical protein Csa_2G287150 [Cucumis sativus][more]
gi|659116192|ref|XP_008457954.1|1.0e-2377.03PREDICTED: uncharacterized protein LOC103497518 [Cucumis melo][more]
gi|700206913|gb|KGN62032.1|3.0e-2375.68hypothetical protein Csa_2G287140 [Cucumis sativus][more]
gi|659116009|ref|XP_008457852.1|9.9e-1152.11PREDICTED: uncharacterized protein LOC103497437 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G287180.1Csa2G287180.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G287180Cucumber (Gy14) v1cgycuB513
Csa2G287180Cucurbita maxima (Rimu)cmacuB543
Csa2G287180Cucurbita maxima (Rimu)cmacuB582
Csa2G287180Cucurbita moschata (Rifu)cmocuB532
Csa2G287180Cucurbita moschata (Rifu)cmocuB571
Csa2G287180Melon (DHL92) v3.5.1cumeB099
Csa2G287180Watermelon (Charleston Gray)cuwcgB119
Csa2G287180Watermelon (97103) v1cuwmB140
Csa2G287180Cucurbita pepo (Zucchini)cpecuB268
Csa2G287180Cucurbita pepo (Zucchini)cpecuB710
Csa2G287180Bottle gourd (USVL1VR-Ls)culsiB093
Csa2G287180Cucumber (Gy14) v2cgybcuB056
Csa2G287180Melon (DHL92) v3.6.1cumedB090
Csa2G287180Silver-seed gourdcarcuB1006
Csa2G287180Silver-seed gourdcarcuB1070
Csa2G287180Watermelon (97103) v2cuwmbB115
Csa2G287180Wax gourdcuwgoB175