Csa2G287100 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G287100
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 13685448 .. 13685934 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGGAGCTAAAATGGAAGAAACCGATCAATCTGTAGCTCAGCACAGAGGTTATGGAAAGGCTGCAACAGACCCACAAAGAAAAAACGGTCATAGAAAAGGAAGCTTTTCTAGTAACAAGCTTCCATTGAAAAAGGGACCCATCAGCTCAGAGAAAAGGTAGAGATTCTGAAATGGGTGTTTTTAGAAAAATTTGGTGAGAAATGGACAGGTCGTTGGGGTTTGAATGAAGAGAAGAAAATAAAAGTCCAAATCGTCAACTGGGTAAGCGATTGAGAAGTGGGAAAGTGGCCAAATTAGAGATTTCAAAGGGGAAACATGAGTAGAATGGTTAAAAGAGTGTGTTGTTATTATATAAGGAGAGTCGCCGGCCAAGTTCTCTGGTTTTCAGGCAACCGGTAATGGGTTCTGCATTATCTCTACATAAATGGTCGATTTCTCAAGGAAAAACGAAGGAGATGATTCAATTTAACAAACTTCTATGA

mRNA sequence

ATGAAGGGAGCTAAAATGGAAGAAACCGATCAATCTGTAGCTCAGCACAGAGGTTATGGAAAGGCTGCAACAGACCCACAAAGAAAAAACGAAAAATTTGGTGAGAAATGGACAGGTCGTTGGGGTTTGAATGAAGAGAAGAAAATAAAAGTCCAAATCGTCAACTGGGAGAGTCGCCGGCCAAGTTCTCTGGTTTTCAGGCAACCGGTAATGGGTTCTGCATTATCTCTACATAAATGGTCGATTTCTCAAGGAAAAACGAAGGAGATGATTCAATTTAACAAACTTCTATGA

Coding sequence (CDS)

ATGAAGGGAGCTAAAATGGAAGAAACCGATCAATCTGTAGCTCAGCACAGAGGTTATGGAAAGGCTGCAACAGACCCACAAAGAAAAAACGAAAAATTTGGTGAGAAATGGACAGGTCGTTGGGGTTTGAATGAAGAGAAGAAAATAAAAGTCCAAATCGTCAACTGGGAGAGTCGCCGGCCAAGTTCTCTGGTTTTCAGGCAACCGGTAATGGGTTCTGCATTATCTCTACATAAATGGTCGATTTCTCAAGGAAAAACGAAGGAGATGATTCAATTTAACAAACTTCTATGA

Protein sequence

MKGAKMEETDQSVAQHRGYGKAATDPQRKNEKFGEKWTGRWGLNEEKKIKVQIVNWESRRPSSLVFRQPVMGSALSLHKWSISQGKTKEMIQFNKLL*
Homology
[Close]
BLAST of Csa2G287100 vs. TrEMBL
Match: A0A0A0LJU1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287100 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 3.8e-49
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1 

Query: 1  MKGAKMEETDQSVAQHRGYGKAATDPQRKNEKFGEKWTGRWGLNEEKKIKVQIVNWESRR 60
          MKGAKMEETDQSVAQHRGYGKAATDPQRKNEKFGEKWTGRWGLNEEKKIKVQIVNWESRR
Sbjct: 1  MKGAKMEETDQSVAQHRGYGKAATDPQRKNEKFGEKWTGRWGLNEEKKIKVQIVNWESRR 60

Query: 61 PSSLVFRQPVMGSALSLHKWSISQGKTKEMIQFNKLL 98
          PSSLVFRQPVMGSALSLHKWSISQGKTKEMIQFNKLL
Sbjct: 61 PSSLVFRQPVMGSALSLHKWSISQGKTKEMIQFNKLL 97

[Close]
BLAST of Csa2G287100 vs. NCBI nr
Match: gi|700206909|gb|KGN62028.1| (hypothetical protein Csa_2G287100 [Cucumis sativus])

HSP 1 Score: 201.8 bits (512), Expect = 5.4e-49
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1 

Query: 1  MKGAKMEETDQSVAQHRGYGKAATDPQRKNEKFGEKWTGRWGLNEEKKIKVQIVNWESRR 60
          MKGAKMEETDQSVAQHRGYGKAATDPQRKNEKFGEKWTGRWGLNEEKKIKVQIVNWESRR
Sbjct: 1  MKGAKMEETDQSVAQHRGYGKAATDPQRKNEKFGEKWTGRWGLNEEKKIKVQIVNWESRR 60

Query: 61 PSSLVFRQPVMGSALSLHKWSISQGKTKEMIQFNKLL 98
          PSSLVFRQPVMGSALSLHKWSISQGKTKEMIQFNKLL
Sbjct: 61 PSSLVFRQPVMGSALSLHKWSISQGKTKEMIQFNKLL 97

The following BLAST results are available for this feature:
BLAST of Csa2G287100 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJU1_CUCSA3.8e-49100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287100 PE=4 SV=1[more]
BLAST of Csa2G287100 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206909|gb|KGN62028.1|5.4e-49100.00hypothetical protein Csa_2G287100 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU115882cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G287100.1Csa2G287100.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU115882CU115882transcribed_cluster