Csa2G258820 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa2G258820
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Auxin-induced SAUR-like protein; contains IPR003676 (Auxin responsive SAUR protein)
Location	Chr2 : 12596633 .. 12597149 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCAACGAGTACTCTATTTTCTAAATCAAGTTCCATATCAAGCAAGACACCGCTCAAACTCAATCACTTTTCTCTTGTTTCGAGTAAATTTTCGATATGGGAATTCGTCTACAATCGATTCTTCTCAACGCCAAGCAGATTTTGAAAATGCAAGCTATGTCAGCCAGAAATCAATCTGATGTTCCCAAAGGCCATATTGCAGTTTACGTGGGAGAGATTCAAAGGAAGAGATTTGTCGTCCCTATATCATACTTGAAGAATCCTTCTTTTGTAGATCTGCTCAATAGATCAGAAGAAGAATTTGGATTTTGCCACCCAATGGGCGGCTTGACGATTCCATGCCGAGAGGATGCTTTCATAAATCTCACTGCCAGGCTGCACACGTCATGAAAGAGAACAAAAAAGAAAAGAAATGTTCTTGATCACAGTTTTGTCGCCTATAATTTTAGGAAGTAGTAGGATAATACTGTACAGTAACTTCGTTGTTTGAGCAATTGAAATTACATTCTTCTCATA

mRNA sequence

ATGGGAATTCGTCTACAATCGATTCTTCTCAACGCCAAGCAGATTTTGAAAATGCAAGCTATGTCAGCCAGAAATCAATCTGATGTTCCCAAAGGCCATATTGCAGTTTACGTGGGAGAGATTCAAAGGAAGAGATTTGTCGTCCCTATATCATACTTGAAGAATCCTTCTTTTGTAGATCTGCTCAATAGATCAGAAGAAGAATTTGGATTTTGCCACCCAATGGGCGGCTTGACGATTCCATGCCGAGAGGATGCTTTCATAAATCTCACTGCCAGGCTGCACACGTCATGA

Coding sequence (CDS)

ATGGGAATTCGTCTACAATCGATTCTTCTCAACGCCAAGCAGATTTTGAAAATGCAAGCTATGTCAGCCAGAAATCAATCTGATGTTCCCAAAGGCCATATTGCAGTTTACGTGGGAGAGATTCAAAGGAAGAGATTTGTCGTCCCTATATCATACTTGAAGAATCCTTCTTTTGTAGATCTGCTCAATAGATCAGAAGAAGAATTTGGATTTTGCCACCCAATGGGCGGCTTGACGATTCCATGCCGAGAGGATGCTTTCATAAATCTCACTGCCAGGCTGCACACGTCATGA

Protein sequence

MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS*

Homology

[Close]

BLAST of Csa2G258820 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 7.8e-24
Identity = 56/87 (64.37%), Postives = 65/87 (74.71%), Query Frame = 1


Query: 9  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVDLLNRSEEE 68
          LL AK+IL   A +    S  PKG +AVYVGE Q+KR++VP+SYL  PSF  LL++SEEE
Sbjct: 7  LLVAKKILSRSAAAV---SAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLTIPCREDAFINLTARLH 96
          FGF HPMGGLTIPC ED FIN+T+RLH
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of Csa2G258820 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-23
Identity = 54/86 (62.79%), Postives = 63/86 (73.26%), Query Frame = 1


Query: 9  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVDLLNRSEEE 68
          LL AK+IL     +    S  PKG +AVYVGE Q+KR++VP+SYL  PSF  LL++SEEE
Sbjct: 7  LLGAKKILSRSTAAG---SAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLTIPCREDAFINLTARL 95
          FGF HPMGGLTIPC ED FIN+T+RL
Sbjct: 67 FGFAHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Csa2G258820 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-23
Identity = 55/86 (63.95%), Postives = 63/86 (73.26%), Query Frame = 1


Query: 9  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVDLLNRSEEE 68
          LL AK+IL     SA      PKG +AVYVGE Q+KR++VP+SYL  PSF  LL++SEEE
Sbjct: 7  LLGAKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLTIPCREDAFINLTARL 95
          FGF HPMGGLTIPC ED FIN+T+RL
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of Csa2G258820 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-23
Identity = 55/85 (64.71%), Postives = 63/85 (74.12%), Query Frame = 1


Query: 9  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVDLLNRSEEE 68
          LL AK+IL     +A   S  PKG +AVYVGE Q+KR++VPISYL  PSF  LL++SEEE
Sbjct: 7  LLGAKKILSRSTTAA---SAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLTIPCREDAFINLTAR 94
          FGF HPMGGLTIPC ED FIN+T+R
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSR 88

[Close]

BLAST of Csa2G258820 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 5.1e-23
Identity = 55/86 (63.95%), Postives = 64/86 (74.42%), Query Frame = 1


Query: 9  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVDLLNRSEEE 68
          LL AK+IL   + S    S  PKG +AVYVGE Q+KR++VP+SYL  PSF  LL++SEEE
Sbjct: 7  LLGAKKIL---SRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLTIPCREDAFINLTARL 95
          FGF HPMGGLTIPC ED FIN+T+RL
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Csa2G258820 vs. TrEMBL
Match: A0A0A0LPJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258820 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.6e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60
          MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD
Sbjct: 1  MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 98
          LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Csa2G258820 vs. TrEMBL
Match: A0A0A0LM74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258830 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 3.9e-46
Identity = 95/97 (97.94%), Postives = 95/97 (97.94%), Query Frame = 1


Query: 1  MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60
          MGIRL SILLNAKQILKMQAMSARNQ DVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD
Sbjct: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 98
          LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Csa2G258820 vs. TrEMBL
Match: A0A0A0LJ03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258810 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.6e-39
Identity = 82/90 (91.11%), Postives = 86/90 (95.56%), Query Frame = 1


Query: 8   ILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVDLLNRSEE 67
           +L  +  +LKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLK+PSFVDLLNRSEE
Sbjct: 116 VLKGSYLVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEE 175

Query: 68  EFGFCHPMGGLTIPCREDAFINLTARLHTS 98
           EFGFCHPMGGLTIPCREDAFINLTARLHTS
Sbjct: 176 EFGFCHPMGGLTIPCREDAFINLTARLHTS 205

[Close]

BLAST of Csa2G258820 vs. TrEMBL
Match: A0A0A0LPH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 6.9e-35
Identity = 71/97 (73.20%), Postives = 88/97 (90.72%), Query Frame = 1


Query: 1  MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60
          MGIR+ S+LLNAKQI +MQ++S R  S++PKGHIAVYVGEI+RKRFVVP+SYL +P+F+ 
Sbjct: 1  MGIRMPSLLLNAKQIFRMQSVSTRCHSNIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLS 60

Query: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 98
          LLNR+EEEFGF HP GGLTIPC+EDAFI+LT++LHTS
Sbjct: 61 LLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSKLHTS 97

[Close]

BLAST of Csa2G258820 vs. TrEMBL
Match: A0A0A0LPG7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258620 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.0e-34
Identity = 73/97 (75.26%), Postives = 87/97 (89.69%), Query Frame = 1


Query: 1  MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60
          MGIRL SILL+ KQILK+Q +S + +SD+PKGHIAVYVGEIQ KRFVVPIS+L +PSF++
Sbjct: 1  MGIRLPSILLHTKQILKIQGVSTKVKSDIPKGHIAVYVGEIQTKRFVVPISFLNHPSFLN 60

Query: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 98
          LL R+EEEFGF HPMGGLTIPCRE+ FI+LT+RLHTS
Sbjct: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRLHTS 97

[Close]

BLAST of Csa2G258820 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.2 bits (287), Expect = 2.3e-26
Identity = 56/99 (56.57%), Postives = 72/99 (72.73%), Query Frame = 1


Query: 1  MGIRLQSILLNAKQILK----MQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNP 60
          M IR+  +L ++KQIL+    + + S+ +  DVPKG++AVYVGE   KRFVVP+SYL  P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLH 96
          SF DLL ++EEEFGF HPMGGLTIPC E+ FI+L +R +
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of Csa2G258820 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.4 bits (285), Expect = 4.0e-26
Identity = 56/98 (57.14%), Postives = 74/98 (75.51%), Query Frame = 1


Query: 1  MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEI-QRKRFVVPISYLKNPSFV 60
          M IR+  +L ++KQ+LK  + S+ N + +PKGH+AVYVGE+ Q++RFVVP++YL +P F 
Sbjct: 1  MAIRISRVLQSSKQLLKSLSHSSNNVA-IPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 DLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 98
           LL ++EEEFGF HPMGGLTIPC E  FI+L +RL TS
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of Csa2G258820 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.9 bits (276), Expect = 4.4e-25
Identity = 56/101 (55.45%), Postives = 74/101 (73.27%), Query Frame = 1


Query: 1   MGIRLQSILLNAKQILKMQAMSARNQSD------VPKGHIAVYVGE---IQRKRFVVPIS 60
           MG+   +I    KQILK+ +++ RN++       VPKGH+AVYVGE   +++KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLKNPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTA 93
           +L +PSF + L+R+EEEFGF HPMGGLTIPCRE+ F++L A
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIA 101

[Close]

BLAST of Csa2G258820 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.9 bits (276), Expect = 4.4e-25
Identity = 56/87 (64.37%), Postives = 65/87 (74.71%), Query Frame = 1


Query: 9  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVDLLNRSEEE 68
          LL AK+IL   A +    S  PKG +AVYVGE Q+KR++VP+SYL  PSF  LL++SEEE
Sbjct: 7  LLVAKKILSRSAAAV---SAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLTIPCREDAFINLTARLH 96
          FGF HPMGGLTIPC ED FIN+T+RLH
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of Csa2G258820 vs. TAIR10
Match: AT5G18010.1 (AT5G18010.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.4 bits (272), Expect = 1.3e-24
Identity = 54/86 (62.79%), Postives = 63/86 (73.26%), Query Frame = 1


Query: 9  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVDLLNRSEEE 68
          LL AK+IL     +    S  PKG +AVYVGE Q+KR++VP+SYL  PSF  LL++SEEE
Sbjct: 7  LLGAKKILSRSTAAG---SAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFCHPMGGLTIPCREDAFINLTARL 95
          FGF HPMGGLTIPC ED FIN+T+RL
Sbjct: 67 FGFAHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Csa2G258820 vs. NCBI nr
Match: gi|700206767|gb|KGN61886.1| (hypothetical protein Csa_2G258820 [Cucumis sativus])

HSP 1 Score: 196.4 bits (498), Expect = 2.3e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60
          MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD
Sbjct: 1  MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 98
          LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Csa2G258820 vs. NCBI nr
Match: gi|778669611|ref|XP_011649277.1| (PREDICTED: auxin-induced protein X15-like [Cucumis sativus])

HSP 1 Score: 191.8 bits (486), Expect = 5.6e-46
Identity = 95/97 (97.94%), Postives = 95/97 (97.94%), Query Frame = 1


Query: 1  MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60
          MGIRL SILLNAKQILKMQAMSARNQ DVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD
Sbjct: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 98
          LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Csa2G258820 vs. NCBI nr
Match: gi|778669614|ref|XP_011649278.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 191.8 bits (486), Expect = 5.6e-46
Identity = 94/97 (96.91%), Postives = 96/97 (98.97%), Query Frame = 1


Query: 1  MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60
          MGIRL SILLNAKQ+LKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLK+PSFVD
Sbjct: 1  MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 98
          LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Csa2G258820 vs. NCBI nr
Match: gi|659115604|ref|XP_008457639.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 187.2 bits (474), Expect = 1.4e-44
Identity = 92/97 (94.85%), Postives = 95/97 (97.94%), Query Frame = 1


Query: 1  MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60
          MGIRL SILLNAKQ+LKMQAMSARNQSDVPKG+IAVYVGEIQRKRFVVPISYLK+PSFVD
Sbjct: 1  MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 98
          LL RSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
Sbjct: 61 LLKRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

[Close]

BLAST of Csa2G258820 vs. NCBI nr
Match: gi|700206766|gb|KGN61885.1| (hypothetical protein Csa_2G258810 [Cucumis sativus])

HSP 1 Score: 169.9 bits (429), Expect = 2.3e-39
Identity = 82/90 (91.11%), Postives = 86/90 (95.56%), Query Frame = 1


Query: 8   ILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVDLLNRSEE 67
           +L  +  +LKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLK+PSFVDLLNRSEE
Sbjct: 116 VLKGSYLVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEE 175

Query: 68  EFGFCHPMGGLTIPCREDAFINLTARLHTS 98
           EFGFCHPMGGLTIPCREDAFINLTARLHTS
Sbjct: 176 EFGFCHPMGGLTIPCREDAFINLTARLHTS 205

The following BLAST results are available for this feature:

BLAST of Csa2G258820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU23_ARATH	7.8e-24	64.37	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]
SAU19_ARATH	2.3e-23	62.79	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]
SAU21_ARATH	2.3e-23	63.95	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]
SAU20_ARATH	3.0e-23	64.71	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU24_ARATH	5.1e-23	63.95	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]

BLAST of Csa2G258820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPJ1_CUCSA	1.6e-47	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258820 PE=4 SV=1	[more]
A0A0A0LM74_CUCSA	3.9e-46	97.94	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258830 PE=4 SV=1	[more]
A0A0A0LJ03_CUCSA	1.6e-39	91.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258810 PE=4 SV=1	[more]
A0A0A0LPH3_CUCSA	6.9e-35	73.20	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1	[more]
A0A0A0LPG7_CUCSA	2.0e-34	75.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258620 PE=4 SV=1	[more]

BLAST of Csa2G258820 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38840.1	2.3e-26	56.57	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	4.0e-26	57.14	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	4.4e-25	55.45	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	4.4e-25	64.37	SAUR-like auxin-responsive protein family	[more]
AT5G18010.1	1.3e-24	62.79	SAUR-like auxin-responsive protein family	[more]

BLAST of Csa2G258820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700206767\|gb\|KGN61886.1\|	2.3e-47	100.00	hypothetical protein Csa_2G258820 [Cucumis sativus]	[more]
gi\|778669611\|ref\|XP_011649277.1\|	5.6e-46	97.94	PREDICTED: auxin-induced protein X15-like [Cucumis sativus]	[more]
gi\|778669614\|ref\|XP_011649278.1\|	5.6e-46	96.91	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115604\|ref\|XP_008457639.1\|	1.4e-44	94.85	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206766\|gb\|KGN61885.1\|	2.3e-39	91.11	hypothetical protein Csa_2G258810 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU091603	cucumber EST collection version 3.0	transcribed_cluster
CU112413	cucumber EST collection version 3.0	transcribed_cluster
CU141618	cucumber EST collection version 3.0	transcribed_cluster
CU168160	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa2G258820.1	Csa2G258820.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU141618	CU141618	transcribed_cluster
CU168160	CU168160	transcribed_cluster
CU112413	CU112413	transcribed_cluster
CU091603	CU091603	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 12..93 score: 5.7
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..97 score: 1.4
None	No IPR available	PANTHER	PTHR31929:SF3	SUBFAMILY NOT NAMED	coord: 2..97 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa2G258820	Cucumber (Gy14) v2	cgybcuB056
Csa2G258820	Cucumber (Gy14) v2	cgybcuB295
Csa2G258820	Melon (DHL92) v3.6.1	cumedB089
Csa2G258820	Silver-seed gourd	carcuB0341
Csa2G258820	Watermelon (97103) v2	cuwmbB110
Csa2G258820	Wax gourd	cuwgoB182
Csa2G258820	Cucumber (Chinese Long) v2	cucuB077
Csa2G258820	Cucumber (Gy14) v1	cgycuB257
Csa2G258820	Cucurbita maxima (Rimu)	cmacuB542
Csa2G258820	Cucurbita maxima (Rimu)	cmacuB588
Csa2G258820	Cucurbita moschata (Rifu)	cmocuB531
Csa2G258820	Cucurbita moschata (Rifu)	cmocuB577
Csa2G258820	Melon (DHL92) v3.5.1	cumeB098
Csa2G258820	Watermelon (Charleston Gray)	cuwcgB104
Csa2G258820	Watermelon (97103) v1	cuwmB155
Csa2G258820	Cucurbita pepo (Zucchini)	cpecuB060
Csa2G258820	Cucurbita pepo (Zucchini)	cpecuB267
Csa2G258820	Cucurbita pepo (Zucchini)	cpecuB540
Csa2G258820	Cucurbita pepo (Zucchini)	cpecuB704
Csa2G258820	Bottle gourd (USVL1VR-Ls)	culsiB093