Csa2G228400 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G228400
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 11085319 .. 11085706 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGATTCGGAATTTTTCGATGGGCCTGATCAGTGAACGAGTAAGTATTGGTTCAAAGTTACAATCGAAGATGGAGAATTTAGAGGTATATTGTCTAATTCTTTAGTTGATTAGTTCAAATAGAATAGCATTTAATGCAAACTAAGTTTCTTGATAAATCACATTGTGGTTTGACTCTATTTTCATGATCAAATGTAGAACCACATATTGAAGATTTTGATGCATTTATCAACTGGTATAGCATTGCTTATTGAAAACAATATAATTGAATTGTTCTACGTGTTCATGTACAGGCAAGTTCCTTGCTTCTACTTTATAATTGGAAATATATGTTCGTACGGCCATACTTGTTCCTGATCCACAAATCCGGGTCAGTTTCTTGGTAA

mRNA sequence

ATGGTGATTCGGAATTTTTCGATGGGCCTGATCAGTGAACGAGTAAGTATTGGTTCAAAGTTACAATCGAAGATGGAGAATTTAGAGGCAAGTTCCTTGCTTCTACTTTATAATTGGAAATATATGTTCGTACGGCCATACTTGTTCCTGATCCACAAATCCGGGTCAGTTTCTTGGTAA

Coding sequence (CDS)

ATGGTGATTCGGAATTTTTCGATGGGCCTGATCAGTGAACGAGTAAGTATTGGTTCAAAGTTACAATCGAAGATGGAGAATTTAGAGGCAAGTTCCTTGCTTCTACTTTATAATTGGAAATATATGTTCGTACGGCCATACTTGTTCCTGATCCACAAATCCGGGTCAGTTTCTTGGTAA

Protein sequence

MVIRNFSMGLISERVSIGSKLQSKMENLEASSLLLLYNWKYMFVRPYLFLIHKSGSVSW*
Homology
[Close]
BLAST of Csa2G228400 vs. TrEMBL
Match: A0A0A0LKW5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G228400 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.2e-24
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1 

Query: 1  MVIRNFSMGLISERVSIGSKLQSKMENLEASSLLLLYNWKYMFVRPYLFLIHKSGSVSW 60
          MVIRNFSMGLISERVSIGSKLQSKMENLEASSLLLLYNWKYMFVRPYLFLIHKSGSVSW
Sbjct: 1  MVIRNFSMGLISERVSIGSKLQSKMENLEASSLLLLYNWKYMFVRPYLFLIHKSGSVSW 59

[Close]
BLAST of Csa2G228400 vs. NCBI nr
Match: gi|700206585|gb|KGN61704.1| (hypothetical protein Csa_2G228400 [Cucumis sativus])

HSP 1 Score: 119.8 bits (299), Expect = 1.7e-24
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1 

Query: 1  MVIRNFSMGLISERVSIGSKLQSKMENLEASSLLLLYNWKYMFVRPYLFLIHKSGSVSW 60
          MVIRNFSMGLISERVSIGSKLQSKMENLEASSLLLLYNWKYMFVRPYLFLIHKSGSVSW
Sbjct: 1  MVIRNFSMGLISERVSIGSKLQSKMENLEASSLLLLYNWKYMFVRPYLFLIHKSGSVSW 59

The following BLAST results are available for this feature:
BLAST of Csa2G228400 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKW5_CUCSA1.2e-24100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G228400 PE=4 SV=1[more]
BLAST of Csa2G228400 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206585|gb|KGN61704.1|1.7e-24100.00hypothetical protein Csa_2G228400 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU145820cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G228400.1Csa2G228400.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU145820CU145820transcribed_cluster