Csa2G213950 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G213950
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 10620156 .. 10620515 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCGTCGCGAATCGTCTGCACCTCCGTGCTGTCCAGAACCTATCCGCCAGCCGCCAGCCGCCAGCCGTCTCTTTCTCTTCCTTTCCGTTCACCTGAAGCCTACGCCGATCACTCACGCCGACGTTCCTTCAGCGGCCTTCGTCATCGGTCACAGCTCGAGTCGCAGTCGATGTTTTTTTTCCTTTTTCTCTCTGTCGTCCGGTCAAAACCCAGTCGAAGGGACATGTTTCATGCCGCCGCGACGTCCGTCAACTGTTCCGCGCCGCTGCGATCCTTTGCCGCTCAACATCAGTGCGTCGTGACTGTTTTCCCATGCGTACTGCTTTTCCTAGCCGCAAATCACAAGTCGTTCTACC

mRNA sequence

ATGGCTCGTCGCGAATCGTCTGCACCTCCGTGCTGTCCAGAACCTATCCGCCAGCCGCCAGCCGCCAGCCGTCTCTTTCTCTTCCTTTCCGTTCACCTGAAGCCTACGCCGATCACTCACGCCGACGTTCCTTCAGCGGCCTTCGTCATCGGTCACAGCTCGAGTCGCAGTCGATGTTTTTTTTCCTTTTTCTCTCTGTCGTCCGGTCAAAACCCAGTCGAAGGGACATGTTTCATGCCGCCGCGACGTCCGTCAACTGTTCCGCGCCGCTGCGATCCTTTGCCGCTCAACATCAGTGCGTCGTGA

Coding sequence (CDS)

ATGGCTCGTCGCGAATCGTCTGCACCTCCGTGCTGTCCAGAACCTATCCGCCAGCCGCCAGCCGCCAGCCGTCTCTTTCTCTTCCTTTCCGTTCACCTGAAGCCTACGCCGATCACTCACGCCGACGTTCCTTCAGCGGCCTTCGTCATCGGTCACAGCTCGAGTCGCAGTCGATGTTTTTTTTCCTTTTTCTCTCTGTCGTCCGGTCAAAACCCAGTCGAAGGGACATGTTTCATGCCGCCGCGACGTCCGTCAACTGTTCCGCGCCGCTGCGATCCTTTGCCGCTCAACATCAGTGCGTCGTGA

Protein sequence

MARRESSAPPCCPEPIRQPPAASRLFLFLSVHLKPTPITHADVPSAAFVIGHSSSRSRCFFSFFSLSSGQNPVEGTCFMPPRRPSTVPRRCDPLPLNISAS*
Homology
[Close]
BLAST of Csa2G213950 vs. TrEMBL
Match: A0A0A0LIA9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G213950 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 1.7e-52
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 

Query: 1   MARRESSAPPCCPEPIRQPPAASRLFLFLSVHLKPTPITHADVPSAAFVIGHSSSRSRCF 60
           MARRESSAPPCCPEPIRQPPAASRLFLFLSVHLKPTPITHADVPSAAFVIGHSSSRSRCF
Sbjct: 1   MARRESSAPPCCPEPIRQPPAASRLFLFLSVHLKPTPITHADVPSAAFVIGHSSSRSRCF 60

Query: 61  FSFFSLSSGQNPVEGTCFMPPRRPSTVPRRCDPLPLNISAS 102
           FSFFSLSSGQNPVEGTCFMPPRRPSTVPRRCDPLPLNISAS
Sbjct: 61  FSFFSLSSGQNPVEGTCFMPPRRPSTVPRRCDPLPLNISAS 101

[Close]
BLAST of Csa2G213950 vs. NCBI nr
Match: gi|700206531|gb|KGN61650.1| (hypothetical protein Csa_2G213950 [Cucumis sativus])

HSP 1 Score: 213.0 bits (541), Expect = 2.4e-52
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 

Query: 1   MARRESSAPPCCPEPIRQPPAASRLFLFLSVHLKPTPITHADVPSAAFVIGHSSSRSRCF 60
           MARRESSAPPCCPEPIRQPPAASRLFLFLSVHLKPTPITHADVPSAAFVIGHSSSRSRCF
Sbjct: 1   MARRESSAPPCCPEPIRQPPAASRLFLFLSVHLKPTPITHADVPSAAFVIGHSSSRSRCF 60

Query: 61  FSFFSLSSGQNPVEGTCFMPPRRPSTVPRRCDPLPLNISAS 102
           FSFFSLSSGQNPVEGTCFMPPRRPSTVPRRCDPLPLNISAS
Sbjct: 61  FSFFSLSSGQNPVEGTCFMPPRRPSTVPRRCDPLPLNISAS 101

The following BLAST results are available for this feature:
BLAST of Csa2G213950 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIA9_CUCSA1.7e-52100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G213950 PE=4 SV=1[more]
BLAST of Csa2G213950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206531|gb|KGN61650.1|2.4e-52100.00hypothetical protein Csa_2G213950 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G213950.1Csa2G213950.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G213950Silver-seed gourdcarcuB0254
Csa2G213950Silver-seed gourdcarcuB0261
Csa2G213950Silver-seed gourdcarcuB0349
Csa2G213950Silver-seed gourdcarcuB0765
Csa2G213950Silver-seed gourdcarcuB0974
Csa2G213950Watermelon (97103) v2cuwmbB129
Csa2G213950Watermelon (97103) v2cuwmbB131
Csa2G213950Watermelon (97103) v2cuwmbB147
Csa2G213950Watermelon (97103) v2cuwmbB154
Csa2G213950Wax gourdcuwgoB127
Csa2G213950Wax gourdcuwgoB142
Csa2G213950Wax gourdcuwgoB149
Csa2G213950Wax gourdcuwgoB210
Csa2G213950Cucumber (Chinese Long) v2cucuB050
Csa2G213950Cucumber (Gy14) v1cgycuB362
Csa2G213950Cucumber (Gy14) v1cgycuB543
Csa2G213950Cucurbita maxima (Rimu)cmacuB238
Csa2G213950Cucurbita maxima (Rimu)cmacuB350
Csa2G213950Cucurbita maxima (Rimu)cmacuB813
Csa2G213950Cucurbita maxima (Rimu)cmacuB881
Csa2G213950Cucurbita moschata (Rifu)cmocuB225
Csa2G213950Cucurbita moschata (Rifu)cmocuB339
Csa2G213950Cucurbita moschata (Rifu)cmocuB805
Csa2G213950Cucurbita moschata (Rifu)cmocuB868
Csa2G213950Melon (DHL92) v3.5.1cumeB138
Csa2G213950Melon (DHL92) v3.5.1cumeB141
Csa2G213950Melon (DHL92) v3.5.1cumeB145
Csa2G213950Watermelon (Charleston Gray)cuwcgB136
Csa2G213950Watermelon (Charleston Gray)cuwcgB153
Csa2G213950Watermelon (Charleston Gray)cuwcgB160
Csa2G213950Watermelon (97103) v1cuwmB116
Csa2G213950Watermelon (97103) v1cuwmB122
Csa2G213950Watermelon (97103) v1cuwmB172
Csa2G213950Cucurbita pepo (Zucchini)cpecuB127
Csa2G213950Cucurbita pepo (Zucchini)cpecuB236
Csa2G213950Cucurbita pepo (Zucchini)cpecuB306
Csa2G213950Cucurbita pepo (Zucchini)cpecuB596
Csa2G213950Cucurbita pepo (Zucchini)cpecuB849
Csa2G213950Bottle gourd (USVL1VR-Ls)culsiB087
Csa2G213950Bottle gourd (USVL1VR-Ls)culsiB127
Csa2G213950Bottle gourd (USVL1VR-Ls)culsiB129
Csa2G213950Cucumber (Gy14) v2cgybcuB056
Csa2G213950Cucumber (Gy14) v2cgybcuB101
Csa2G213950Melon (DHL92) v3.6.1cumedB130
Csa2G213950Melon (DHL92) v3.6.1cumedB136
Csa2G213950Melon (DHL92) v3.6.1cumedB137