Csa2G193880 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G193880
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 10384242 .. 10384442 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTTAAATTTTCATCCATTCTTTAGGACAAAGGGAGAATCCAAGAAATCCAAGCTACAAAACAAGTACCGTAACTCATCTCACGCGACGGCCTCTCACGAGCAAATCCATCACGCGACCAAACCCATCTCTGAAATCTGTTCAAACGATTACGACGGCGATATTGGAATTACAACGATGATTTCTCATCTCAAATGA

mRNA sequence

ATGAATTTAAATTTTCATCCATTCTTTAGGACAAAGGGAGAATCCAAGAAATCCAAGCTACAAAACAAGTACCGTAACTCATCTCACGCGACGGCCTCTCACGAGCAAATCCATCACGCGACCAAACCCATCTCTGAAATCTGTTCAAACGATTACGACGGCGATATTGGAATTACAACGATGATTTCTCATCTCAAATGA

Coding sequence (CDS)

ATGAATTTAAATTTTCATCCATTCTTTAGGACAAAGGGAGAATCCAAGAAATCCAAGCTACAAAACAAGTACCGTAACTCATCTCACGCGACGGCCTCTCACGAGCAAATCCATCACGCGACCAAACCCATCTCTGAAATCTGTTCAAACGATTACGACGGCGATATTGGAATTACAACGATGATTTCTCATCTCAAATGA

Protein sequence

MNLNFHPFFRTKGESKKSKLQNKYRNSSHATASHEQIHHATKPISEICSNDYDGDIGITTMISHLK*
Homology
[Close]
BLAST of Csa2G193880 vs. TrEMBL
Match: A0A0A0LIA1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G193880 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 5.4e-31
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 1 

Query: 1  MNLNFHPFFRTKGESKKSKLQNKYRNSSHATASHEQIHHATKPISEICSNDYDGDIGITT 60
          MNLNFHPFFRTKGESKKSKLQNKYRNSSHATASHEQIHHATKPISEICSNDYDGDIGITT
Sbjct: 1  MNLNFHPFFRTKGESKKSKLQNKYRNSSHATASHEQIHHATKPISEICSNDYDGDIGITT 60

Query: 61 MISHLK 67
          MISHLK
Sbjct: 61 MISHLK 66

[Close]
BLAST of Csa2G193880 vs. NCBI nr
Match: gi|700206516|gb|KGN61635.1| (hypothetical protein Csa_2G193880 [Cucumis sativus])

HSP 1 Score: 141.0 bits (354), Expect = 7.7e-31
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 1 

Query: 1  MNLNFHPFFRTKGESKKSKLQNKYRNSSHATASHEQIHHATKPISEICSNDYDGDIGITT 60
          MNLNFHPFFRTKGESKKSKLQNKYRNSSHATASHEQIHHATKPISEICSNDYDGDIGITT
Sbjct: 1  MNLNFHPFFRTKGESKKSKLQNKYRNSSHATASHEQIHHATKPISEICSNDYDGDIGITT 60

Query: 61 MISHLK 67
          MISHLK
Sbjct: 61 MISHLK 66

The following BLAST results are available for this feature:
BLAST of Csa2G193880 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIA1_CUCSA5.4e-31100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G193880 PE=4 SV=1[more]
BLAST of Csa2G193880 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206516|gb|KGN61635.1|7.7e-31100.00hypothetical protein Csa_2G193880 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G193880.1Csa2G193880.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G193880Watermelon (97103) v2cuwmbB129
Csa2G193880Watermelon (97103) v2cuwmbB131
Csa2G193880Watermelon (97103) v2cuwmbB147
Csa2G193880Watermelon (97103) v2cuwmbB154
Csa2G193880Wax gourdcuwgoB127
Csa2G193880Cucumber (Chinese Long) v2cucuB050
Csa2G193880Cucumber (Gy14) v1cgycuB362
Csa2G193880Cucurbita maxima (Rimu)cmacuB238
Csa2G193880Cucurbita maxima (Rimu)cmacuB350
Csa2G193880Cucurbita maxima (Rimu)cmacuB508
Csa2G193880Cucurbita maxima (Rimu)cmacuB813
Csa2G193880Cucurbita maxima (Rimu)cmacuB881
Csa2G193880Cucurbita moschata (Rifu)cmocuB225
Csa2G193880Cucurbita moschata (Rifu)cmocuB339
Csa2G193880Cucurbita moschata (Rifu)cmocuB805
Csa2G193880Cucurbita moschata (Rifu)cmocuB868
Csa2G193880Melon (DHL92) v3.5.1cumeB089
Csa2G193880Melon (DHL92) v3.5.1cumeB145
Csa2G193880Watermelon (Charleston Gray)cuwcgB136
Csa2G193880Watermelon (Charleston Gray)cuwcgB153
Csa2G193880Watermelon (Charleston Gray)cuwcgB160
Csa2G193880Watermelon (97103) v1cuwmB116
Csa2G193880Watermelon (97103) v1cuwmB122
Csa2G193880Watermelon (97103) v1cuwmB172
Csa2G193880Cucurbita pepo (Zucchini)cpecuB127
Csa2G193880Cucurbita pepo (Zucchini)cpecuB237
Csa2G193880Cucurbita pepo (Zucchini)cpecuB306
Csa2G193880Cucurbita pepo (Zucchini)cpecuB596
Csa2G193880Cucurbita pepo (Zucchini)cpecuB849
Csa2G193880Bottle gourd (USVL1VR-Ls)culsiB087
Csa2G193880Bottle gourd (USVL1VR-Ls)culsiB127
Csa2G193880Bottle gourd (USVL1VR-Ls)culsiB129
Csa2G193880Cucumber (Gy14) v2cgybcuB056
Csa2G193880Cucumber (Gy14) v2cgybcuB101
Csa2G193880Melon (DHL92) v3.6.1cumedB134
Csa2G193880Melon (DHL92) v3.6.1cumedB137
Csa2G193880Silver-seed gourdcarcuB0254
Csa2G193880Silver-seed gourdcarcuB0261
Csa2G193880Silver-seed gourdcarcuB0349
Csa2G193880Silver-seed gourdcarcuB0766
Csa2G193880Silver-seed gourdcarcuB0974