Csa2G172490 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGTGGCTGTGATCGGAGCAGGTATCAAGGGTCTGGTTTGTAGTTATGTTCTAGCCAAAGCTGGAGTAGAGGTGGTGTTGTTTGAGAGGGAAGAGTACTTAGGCAGCCATCGTTATAGAACAATTACTTTTGATGGCTTTGATTTGGATCTCGCCATCATGGTCTTCAATCCAGTATTATCTCACATCTCATTTGTTTTATATTTTTATGTGTTTGGATATGGGCTTATGATTTTTCAATTTAAATTCCAATAATTGAATATATTTTTATAGGTAACACACCCAAATACAATGGCACTCTTGGAGGATTTAGAAGTTGAAATGGAAGAATCAAATATGTCATTCTCAATAAGTATAGATAAAGGAAGAGGCTATGAATGGGGCACTCGAAATTGTTTTGCAAGTCTTTTTGCACAAAAGAACAACATTCTTGACCTTTCCTTTTGGCAAATGATTCGAGAAATAACCAAATTTAACGACGATGTCACCGAGTACGTATTGTTAAAAAATAACACTATTTCATCCCTAAGATTTTCAATAATATATTTTTTGCTTTTTAAATATTTTAAACGGTTATAATTTTAATCTAAACTTCTATCAATATCAAGTCTATCGATTTGACAAGTTTATATATTTATAAATATTGACGTGGAAGTATTTTTTCTAATAATATATTATATGATAGGTTAAATTTATCAGTGACATACACACTATTTTAAATTATTGTGTTGGATTGATGAGATAACAAGTATACTTGTAATTAGTAATTAATGTTCATATCCAGCTGCCAATGTGTGGTTCCATTTGGTCGAACCCCATAG ATGAAAGTGGCTGTGATCGGAGCAGGTATCAAGGGTCTGGTTTGTAGTTATGTTCTAGCCAAAGCTGGAGTAGAGGTGGTGTTGTTTGAGAGGGAAGAGTACTTAGGCAGCCATCGTTATAGAACAATTACTTTTGATGGCTTTGATTTGGATCTCGCCATCATGGTCTTCAATCCAGTAACACACCCAAATACAATGGCACTCTTGGAGGATTTAGAAGTTGAAATGGAAGAATCAAATATGTCATTCTCAATAAGTATAGATAAAGGAAGAGGCTATGAATGGGGCACTCGAAATTGTTTTGCAAGTCTTTTTGCACAAAAGAACAACATTCTTGACCTTTCCTTTTGGCAAATGATTCGAGAAATAACCAAATTTAACGACGATGTCACCGACTGCCAATGTGTGGTTCCATTTGGTCGAACCCCATAG ATGAAAGTGGCTGTGATCGGAGCAGGTATCAAGGGTCTGGTTTGTAGTTATGTTCTAGCCAAAGCTGGAGTAGAGGTGGTGTTGTTTGAGAGGGAAGAGTACTTAGGCAGCCATCGTTATAGAACAATTACTTTTGATGGCTTTGATTTGGATCTCGCCATCATGGTCTTCAATCCAGTAACACACCCAAATACAATGGCACTCTTGGAGGATTTAGAAGTTGAAATGGAAGAATCAAATATGTCATTCTCAATAAGTATAGATAAAGGAAGAGGCTATGAATGGGGCACTCGAAATTGTTTTGCAAGTCTTTTTGCACAAAAGAACAACATTCTTGACCTTTCCTTTTGGCAAATGATTCGAGAAATAACCAAATTTAACGACGATGTCACCGACTGCCAATGTGTGGTTCCATTTGGTCGAACCCCATAG MKVAVIGAGIKGLVCSYVLAKAGVEVVLFEREEYLGSHRYRTITFDGFDLDLAIMVFNPVTHPNTMALLEDLEVEMEESNMSFSISIDKGRGYEWGTRNCFASLFAQKNNILDLSFWQMIREITKFNDDVTDCQCVVPFGRTP*
BLAST of Csa2G172490 vs. TrEMBL
Match: A0A0A0LKK7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G172490 PE=4 SV=1) HSP 1 Score: 293.9 bits (751), Expect = 1.1e-76 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 1
BLAST of Csa2G172490 vs. TrEMBL
Match: A0A0A0LNM4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G172460 PE=4 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 6.5e-66 Identity = 128/132 (96.97%), Postives = 130/132 (98.48%), Query Frame = 1
BLAST of Csa2G172490 vs. TrEMBL
Match: A0A0A0LIH1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G171940 PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 2.5e-41 Identity = 86/132 (65.15%), Postives = 107/132 (81.06%), Query Frame = 1
BLAST of Csa2G172490 vs. TrEMBL
Match: A0A0A0LKK5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G171950 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 4.2e-41 Identity = 87/130 (66.92%), Postives = 104/130 (80.00%), Query Frame = 1
BLAST of Csa2G172490 vs. TrEMBL
Match: M5Y877_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001275mg PE=4 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 3.6e-40 Identity = 86/129 (66.67%), Postives = 102/129 (79.07%), Query Frame = 1
BLAST of Csa2G172490 vs. TAIR10
Match: AT3G23530.1 (AT3G23530.1 Cyclopropane-fatty-acyl-phospholipid synthase) HSP 1 Score: 158.7 bits (400), Expect = 2.7e-39 Identity = 81/131 (61.83%), Postives = 98/131 (74.81%), Query Frame = 1
BLAST of Csa2G172490 vs. TAIR10
Match: AT3G23510.1 (AT3G23510.1 Cyclopropane-fatty-acyl-phospholipid synthase) HSP 1 Score: 157.1 bits (396), Expect = 7.9e-39 Identity = 80/131 (61.07%), Postives = 98/131 (74.81%), Query Frame = 1
BLAST of Csa2G172490 vs. NCBI nr
Match: gi|700206460|gb|KGN61579.1| (hypothetical protein Csa_2G172490 [Cucumis sativus]) HSP 1 Score: 293.9 bits (751), Expect = 1.5e-76 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 1
BLAST of Csa2G172490 vs. NCBI nr
Match: gi|778668696|ref|XP_011649140.1| (PREDICTED: uncharacterized protein LOC101213610 [Cucumis sativus]) HSP 1 Score: 266.5 bits (680), Expect = 2.6e-68 Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 1
BLAST of Csa2G172490 vs. NCBI nr
Match: gi|778668693|ref|XP_011649139.1| (PREDICTED: uncharacterized protein LOC105434591 [Cucumis sativus]) HSP 1 Score: 259.6 bits (662), Expect = 3.2e-66 Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 1
BLAST of Csa2G172490 vs. NCBI nr
Match: gi|700206457|gb|KGN61576.1| (hypothetical protein Csa_2G172460 [Cucumis sativus]) HSP 1 Score: 258.1 bits (658), Expect = 9.3e-66 Identity = 128/132 (96.97%), Postives = 130/132 (98.48%), Query Frame = 1
BLAST of Csa2G172490 vs. NCBI nr
Match: gi|659121469|ref|XP_008460675.1| (PREDICTED: uncharacterized protein LOC103499444 isoform X2 [Cucumis melo]) HSP 1 Score: 177.2 bits (448), Expect = 2.1e-41 Identity = 87/130 (66.92%), Postives = 105/130 (80.77%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |