Csa2G171910 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAGGTTAAAAAAAGATGAAAAATCATCGAGCTGTTTAACATTGAACGGATCAACGTGATCAAACTTGTTAGGGTCAACGTTCAGCCACCAAACTCCGTCTTCCCAATGGAAGAATTGGAGAACAATCGATGGAATCATAGACAAACAAGAATCTGAATGCTTCAACAAATTCAAAACCCCTTTCAATGGCGTCATTAGCAACGGATCTCTCCGCCTCCCTTTTCCTCATCCCCATTGGCCTTCGTCGCCTCCTCTGTTCTTCCTCCATCTACCTTAACAACCCATCTCTCTACCGATCAAAAACCTGGTATTTATCAGAACCCAAATGGAAAAATTTCGATTTATATTCCCTCATCCTCCTCCTCCCCATCGCCGCCTTCTCTGAAATTTTCCTTTTTCTCGCCTTTTCCGGAAACCCCACTTACAAATTCGCATTCTCCCAGCAATCACTGGCCATTTTCTTCTTCTGGGCACTCGCCATTCTCATCGTTTTGCGGGAAAATGTCGACCCTCTTCTTGTAAGTGAGAGTTTCATCTTCGTTTTCGCTGGAATCGCTTTTCTTGTTGAGTATTCTGTGATCGGTAAAGGGATTACTGGTCTTGGTGGCGCTTTTTATCACATTTCTGGAGGATTAACCATTCTCTGCGCTTGTTCCTGCTTTTATTTGTCTATGAAACCATCTGCATTTTTCGCTGAATTTCTACTTTCCTCTGGTTTAACGTTTAAGGGTACATGGCTGTTTCAAGTTGGGTTGTCTTTGTATACCAAGGCATTTGCTTTGAAGGGTTGTCGTGCAATGTTGGTCTTGCCTGCTACTGGAGATGGTTTTGTACATTGTGATCTTGAAGAAGATGGTCTACGGGGCATTGCTTTGATGAATCTCATTTTCATTGGCCATGCTTTTCTAGTTTTGATCTTGGGTTTAGGTTTGGTTTGCTTATTGTCAAGCAACAGGAAGTTTAGGTTCGGTGAGGCGAGTGGCCCGTTGTTGGCTGAGCTTGGACCAGGGACTATGCTGATTCGCTCGTCTCCTGAGATTGAAATGGACTGAAGCTGTATGGCTCCTCATTCCTTACTGTATCTTTATACCAAATATGTCACTATAGTGAAGGAAAAAAATGATTTGTTCATTCATATTTTGCTTTTGACGTACAGTAAATAATCATAAGTTTTTCGTTTTTCCCCTTGTTTTATTTTTGTAGCTTTGATCAATAGAGAACTAAAGTAGATTAGTTTACCTAGTAGTTCATTTTGTCCAAGAGCTTCTCTTCTTTTGATCTTTCAGCCTTTGGCCAAATTATATGCTTTCATGTGACAGAAGAAATGGAAAGAAGACACTGTTTATCTCTATCTCTAAAACTTGCAATTCATCTTCATTAGGCACAATAAGCAATATAAATATTGAATTTGGCTGTGTCTTGTGAGTGTGTCTGTATTCAGGATTATGTTTTTGACGGGCAATTTCGTATGAAGAAAGTTTTCATCTGGCTATCAGCGTGTAATGACGGCCTCTGATGTATAGCTGCTGCAATTGTTTGTGCCGTGATACTTTTGTTTCTATGCAAGGCCTCACGAACTCCTGTCAAAGAAAAGAAGCACAAGACCACATACAATACAATGATACAAGTAATTGGGGGAATATGTCTATTGAAGTCCTGCACAAAATACACCCAGAATGTCCTTGCATTCTATTAATAAGGCACGTTGTTGCT ATGGCGTCATTAGCAACGGATCTCTCCGCCTCCCTTTTCCTCATCCCCATTGGCCTTCGTCGCCTCCTCTGTTCTTCCTCCATCTACCTTAACAACCCATCTCTCTACCGATCAAAAACCTGGTATTTATCAGAACCCAAATGGAAAAATTTCGATTTATATTCCCTCATCCTCCTCCTCCCCATCGCCGCCTTCTCTGAAATTTTCCTTTTTCTCGCCTTTTCCGGAAACCCCACTTACAAATTCGCATTCTCCCAGCAATCACTGGCCATTTTCTTCTTCTGGGCACTCGCCATTCTCATCGTTTTGCGGGAAAATGTCGACCCTCTTCTTGTAAGTGAGAGTTTCATCTTCGTTTTCGCTGGAATCGCTTTTCTTGTTGAGTATTCTGTGATCGGTAAAGGGATTACTGGTCTTGGTGGCGCTTTTTATCACATTTCTGGAGGATTAACCATTCTCTGCGCTTGTTCCTGCTTTTATTTGTCTATGAAACCATCTGCATTTTTCGCTGAATTTCTACTTTCCTCTGGTTTAACGTTTAAGGGTACATGGCTGTTTCAAGTTGGGTTGTCTTTGTATACCAAGGCATTTGCTTTGAAGGGTTGTCGTGCAATGTTGGTCTTGCCTGCTACTGGAGATGGTTTTGTACATTGTGATCTTGAAGAAGATGGTCTACGGGGCATTGCTTTGATGAATCTCATTTTCATTGGCCATGCTTTTCTAGTTTTGATCTTGGGTTTAGGTTTGGTTTGCTTATTGTCAAGCAACAGGAAGTTTAGGTTCGGTGAGGCGAGTGGCCCGTTGTTGGCTGAGCTTGGACCAGGGACTATGCTGATTCGCTCGTCTCCTGAGATTGAAATGGACTGA ATGGCGTCATTAGCAACGGATCTCTCCGCCTCCCTTTTCCTCATCCCCATTGGCCTTCGTCGCCTCCTCTGTTCTTCCTCCATCTACCTTAACAACCCATCTCTCTACCGATCAAAAACCTGGTATTTATCAGAACCCAAATGGAAAAATTTCGATTTATATTCCCTCATCCTCCTCCTCCCCATCGCCGCCTTCTCTGAAATTTTCCTTTTTCTCGCCTTTTCCGGAAACCCCACTTACAAATTCGCATTCTCCCAGCAATCACTGGCCATTTTCTTCTTCTGGGCACTCGCCATTCTCATCGTTTTGCGGGAAAATGTCGACCCTCTTCTTGTAAGTGAGAGTTTCATCTTCGTTTTCGCTGGAATCGCTTTTCTTGTTGAGTATTCTGTGATCGGTAAAGGGATTACTGGTCTTGGTGGCGCTTTTTATCACATTTCTGGAGGATTAACCATTCTCTGCGCTTGTTCCTGCTTTTATTTGTCTATGAAACCATCTGCATTTTTCGCTGAATTTCTACTTTCCTCTGGTTTAACGTTTAAGGGTACATGGCTGTTTCAAGTTGGGTTGTCTTTGTATACCAAGGCATTTGCTTTGAAGGGTTGTCGTGCAATGTTGGTCTTGCCTGCTACTGGAGATGGTTTTGTACATTGTGATCTTGAAGAAGATGGTCTACGGGGCATTGCTTTGATGAATCTCATTTTCATTGGCCATGCTTTTCTAGTTTTGATCTTGGGTTTAGGTTTGGTTTGCTTATTGTCAAGCAACAGGAAGTTTAGGTTCGGTGAGGCGAGTGGCCCGTTGTTGGCTGAGCTTGGACCAGGGACTATGCTGATTCGCTCGTCTCCTGAGATTGAAATGGACTGA MASLATDLSASLFLIPIGLRRLLCSSSIYLNNPSLYRSKTWYLSEPKWKNFDLYSLILLLPIAAFSEIFLFLAFSGNPTYKFAFSQQSLAIFFFWALAILIVLRENVDPLLVSESFIFVFAGIAFLVEYSVIGKGITGLGGAFYHISGGLTILCACSCFYLSMKPSAFFAEFLLSSGLTFKGTWLFQVGLSLYTKAFALKGCRAMLVLPATGDGFVHCDLEEDGLRGIALMNLIFIGHAFLVLILGLGLVCLLSSNRKFRFGEASGPLLAELGPGTMLIRSSPEIEMD*
BLAST of Csa2G171910 vs. TrEMBL
Match: B0F830_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G171910 PE=4 SV=1) HSP 1 Score: 571.2 bits (1471), Expect = 7.0e-160 Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 1
BLAST of Csa2G171910 vs. TrEMBL
Match: B0F814_CUCME (Putative uncharacterized protein OS=Cucumis melo PE=4 SV=1) HSP 1 Score: 558.5 bits (1438), Expect = 4.7e-156 Identity = 281/288 (97.57%), Postives = 284/288 (98.61%), Query Frame = 1
BLAST of Csa2G171910 vs. TrEMBL
Match: M5Y310_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021783mg PE=4 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 3.0e-102 Identity = 188/288 (65.28%), Postives = 225/288 (78.12%), Query Frame = 1
BLAST of Csa2G171910 vs. TrEMBL
Match: A0A061ENF9_THECC (Family of Uncharacterized protein function, putative OS=Theobroma cacao GN=TCM_020971 PE=4 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 7.1e-96 Identity = 177/288 (61.46%), Postives = 217/288 (75.35%), Query Frame = 1
BLAST of Csa2G171910 vs. TrEMBL
Match: A0A151SPD1_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_002836 PE=4 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 4.8e-92 Identity = 170/289 (58.82%), Postives = 212/289 (73.36%), Query Frame = 1
BLAST of Csa2G171910 vs. TAIR10
Match: AT5G13890.1 (AT5G13890.1 Family of unknown function (DUF716) ) HSP 1 Score: 108.6 bits (270), Expect = 6.5e-24 Identity = 68/267 (25.47%), Postives = 120/267 (44.94%), Query Frame = 1
BLAST of Csa2G171910 vs. TAIR10
Match: AT1G55240.1 (AT1G55240.1 Family of unknown function (DUF716) ) HSP 1 Score: 56.6 bits (135), Expect = 2.9e-08 Identity = 61/276 (22.10%), Postives = 108/276 (39.13%), Query Frame = 1
BLAST of Csa2G171910 vs. TAIR10
Match: AT5G19870.1 (AT5G19870.1 Family of unknown function (DUF716) ) HSP 1 Score: 53.5 bits (127), Expect = 2.5e-07 Identity = 63/259 (24.32%), Postives = 106/259 (40.93%), Query Frame = 1
BLAST of Csa2G171910 vs. NCBI nr
Match: gi|164449272|gb|ABY56100.1| (hypothetical protein [Cucumis sativus]) HSP 1 Score: 571.2 bits (1471), Expect = 1.0e-159 Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 1
BLAST of Csa2G171910 vs. NCBI nr
Match: gi|659121478|ref|XP_008460679.1| (PREDICTED: uncharacterized protein LOC103499449 isoform X1 [Cucumis melo]) HSP 1 Score: 558.5 bits (1438), Expect = 6.7e-156 Identity = 281/288 (97.57%), Postives = 284/288 (98.61%), Query Frame = 1
BLAST of Csa2G171910 vs. NCBI nr
Match: gi|596261645|ref|XP_007224921.1| (hypothetical protein PRUPE_ppa021783mg [Prunus persica]) HSP 1 Score: 379.8 bits (974), Expect = 4.3e-102 Identity = 188/288 (65.28%), Postives = 225/288 (78.12%), Query Frame = 1
BLAST of Csa2G171910 vs. NCBI nr
Match: gi|645235208|ref|XP_008224165.1| (PREDICTED: uncharacterized protein LOC103323920 [Prunus mume]) HSP 1 Score: 378.6 bits (971), Expect = 9.5e-102 Identity = 188/288 (65.28%), Postives = 225/288 (78.12%), Query Frame = 1
BLAST of Csa2G171910 vs. NCBI nr
Match: gi|694352935|ref|XP_009357994.1| (PREDICTED: uncharacterized protein LOC103948673 isoform X2 [Pyrus x bretschneideri]) HSP 1 Score: 370.9 bits (951), Expect = 2.0e-99 Identity = 179/272 (65.81%), Postives = 213/272 (78.31%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |