Csa2G150010 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G150010
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 9005553 .. 9006220 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATTAGAAAGCGAAGGTGGGGGATGAAGGATACGGACATGCATGGTGGTGTCCATTCTCGTTGTCTTTGCGTCGCGGGGTCTAAGTCAAAACCCATTAACCAAAGTCTTGAACTCTAATTTCTTCACCAACTTTTTAATCCCATTTTTTCCCCCTAATTGCATTTGGAGTTTAATTAGAGTTTAATTAGAGAATTGAAGAAAAAGAAAAAGAAAAAGAAAAAAGAAATGGGGGGCAAGGCAAACTAAGCTCAGGCCTCAGCCAGGTTCAAATCGAAAAATAAAAAAAGAAAAGGAAAGTCTAAAGAGAAAAAAAACAAAAAACGAGACGAAGAAAAGTAGCAAACATTTCTCTGGTTTCTTCCTCTTCCTTCATCTTCGTGCAGTTTCATCTCTTCTGCTGCATCCCTCTCGATCTTTCCTTCTCTCTTTCACCACCGGACACCGCACCGCCAGGCGCCAGCCCTCCATTTCTGAGCTACCGGTTGCTTTGTTTCTTCCTTTTCGGCAACAGCGTCAAGCCCTCCCTGGTGGTGGTTCTTGATCTGCCTCACCCACGAGCTTCACCCACGCCTTCTCGGCTAACCGGCTGTCACTTCATCCAATCAGTGGCCAACAGATCGTTGACGTGTATTTCCCCTCTATTCGACGAGTATCATTACTGA

mRNA sequence

ATGGCCATTAGAAAGCGAAGGTGGGGGATGAAGGATACGGACATGCATGGTGGTGTCCATTCTCGTTGTCTTTGCTTTCATCTCTTCTGCTGCATCCCTCTCGATCTTTCCTTCTCTCTTTCACCACCGGACACCGCACCGCCAGGCGCCAGCCCTCCATTTCTGAGCTACCGGTTGCTTTGTTTCTTCCTTTTCGGCAACAGCGTCAAGCCCTCCCTGGTGGTGGTTCTTGATCTGCCTCACCCACGAGCTTCACCCACGCCTTCTCGGCTAACCGGCTGTCACTTCATCCAATCAGTGGCCAACAGATCGTTGACGTGTATTTCCCCTCTATTCGACGAGTATCATTACTGA

Coding sequence (CDS)

ATGGCCATTAGAAAGCGAAGGTGGGGGATGAAGGATACGGACATGCATGGTGGTGTCCATTCTCGTTGTCTTTGCTTTCATCTCTTCTGCTGCATCCCTCTCGATCTTTCCTTCTCTCTTTCACCACCGGACACCGCACCGCCAGGCGCCAGCCCTCCATTTCTGAGCTACCGGTTGCTTTGTTTCTTCCTTTTCGGCAACAGCGTCAAGCCCTCCCTGGTGGTGGTTCTTGATCTGCCTCACCCACGAGCTTCACCCACGCCTTCTCGGCTAACCGGCTGTCACTTCATCCAATCAGTGGCCAACAGATCGTTGACGTGTATTTCCCCTCTATTCGACGAGTATCATTACTGA

Protein sequence

MAIRKRRWGMKDTDMHGGVHSRCLCFHLFCCIPLDLSFSLSPPDTAPPGASPPFLSYRLLCFFLFGNSVKPSLVVVLDLPHPRASPTPSRLTGCHFIQSVANRSLTCISPLFDEYHY*
Homology
[Close]
BLAST of Csa2G150010 vs. TrEMBL
Match: A0A0A0LID0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G150010 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 5.9e-65
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1 

Query: 1   MAIRKRRWGMKDTDMHGGVHSRCLCFHLFCCIPLDLSFSLSPPDTAPPGASPPFLSYRLL 60
           MAIRKRRWGMKDTDMHGGVHSRCLCFHLFCCIPLDLSFSLSPPDTAPPGASPPFLSYRLL
Sbjct: 1   MAIRKRRWGMKDTDMHGGVHSRCLCFHLFCCIPLDLSFSLSPPDTAPPGASPPFLSYRLL 60

Query: 61  CFFLFGNSVKPSLVVVLDLPHPRASPTPSRLTGCHFIQSVANRSLTCISPLFDEYHY 118
           CFFLFGNSVKPSLVVVLDLPHPRASPTPSRLTGCHFIQSVANRSLTCISPLFDEYHY
Sbjct: 61  CFFLFGNSVKPSLVVVLDLPHPRASPTPSRLTGCHFIQSVANRSLTCISPLFDEYHY 117

[Close]
BLAST of Csa2G150010 vs. NCBI nr
Match: gi|700206389|gb|KGN61508.1| (hypothetical protein Csa_2G150010 [Cucumis sativus])

HSP 1 Score: 254.6 bits (649), Expect = 8.5e-65
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1 

Query: 1   MAIRKRRWGMKDTDMHGGVHSRCLCFHLFCCIPLDLSFSLSPPDTAPPGASPPFLSYRLL 60
           MAIRKRRWGMKDTDMHGGVHSRCLCFHLFCCIPLDLSFSLSPPDTAPPGASPPFLSYRLL
Sbjct: 1   MAIRKRRWGMKDTDMHGGVHSRCLCFHLFCCIPLDLSFSLSPPDTAPPGASPPFLSYRLL 60

Query: 61  CFFLFGNSVKPSLVVVLDLPHPRASPTPSRLTGCHFIQSVANRSLTCISPLFDEYHY 118
           CFFLFGNSVKPSLVVVLDLPHPRASPTPSRLTGCHFIQSVANRSLTCISPLFDEYHY
Sbjct: 61  CFFLFGNSVKPSLVVVLDLPHPRASPTPSRLTGCHFIQSVANRSLTCISPLFDEYHY 117

The following BLAST results are available for this feature:
BLAST of Csa2G150010 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LID0_CUCSA5.9e-65100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G150010 PE=4 SV=1[more]
BLAST of Csa2G150010 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206389|gb|KGN61508.1|8.5e-65100.00hypothetical protein Csa_2G150010 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU146084cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G150010.1Csa2G150010.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU146084CU146084transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G150010CSPI02G09460Wild cucumber (PI 183967)cpicuB065
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G150010Cucumber (Gy14) v1cgycuB296
Csa2G150010Melon (DHL92) v3.5.1cumeB134
Csa2G150010Watermelon (Charleston Gray)cuwcgB158
Csa2G150010Cucumber (Gy14) v2cgybcuB056
Csa2G150010Melon (DHL92) v3.6.1cumedB127