Csa2G149460 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G149460
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 8917213 .. 8917470 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAAACTGTCTAGACCAGAAGCTTTGTTCTTTTCAAAGGAGAAAATGGAGTCTTTCTTGTTCCGTGAAGGGAGTTATCAGGAGAGACTGAACTTCAAGGCTAATAGGATGCCAAACAAGACTATGAATATAGGGGCAGCTTATTCCGTTGCTCTTCTACAAAGGTTGTCGAAGGAGCCTCTGAAATTTCTAGTCTTGTTCAAGAAACACCGCTTTGCTGTATTCTGGTTGGATCTGAATTTTATTGTCGTTTGA

mRNA sequence

ATGGTGAAACTGTCTAGACCAGAAGCTTTGTTCTTTTCAAAGGAGAAAATGGAGTCTTTCTTGTTCCGTGAAGGGAGTTATCAGGAGAGACTGAACTTCAAGGCTAATAGGATGCCAAACAAGACTATGAATATAGGGGCAGCTTATTCCGTTGCTCTTCTACAAAGGTTGTCGAAGGAGCCTCTGAAATTTCTAGTCTTGTTCAAGAAACACCGCTTTGCTGTATTCTGGTTGGATCTGAATTTTATTGTCGTTTGA

Coding sequence (CDS)

ATGGTGAAACTGTCTAGACCAGAAGCTTTGTTCTTTTCAAAGGAGAAAATGGAGTCTTTCTTGTTCCGTGAAGGGAGTTATCAGGAGAGACTGAACTTCAAGGCTAATAGGATGCCAAACAAGACTATGAATATAGGGGCAGCTTATTCCGTTGCTCTTCTACAAAGGTTGTCGAAGGAGCCTCTGAAATTTCTAGTCTTGTTCAAGAAACACCGCTTTGCTGTATTCTGGTTGGATCTGAATTTTATTGTCGTTTGA

Protein sequence

MVKLSRPEALFFSKEKMESFLFREGSYQERLNFKANRMPNKTMNIGAAYSVALLQRLSKEPLKFLVLFKKHRFAVFWLDLNFIVV*
Homology
[Close]
BLAST of Csa2G149460 vs. TrEMBL
Match: A0A0A0LLB7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G149460 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.1e-39
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1 

Query: 1  MVKLSRPEALFFSKEKMESFLFREGSYQERLNFKANRMPNKTMNIGAAYSVALLQRLSKE 60
          MVKLSRPEALFFSKEKMESFLFREGSYQERLNFKANRMPNKTMNIGAAYSVALLQRLSKE
Sbjct: 1  MVKLSRPEALFFSKEKMESFLFREGSYQERLNFKANRMPNKTMNIGAAYSVALLQRLSKE 60

Query: 61 PLKFLVLFKKHRFAVFWLDLNFIVV 86
          PLKFLVLFKKHRFAVFWLDLNFIVV
Sbjct: 61 PLKFLVLFKKHRFAVFWLDLNFIVV 85

[Close]
BLAST of Csa2G149460 vs. NCBI nr
Match: gi|700206383|gb|KGN61502.1| (hypothetical protein Csa_2G149460 [Cucumis sativus])

HSP 1 Score: 170.2 bits (430), Expect = 1.5e-39
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1 

Query: 1  MVKLSRPEALFFSKEKMESFLFREGSYQERLNFKANRMPNKTMNIGAAYSVALLQRLSKE 60
          MVKLSRPEALFFSKEKMESFLFREGSYQERLNFKANRMPNKTMNIGAAYSVALLQRLSKE
Sbjct: 1  MVKLSRPEALFFSKEKMESFLFREGSYQERLNFKANRMPNKTMNIGAAYSVALLQRLSKE 60

Query: 61 PLKFLVLFKKHRFAVFWLDLNFIVV 86
          PLKFLVLFKKHRFAVFWLDLNFIVV
Sbjct: 61 PLKFLVLFKKHRFAVFWLDLNFIVV 85

The following BLAST results are available for this feature:
BLAST of Csa2G149460 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLB7_CUCSA1.1e-39100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G149460 PE=4 SV=1[more]
BLAST of Csa2G149460 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206383|gb|KGN61502.1|1.5e-39100.00hypothetical protein Csa_2G149460 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G149460.1Csa2G149460.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G149460Cucumber (Gy14) v1cgycuB296
Csa2G149460Melon (DHL92) v3.5.1cumeB134
Csa2G149460Watermelon (Charleston Gray)cuwcgB158
Csa2G149460Cucumber (Gy14) v2cgybcuB056
Csa2G149460Melon (DHL92) v3.6.1cumedB127