Csa2G149440 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G149440
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 8897020 .. 8897349 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGGTCATATCTTAGATTTCTCCATTTTTTAAGGGTTTCACTTTCAGTTTTCCCCCCCACTTCTCATGCTCACTGCGCTTTCTCTCCCTCGGTCTTGGACAATCGACTGTGTCGTCCGCCCCGTCCACCTTCCTCACCGTCGTTTACTATTTTGCCCTCTCACAGCCTCACGGCCTCTCTCTCATCCAGTCGTTCGATTTCCAATTGCAGCAAGTCCAACTCCAAAAGGCAAGTCTTTCTCATCCACTCTCTCATCTTCCTCACCGTCTTTTTATTTTTTTTTAATTAATCTTTTATTTTAAATCTCAGATCTTCATTTCTGATATCCCA

mRNA sequence

ATGCTCACTGCGCTTTCTCTCCCTCGGTCTTGGACAATCGACTGTGTCGTCCGCCCCGTCCACCTTCCTCACCGTCGTTTACTATTTTGCCCTCTCACAGCCTCACGGCCTCTCTCTCATCCAGTCGTTCGATTTCCAATTGCAGCAAGTCCAACTCCAAAAGATCTTCATTTCTGA

Coding sequence (CDS)

ATGCTCACTGCGCTTTCTCTCCCTCGGTCTTGGACAATCGACTGTGTCGTCCGCCCCGTCCACCTTCCTCACCGTCGTTTACTATTTTGCCCTCTCACAGCCTCACGGCCTCTCTCTCATCCAGTCGTTCGATTTCCAATTGCAGCAAGTCCAACTCCAAAAGATCTTCATTTCTGA

Protein sequence

MLTALSLPRSWTIDCVVRPVHLPHRRLLFCPLTASRPLSHPVVRFPIAASPTPKDLHF*
Homology
[Close]
BLAST of Csa2G149440 vs. TrEMBL
Match: A0A0A0LI07_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G149440 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 2.1e-26
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 1 

Query: 1  MLTALSLPRSWTIDCVVRPVHLPHRRLLFCPLTASRPLSHPVVRFPIAASPTPKDLHF 59
          MLTALSLPRSWTIDCVVRPVHLPHRRLLFCPLTASRPLSHPVVRFPIAASPTPKDLHF
Sbjct: 1  MLTALSLPRSWTIDCVVRPVHLPHRRLLFCPLTASRPLSHPVVRFPIAASPTPKDLHF 58

[Close]
BLAST of Csa2G149440 vs. NCBI nr
Match: gi|700206381|gb|KGN61500.1| (hypothetical protein Csa_2G149440 [Cucumis sativus])

HSP 1 Score: 125.6 bits (314), Expect = 3.0e-26
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 1 

Query: 1  MLTALSLPRSWTIDCVVRPVHLPHRRLLFCPLTASRPLSHPVVRFPIAASPTPKDLHF 59
          MLTALSLPRSWTIDCVVRPVHLPHRRLLFCPLTASRPLSHPVVRFPIAASPTPKDLHF
Sbjct: 1  MLTALSLPRSWTIDCVVRPVHLPHRRLLFCPLTASRPLSHPVVRFPIAASPTPKDLHF 58

The following BLAST results are available for this feature:
BLAST of Csa2G149440 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LI07_CUCSA2.1e-26100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G149440 PE=4 SV=1[more]
BLAST of Csa2G149440 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206381|gb|KGN61500.1|3.0e-26100.00hypothetical protein Csa_2G149440 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0034968 histone lysine methylation
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0018024 histone-lysine N-methyltransferase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU123222cucumber EST collection version 3.0transcribed_cluster
CU147361cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G149440.1Csa2G149440.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU123222CU123222transcribed_cluster
CU147361CU147361transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G149440CsGy2G009590Cucumber (Gy14) v2cgybcuB056
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G149440Melon (DHL92) v3.6.1cumedB127
Csa2G149440Cucumber (Gy14) v1cgycuB296
Csa2G149440Melon (DHL92) v3.5.1cumeB134