Csa2G148420 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G148420
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 8858493 .. 8858798 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGACGACGGAGAATCACCGACCTGTCCAGTGGTTCCAGTTCCAGCCTGCGTCCAGTCTCCAATCTGTTCGAGTCTCTGACAGTGGCTCCGACGCCAACAAATCAGGTCAGTCCAGCAGAGTTGACGACGAGCATGTGGGAGGCAAAACTGGTATTCGGTTGTTGGCGTGCAACTGGGTTGGGGCGACGGAGGACTAGCGAAGGGGAGAAGGAGTTGAGAATGGGAGAGGAAAAAGAAGAAAATGAGAATGGGGAAGGGACTAACGGAGAAGAAGGGAGAAGGCGAGAAAGGTTGAGGGTTTAG

mRNA sequence

ATGAGACGACGGAGAATCACCGACCTGTCCAGTGGTTCCAGTTCCAGCCTGCGTCCAGTCTCCAATCTGTTCGAGTCTCTGACAGTGGCTCCGACGCCAACAAATCAGGTCAGTCCAGCAGAGTTGACGACGAGCATGTGGGAGGCAAAACTGGTATTCGGTTGTTGGCGTGCAACTGGGTTGGGGCGACGGAGGACTAGCGAAGGGGAGAAGGAGTTGAGAATGGGAGAGGAAAAAGAAGAAAATGAGAATGGGGAAGGGACTAACGGAGAAGAAGGGAGAAGGCGAGAAAGGTTGAGGGTTTAG

Coding sequence (CDS)

ATGAGACGACGGAGAATCACCGACCTGTCCAGTGGTTCCAGTTCCAGCCTGCGTCCAGTCTCCAATCTGTTCGAGTCTCTGACAGTGGCTCCGACGCCAACAAATCAGGTCAGTCCAGCAGAGTTGACGACGAGCATGTGGGAGGCAAAACTGGTATTCGGTTGTTGGCGTGCAACTGGGTTGGGGCGACGGAGGACTAGCGAAGGGGAGAAGGAGTTGAGAATGGGAGAGGAAAAAGAAGAAAATGAGAATGGGGAAGGGACTAACGGAGAAGAAGGGAGAAGGCGAGAAAGGTTGAGGGTTTAG

Protein sequence

MRRRRITDLSSGSSSSLRPVSNLFESLTVAPTPTNQVSPAELTTSMWEAKLVFGCWRATGLGRRRTSEGEKELRMGEEKEENENGEGTNGEEGRRRERLRV*
Homology
[Close]
BLAST of Csa2G148420 vs. TrEMBL
Match: A0A0A0LLB1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G148420 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.0e-49
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 

Query: 1   MRRRRITDLSSGSSSSLRPVSNLFESLTVAPTPTNQVSPAELTTSMWEAKLVFGCWRATG 60
           MRRRRITDLSSGSSSSLRPVSNLFESLTVAPTPTNQVSPAELTTSMWEAKLVFGCWRATG
Sbjct: 1   MRRRRITDLSSGSSSSLRPVSNLFESLTVAPTPTNQVSPAELTTSMWEAKLVFGCWRATG 60

Query: 61  LGRRRTSEGEKELRMGEEKEENENGEGTNGEEGRRRERLRV 102
           LGRRRTSEGEKELRMGEEKEENENGEGTNGEEGRRRERLRV
Sbjct: 61  LGRRRTSEGEKELRMGEEKEENENGEGTNGEEGRRRERLRV 101

[Close]
BLAST of Csa2G148420 vs. NCBI nr
Match: gi|700206378|gb|KGN61497.1| (hypothetical protein Csa_2G148420 [Cucumis sativus])

HSP 1 Score: 203.8 bits (517), Expect = 1.5e-49
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 

Query: 1   MRRRRITDLSSGSSSSLRPVSNLFESLTVAPTPTNQVSPAELTTSMWEAKLVFGCWRATG 60
           MRRRRITDLSSGSSSSLRPVSNLFESLTVAPTPTNQVSPAELTTSMWEAKLVFGCWRATG
Sbjct: 1   MRRRRITDLSSGSSSSLRPVSNLFESLTVAPTPTNQVSPAELTTSMWEAKLVFGCWRATG 60

Query: 61  LGRRRTSEGEKELRMGEEKEENENGEGTNGEEGRRRERLRV 102
           LGRRRTSEGEKELRMGEEKEENENGEGTNGEEGRRRERLRV
Sbjct: 61  LGRRRTSEGEKELRMGEEKEENENGEGTNGEEGRRRERLRV 101

The following BLAST results are available for this feature:
BLAST of Csa2G148420 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLB1_CUCSA1.0e-49100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G148420 PE=4 SV=1[more]
BLAST of Csa2G148420 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206378|gb|KGN61497.1|1.5e-49100.00hypothetical protein Csa_2G148420 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G148420.1Csa2G148420.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G148420Watermelon (97103) v2cuwmbB141
Csa2G148420Wax gourdcuwgoB125
Csa2G148420Cucumber (Gy14) v1cgycuB296
Csa2G148420Cucurbita maxima (Rimu)cmacuB884
Csa2G148420Cucurbita moschata (Rifu)cmocuB869
Csa2G148420Cucurbita moschata (Rifu)cmocuB871
Csa2G148420Melon (DHL92) v3.5.1cumeB134
Csa2G148420Watermelon (Charleston Gray)cuwcgB147
Csa2G148420Watermelon (97103) v1cuwmB167
Csa2G148420Bottle gourd (USVL1VR-Ls)culsiB090
Csa2G148420Cucumber (Gy14) v2cgybcuB056
Csa2G148420Melon (DHL92) v3.6.1cumedB127