Csa2G138730 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa2G138730
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Pectinesterase; contains IPR011050 (Pectin lyase fold/virulence factor)
Location	Chr2 : 8538265 .. 8538598 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAGGGCTAGTAAGATTCTCACCCTAATGTTTTATTATAAATGTAAAAATGTTGGGGTGATATATATACTATTAGGGATGTTCAATATCAGTGGTTGGAGAAGCACTTCTTCCATACGGGTCTACAAGCTTCATAACAGCACAAGGAAGAACAAATCCAAATGATGCAAATGGTTTTGTATTCAAAGAATGCAATGTGTTTGGGAGTGGGTCAGCATACTTAGGAAGGCCATGGAGGGCTTATTCAAGAGTTATCTTTCACAACTCTAACTTCTCCAACATCATAAACCCTAATGGTTGGGATCCTTGGCAGTTTGTTGGTTATGAGTAA

mRNA sequence

ATGGGATGTTCAATATCAGTGGTTGGAGAAGCACTTCTTCCATACGGGTCTACAAGCTTCATAACAGCACAAGGAAGAACAAATCCAAATGATGCAAATGGTTTTGTATTCAAAGAATGCAATGTGTTTGGGAGTGGGTCAGCATACTTAGGAAGGCCATGGAGGGCTTATTCAAGAGTTATCTTTCACAACTCTAACTTCTCCAACATCATAAACCCTAATGGTTGGGATCCTTGGCAGTTTGTTGGTTATGAGTAA

Coding sequence (CDS)

ATGGGATGTTCAATATCAGTGGTTGGAGAAGCACTTCTTCCATACGGGTCTACAAGCTTCATAACAGCACAAGGAAGAACAAATCCAAATGATGCAAATGGTTTTGTATTCAAAGAATGCAATGTGTTTGGGAGTGGGTCAGCATACTTAGGAAGGCCATGGAGGGCTTATTCAAGAGTTATCTTTCACAACTCTAACTTCTCCAACATCATAAACCCTAATGGTTGGGATCCTTGGCAGTTTGTTGGTTATGAGTAA

Protein sequence

MGCSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRVIFHNSNFSNIINPNGWDPWQFVGYE*

Homology

[Close]

BLAST of Csa2G138730 vs. Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 3.7e-25
Identity = 51/83 (61.45%), Postives = 61/83 (73.49%), Query Frame = 1


Query: 3   CSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRVIF 62
           C I V+G  L P G   +ITAQGRTNP DANGF+F  C V+G+G A+LGRPWR YSRVIF
Sbjct: 200 CVIQVLGGQLEP-GLAGYITAQGRTNPYDANGFIFINCLVYGTGMAFLGRPWRGYSRVIF 259

Query: 63  HNSNFSNIINPNGWDPWQFVGYE 86
           +NSN ++++ P GWD W FVG+E
Sbjct: 260 YNSNLTDVVVPEGWDAWNFVGHE 281

[Close]

BLAST of Csa2G138730 vs. Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 5.8e-23
Identity = 51/83 (61.45%), Postives = 58/83 (69.88%), Query Frame = 1


Query: 3   CSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRVIF 62
           C I V+G  L P G T +ITAQGRTN NDANGFVF  C V G G AYLGR WR YSRVIF
Sbjct: 195 CVIQVLGGQLGP-GVTGYITAQGRTNANDANGFVFINCLVHGFGKAYLGRAWRPYSRVIF 254

Query: 63  HNSNFSNIINPNGWDPWQFVGYE 86
           +NSN +++++P GW  W + GYE
Sbjct: 255 YNSNLTDVVDPLGWWEWNYQGYE 276

[Close]

BLAST of Csa2G138730 vs. Swiss-Prot
Match: PME10_ARATH (Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.1e-17
Identity = 43/84 (51.19%), Postives = 51/84 (60.71%), Query Frame = 1


Query: 2   GCSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRVI 61
           GC++ +      P      ITAQGR +P D  GFVFK+C V GSG A LGR W++YSRVI
Sbjct: 202 GCTLKLRVGIYPPNEVYGTITAQGRDSPTDKGGFVFKDCTVMGSGKALLGRAWKSYSRVI 261

Query: 62  FHNSNFSNIINPNGWDPWQFVGYE 86
           F+ S FS+ I P GWD W+  G E
Sbjct: 262 FYRSMFSDNILPIGWDAWKAKGQE 285

[Close]

BLAST of Csa2G138730 vs. Swiss-Prot
Match: PME52_ARATH (Putative pectinesterase 52 OS=Arabidopsis thaliana GN=PME52 PE=2 SV=2)

HSP 1 Score: 78.6 bits (192), Expect = 3.8e-14
Identity = 37/83 (44.58%), Postives = 51/83 (61.45%), Query Frame = 1


Query: 3   CSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRVIF 62
           C I+    AL    S  +ITAQGR++ +D +GFVF   +V GS S YLGR +  +SRVIF
Sbjct: 157 CHINATAGALASKVSFGYITAQGRSSDSDPSGFVFLRGSVSGSTSVYLGRAYGPFSRVIF 216

Query: 63  HNSNFSNIINPNGWDPWQFVGYE 86
             ++ S++++P GW  W + GYE
Sbjct: 217 IQTDLSSVVHPEGWYSWHYGGYE 239

[Close]

BLAST of Csa2G138730 vs. Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-13
Identity = 33/59 (55.93%), Postives = 40/59 (67.80%), Query Frame = 1


Query: 21  ITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRVIFHNSNFSNIINPNGWDPW 80
           ITAQ RT+  + +GF F  C + GSGS +LGRPW AYSRV+F  S FSN++ P GW+ W
Sbjct: 221 ITAQMRTSATEKSGFTFLGCKLTGSGSTFLGRPWGAYSRVVFAYSFFSNVVAPQGWNQW 279

[Close]

BLAST of Csa2G138730 vs. TrEMBL
Match: A0A0A0LKA2_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_2G138730 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.4e-44
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1


Query: 1  MGCSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRV 60
          MGCSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRV
Sbjct: 1  MGCSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRV 60

Query: 61 IFHNSNFSNIINPNGWDPWQFVGYE 86
          IFHNSNFSNIINPNGWDPWQFVGYE
Sbjct: 61 IFHNSNFSNIINPNGWDPWQFVGYE 85

[Close]

BLAST of Csa2G138730 vs. TrEMBL
Match: W9SM62_9ROSA (Pectinesterase OS=Morus notabilis GN=L484_021593 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.7e-27
Identity = 59/83 (71.08%), Postives = 68/83 (81.93%), Query Frame = 1


Query: 3   CSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRVIF 62
           CSISVVG AL P G   FITAQGRTNPNDANGFVFK+C+VFGSGSA+LGRPWR Y+RV F
Sbjct: 188 CSISVVGGALEP-GFQGFITAQGRTNPNDANGFVFKDCHVFGSGSAFLGRPWRGYARVFF 247

Query: 63  HNSNFSNIINPNGWDPWQFVGYE 86
           +N+N S++I P GW+ W F G E
Sbjct: 248 YNTNISDVIVPQGWNAWNFAGQE 269

[Close]

BLAST of Csa2G138730 vs. TrEMBL
Match: A0A059CS97_EUCGR (Pectinesterase (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_C02449 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.0e-26
Identity = 58/83 (69.88%), Postives = 69/83 (83.13%), Query Frame = 1


Query: 3   CSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRVIF 62
           C+ISV+G AL   G T FITAQGR+NP+DA+GFVFKECNVFGSGSA LGR WRAY+RVIF
Sbjct: 173 CAISVLGGAL-GSGVTGFITAQGRSNPDDASGFVFKECNVFGSGSALLGRAWRAYARVIF 232

Query: 63  HNSNFSNIINPNGWDPWQFVGYE 86
           + SNF++++NP GWD W F G E
Sbjct: 233 YRSNFTDVVNPRGWDAWNFAGQE 254

[Close]

BLAST of Csa2G138730 vs. TrEMBL
Match: B9RWI7_RICCO (Pectinesterase OS=Ricinus communis GN=RCOM_1019830 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 3.9e-26
Identity = 55/84 (65.48%), Postives = 66/84 (78.57%), Query Frame = 1


Query: 2   GCSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRVI 61
           GC+I V+G+         FITAQGRTNP+DANGFVFK CNVFG GSAYLGRPWR YSRV+
Sbjct: 209 GCAIQVIGDG--------FITAQGRTNPSDANGFVFKRCNVFGRGSAYLGRPWRGYSRVL 268

Query: 62  FHNSNFSNIINPNGWDPWQFVGYE 86
           F+ SNF+N+I+P GW+ W FV +E
Sbjct: 269 FYQSNFTNVIHPEGWNAWDFVHHE 284

[Close]

BLAST of Csa2G138730 vs. TrEMBL
Match: A0A0D2S0P8_GOSRA (Pectinesterase OS=Gossypium raimondii GN=B456_006G222300 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 6.7e-26
Identity = 56/84 (66.67%), Postives = 65/84 (77.38%), Query Frame = 1


Query: 2   GCSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRVI 61
           G SI  +GE L P G   FITAQGR NPND+NGFVFK CNV+G G+ YLGRPWR +SRV+
Sbjct: 190 GSSIRFLGELLEP-GIAGFITAQGRENPNDSNGFVFKNCNVYGKGTTYLGRPWRGFSRVL 249

Query: 62  FHNSNFSNIINPNGWDPWQFVGYE 86
           F+N  FSNII+P+GWD W FVG E
Sbjct: 250 FYNCQFSNIIHPSGWDSWNFVGKE 272

[Close]

BLAST of Csa2G138730 vs. TAIR10
Match: AT3G24130.1 (AT3G24130.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 115.2 bits (287), Expect = 2.1e-26
Identity = 51/83 (61.45%), Postives = 61/83 (73.49%), Query Frame = 1


Query: 3   CSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRVIF 62
           C I V+G  L P G   +ITAQGRTNP DANGF+F  C V+G+G A+LGRPWR YSRVIF
Sbjct: 200 CVIQVLGGQLEP-GLAGYITAQGRTNPYDANGFIFINCLVYGTGMAFLGRPWRGYSRVIF 259

Query: 63  HNSNFSNIINPNGWDPWQFVGYE 86
           +NSN ++++ P GWD W FVG+E
Sbjct: 260 YNSNLTDVVVPEGWDAWNFVGHE 281

[Close]

BLAST of Csa2G138730 vs. TAIR10
Match: AT5G18990.1 (AT5G18990.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 107.8 bits (268), Expect = 3.3e-24
Identity = 51/83 (61.45%), Postives = 58/83 (69.88%), Query Frame = 1


Query: 3   CSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRVIF 62
           C I V+G  L P G T +ITAQGRTN NDANGFVF  C V G G AYLGR WR YSRVIF
Sbjct: 195 CVIQVLGGQLGP-GVTGYITAQGRTNANDANGFVFINCLVHGFGKAYLGRAWRPYSRVIF 254

Query: 63  HNSNFSNIINPNGWDPWQFVGYE 86
           +NSN +++++P GW  W + GYE
Sbjct: 255 YNSNLTDVVDPLGWWEWNYQGYE 276

[Close]

BLAST of Csa2G138730 vs. TAIR10
Match: AT2G19150.1 (AT2G19150.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 89.4 bits (220), Expect = 1.2e-18
Identity = 43/84 (51.19%), Postives = 51/84 (60.71%), Query Frame = 1


Query: 2   GCSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRVI 61
           GC++ +      P      ITAQGR +P D  GFVFK+C V GSG A LGR W++YSRVI
Sbjct: 202 GCTLKLRVGIYPPNEVYGTITAQGRDSPTDKGGFVFKDCTVMGSGKALLGRAWKSYSRVI 261

Query: 62  FHNSNFSNIINPNGWDPWQFVGYE 86
           F+ S FS+ I P GWD W+  G E
Sbjct: 262 FYRSMFSDNILPIGWDAWKAKGQE 285

[Close]

BLAST of Csa2G138730 vs. TAIR10
Match: AT5G26810.1 (AT5G26810.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 78.6 bits (192), Expect = 2.1e-15
Identity = 37/83 (44.58%), Postives = 51/83 (61.45%), Query Frame = 1


Query: 3   CSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRVIF 62
           C I+    AL    S  +ITAQGR++ +D +GFVF   +V GS S YLGR +  +SRVIF
Sbjct: 157 CHINATAGALASKVSFGYITAQGRSSDSDPSGFVFLRGSVSGSTSVYLGRAYGPFSRVIF 216

Query: 63  HNSNFSNIINPNGWDPWQFVGYE 86
             ++ S++++P GW  W + GYE
Sbjct: 217 IQTDLSSVVHPEGWYSWHYGGYE 239

[Close]

BLAST of Csa2G138730 vs. TAIR10
Match: AT2G21610.1 (AT2G21610.1 pectinesterase 11)

HSP 1 Score: 77.0 bits (188), Expect = 6.2e-15
Identity = 33/59 (55.93%), Postives = 40/59 (67.80%), Query Frame = 1


Query: 21  ITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRVIFHNSNFSNIINPNGWDPW 80
           ITAQ RT+  + +GF F  C + GSGS +LGRPW AYSRV+F  S FSN++ P GW+ W
Sbjct: 221 ITAQMRTSATEKSGFTFLGCKLTGSGSTFLGRPWGAYSRVVFAYSFFSNVVAPQGWNQW 279

[Close]

BLAST of Csa2G138730 vs. NCBI nr
Match: gi|700206350|gb|KGN61469.1| (hypothetical protein Csa_2G138730 [Cucumis sativus])

HSP 1 Score: 186.4 bits (472), Expect = 2.1e-44
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1


Query: 1  MGCSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRV 60
          MGCSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRV
Sbjct: 1  MGCSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRV 60

Query: 61 IFHNSNFSNIINPNGWDPWQFVGYE 86
          IFHNSNFSNIINPNGWDPWQFVGYE
Sbjct: 61 IFHNSNFSNIINPNGWDPWQFVGYE 85

[Close]

BLAST of Csa2G138730 vs. NCBI nr
Match: gi|778674132|ref|XP_011650140.1| (PREDICTED: probable pectinesterase 29 [Cucumis sativus])

HSP 1 Score: 184.5 bits (467), Expect = 7.8e-44
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 1


Query: 2   GCSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRVI 61
           GCSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRVI
Sbjct: 201 GCSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRVI 260

Query: 62  FHNSNFSNIINPNGWDPWQFVGYE 86
           FHNSNFSNIINPNGWDPWQFVGYE
Sbjct: 261 FHNSNFSNIINPNGWDPWQFVGYE 284

[Close]

BLAST of Csa2G138730 vs. NCBI nr
Match: gi|659114888|ref|XP_008457276.1| (PREDICTED: probable pectinesterase 29 [Cucumis melo])

HSP 1 Score: 177.6 bits (449), Expect = 9.6e-42
Identity = 81/84 (96.43%), Postives = 82/84 (97.62%), Query Frame = 1


Query: 2   GCSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRVI 61
           GCSISVVGEALLP GSTSFITAQGRT+PNDANGFVFKECNVFGSGSAYLGRPWRAYSRVI
Sbjct: 200 GCSISVVGEALLPLGSTSFITAQGRTDPNDANGFVFKECNVFGSGSAYLGRPWRAYSRVI 259

Query: 62  FHNSNFSNIINPNGWDPWQFVGYE 86
           FHNSNFSNIINPNGWDPW FVGYE
Sbjct: 260 FHNSNFSNIINPNGWDPWHFVGYE 283

[Close]

BLAST of Csa2G138730 vs. NCBI nr
Match: gi|703142522|ref|XP_010107773.1| (putative pectinesterase 29 [Morus notabilis])

HSP 1 Score: 129.0 bits (323), Expect = 3.9e-27
Identity = 59/83 (71.08%), Postives = 68/83 (81.93%), Query Frame = 1


Query: 3   CSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRVIF 62
           CSISVVG AL P G   FITAQGRTNPNDANGFVFK+C+VFGSGSA+LGRPWR Y+RV F
Sbjct: 188 CSISVVGGALEP-GFQGFITAQGRTNPNDANGFVFKDCHVFGSGSAFLGRPWRGYARVFF 247

Query: 63  HNSNFSNIINPNGWDPWQFVGYE 86
           +N+N S++I P GW+ W F G E
Sbjct: 248 YNTNISDVIVPQGWNAWNFAGQE 269

[Close]

BLAST of Csa2G138730 vs. NCBI nr
Match: gi|629116404|gb|KCW81079.1| (hypothetical protein EUGRSUZ_C02449, partial [Eucalyptus grandis])

HSP 1 Score: 127.1 bits (318), Expect = 1.5e-26
Identity = 58/83 (69.88%), Postives = 69/83 (83.13%), Query Frame = 1


Query: 3   CSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRPWRAYSRVIF 62
           C+ISV+G AL   G T FITAQGR+NP+DA+GFVFKECNVFGSGSA LGR WRAY+RVIF
Sbjct: 173 CAISVLGGAL-GSGVTGFITAQGRSNPDDASGFVFKECNVFGSGSALLGRAWRAYARVIF 232

Query: 63  HNSNFSNIINPNGWDPWQFVGYE 86
           + SNF++++NP GWD W F G E
Sbjct: 233 YRSNFTDVVNPRGWDAWNFAGQE 254

The following BLAST results are available for this feature:

BLAST of Csa2G138730 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PME29_ARATH	3.7e-25	61.45	Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1	[more]
PME55_ARATH	5.8e-23	61.45	Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1	[more]
PME10_ARATH	2.1e-17	51.19	Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1	[more]
PME52_ARATH	3.8e-14	44.58	Putative pectinesterase 52 OS=Arabidopsis thaliana GN=PME52 PE=2 SV=2	[more]
PME11_ARATH	1.1e-13	55.93	Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=3 SV=1	[more]

BLAST of Csa2G138730 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKA2_CUCSA	1.4e-44	100.00	Pectinesterase OS=Cucumis sativus GN=Csa_2G138730 PE=4 SV=1	[more]
W9SM62_9ROSA	2.7e-27	71.08	Pectinesterase OS=Morus notabilis GN=L484_021593 PE=4 SV=1	[more]
A0A059CS97_EUCGR	1.0e-26	69.88	Pectinesterase (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_C02449 PE=4 SV=1	[more]
B9RWI7_RICCO	3.9e-26	65.48	Pectinesterase OS=Ricinus communis GN=RCOM_1019830 PE=4 SV=1	[more]
A0A0D2S0P8_GOSRA	6.7e-26	66.67	Pectinesterase OS=Gossypium raimondii GN=B456_006G222300 PE=4 SV=1	[more]

BLAST of Csa2G138730 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G24130.1	2.1e-26	61.45	Pectin lyase-like superfamily protein	[more]
AT5G18990.1	3.3e-24	61.45	Pectin lyase-like superfamily protein	[more]
AT2G19150.1	1.2e-18	51.19	Pectin lyase-like superfamily protein	[more]
AT5G26810.1	2.1e-15	44.58	Pectin lyase-like superfamily protein	[more]
AT2G21610.1	6.2e-15	55.93	pectinesterase 11	[more]

BLAST of Csa2G138730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700206350\|gb\|KGN61469.1\|	2.1e-44	100.00	hypothetical protein Csa_2G138730 [Cucumis sativus]	[more]
gi\|778674132\|ref\|XP_011650140.1\|	7.8e-44	100.00	PREDICTED: probable pectinesterase 29 [Cucumis sativus]	[more]
gi\|659114888\|ref\|XP_008457276.1\|	9.6e-42	96.43	PREDICTED: probable pectinesterase 29 [Cucumis melo]	[more]
gi\|703142522\|ref\|XP_010107773.1\|	3.9e-27	71.08	putative pectinesterase 29 [Morus notabilis]	[more]
gi\|629116404\|gb\|KCW81079.1\|	1.5e-26	69.88	hypothetical protein EUGRSUZ_C02449, partial [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000070	Pectinesterase_cat
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold

Vocabulary: **Cellular Component**
Term	Definition
GO:0005618	cell wall

Vocabulary: **Molecular Function**
Term	Definition
GO:0030599	pectinesterase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0042545	cell wall modification

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042545	cell wall modification
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
cellular_component	GO:0005618	cell wall
molecular_function	GO:0045330	aspartyl esterase activity
molecular_function	GO:0030599	pectinesterase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa2G138730.1	Csa2G138730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000070	Pectinesterase, catalytic	PFAM	PF01095	Pectinesterase	coord: 17..80 score: 4.6
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 13..80 score: 7.38
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 3..80 score: 1.9
None	No IPR available	PANTHER	PTHR31321	FAMILY NOT NAMED	coord: 2..85 score: 5.8
None	No IPR available	PANTHER	PTHR31321:SF11	PECTINESTERASE 10-RELATED	coord: 2..85 score: 5.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa2G138730	Lsi09G011490	Bottle gourd (USVL1VR-Ls)	culsiB090

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa2G138730	Cucurbita pepo (Zucchini)	cpecuB305
Csa2G138730	Cucumber (Gy14) v2	cgybcuB056
Csa2G138730	Melon (DHL92) v3.6.1	cumedB127
Csa2G138730	Melon (DHL92) v3.6.1	cumedB140
Csa2G138730	Silver-seed gourd	carcuB0253
Csa2G138730	Silver-seed gourd	carcuB1089
Csa2G138730	Watermelon (97103) v2	cuwmbB141
Csa2G138730	Wax gourd	cuwgoB125
Csa2G138730	Cucumber (Gy14) v1	cgycuB296
Csa2G138730	Cucumber (Gy14) v1	cgycuB361
Csa2G138730	Cucurbita maxima (Rimu)	cmacuB237
Csa2G138730	Cucurbita maxima (Rimu)	cmacuB354
Csa2G138730	Cucurbita maxima (Rimu)	cmacuB884
Csa2G138730	Cucurbita moschata (Rifu)	cmocuB224
Csa2G138730	Cucurbita moschata (Rifu)	cmocuB344
Csa2G138730	Cucurbita moschata (Rifu)	cmocuB871
Csa2G138730	Melon (DHL92) v3.5.1	cumeB134
Csa2G138730	Melon (DHL92) v3.5.1	cumeB148
Csa2G138730	Watermelon (Charleston Gray)	cuwcgB145
Csa2G138730	Watermelon (Charleston Gray)	cuwcgB147
Csa2G138730	Watermelon (97103) v1	cuwmB131
Csa2G138730	Watermelon (97103) v1	cuwmB167
Csa2G138730	Cucurbita pepo (Zucchini)	cpecuB131