Csa2G123050 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G123050
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 8247927 .. 8248204 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCGCTAGAGTTAGTCGTCGAAAGTTCGCCAGTGAATCAGTCACTAGAGTTGGTGATCAGAGATTGGCCAATGACAATCACTAGAGAATAGTAAACCCTAAAAATTTTAATAAATGTTTTTACTAAATAATTTCAAGGTTGATTGGTGGGAAGCGGAGTTTGATCGGCAACGATTGCTAGAGTTGGTTGTTGGAAGTTTGCCTAGAGTCACCAGATGTGGTGGTTGGAGACTGACCAGTGATGATCATCGAAGGTGGTTTCCGAAAGTTGGTTGA

mRNA sequence

ATGATCGCTAGAGTTAGTCGTCGAAAGTTCGCCAGTGAATCAGTCACTAGAGTTGATTGGTGGGAAGCGGAGTTTGATCGGCAACGATTGCTAGAGTTGGTTGTTGGAAGTTTGCCTAGAGTCACCAGATGTGGTGGTTGGAGACTGACCAGTGATGATCATCGAAGGTGGTTTCCGAAAGTTGGTTGA

Coding sequence (CDS)

ATGATCGCTAGAGTTAGTCGTCGAAAGTTCGCCAGTGAATCAGTCACTAGAGTTGATTGGTGGGAAGCGGAGTTTGATCGGCAACGATTGCTAGAGTTGGTTGTTGGAAGTTTGCCTAGAGTCACCAGATGTGGTGGTTGGAGACTGACCAGTGATGATCATCGAAGGTGGTTTCCGAAAGTTGGTTGA

Protein sequence

MIARVSRRKFASESVTRVDWWEAEFDRQRLLELVVGSLPRVTRCGGWRLTSDDHRRWFPKVG*
Homology
[Close]
BLAST of Csa2G123050 vs. TrEMBL
Match: A0A0A0LI36_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123050 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 8.1e-29
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 1  MIARVSRRKFASESVTRVDWWEAEFDRQRLLELVVGSLPRVTRCGGWRLTSDDHRRWFPK 60
          MIARVSRRKFASESVTRVDWWEAEFDRQRLLELVVGSLPRVTRCGGWRLTSDDHRRWFPK
Sbjct: 1  MIARVSRRKFASESVTRVDWWEAEFDRQRLLELVVGSLPRVTRCGGWRLTSDDHRRWFPK 60

Query: 61 VG 63
          VG
Sbjct: 61 VG 62

[Close]
BLAST of Csa2G123050 vs. NCBI nr
Match: gi|700206324|gb|KGN61443.1| (hypothetical protein Csa_2G123050 [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 1.2e-28
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 1  MIARVSRRKFASESVTRVDWWEAEFDRQRLLELVVGSLPRVTRCGGWRLTSDDHRRWFPK 60
          MIARVSRRKFASESVTRVDWWEAEFDRQRLLELVVGSLPRVTRCGGWRLTSDDHRRWFPK
Sbjct: 1  MIARVSRRKFASESVTRVDWWEAEFDRQRLLELVVGSLPRVTRCGGWRLTSDDHRRWFPK 60

Query: 61 VG 63
          VG
Sbjct: 61 VG 62

The following BLAST results are available for this feature:
BLAST of Csa2G123050 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LI36_CUCSA8.1e-29100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123050 PE=4 SV=1[more]
BLAST of Csa2G123050 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206324|gb|KGN61443.1|1.2e-28100.00hypothetical protein Csa_2G123050 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G123050.1Csa2G123050.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G123050Watermelon (97103) v2cuwmbB145
Csa2G123050Wax gourdcuwgoB124
Csa2G123050Cucumber (Gy14) v1cgycuB382
Csa2G123050Cucurbita maxima (Rimu)cmacuB279
Csa2G123050Cucurbita moschata (Rifu)cmocuB266
Csa2G123050Cucurbita moschata (Rifu)cmocuB340
Csa2G123050Melon (DHL92) v3.5.1cumeB143
Csa2G123050Watermelon (Charleston Gray)cuwcgB151
Csa2G123050Watermelon (97103) v1cuwmB177
Csa2G123050Cucurbita pepo (Zucchini)cpecuB166
Csa2G123050Cucurbita pepo (Zucchini)cpecuB128
Csa2G123050Bottle gourd (USVL1VR-Ls)culsiB091
Csa2G123050Bottle gourd (USVL1VR-Ls)culsiB092
Csa2G123050Cucumber (Gy14) v2cgybcuB056
Csa2G123050Melon (DHL92) v3.6.1cumedB126
Csa2G123050Silver-seed gourdcarcuB0755
Csa2G123050Silver-seed gourdcarcuB0869