Csa2G122010 (gene) Cucumber (Chinese Long) v2

NameCsa2G122010
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 8153821 .. 8160752 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATTCTATCGCTTCCAGTATGTATGAGTGGGATACCATCTCCACAATTATTTTGAGTTGTCGAAAGAGAGAGACAGCGTCCCAGAGGCACGATACCCTTCGATTAGCGTATTATGTCATACTTACTATTAGTGGATGAGACGTCATGACAATTTTTGTTTGAAAACTTGATAAATAAATTGAAAATTTTAATTTTACAAGAAAGACTTTAGAATAACAATTATTTAAGTTGCTTAAAATGTAAAAAAATTATCTACATCTCTCGCCCCCACTGTCCAATGCTTCTTCATTTCGCCCATCTTAGTACAATCACCCCATACTAATGAGGAGTAGACTAGTCATTTTGCTCAATGACTAGTCTACTCGTCATACTATCTTAATTAATGTACACAACCAACATAATATAATCCCGAATAAGAACCATAAGTTCTCAAATTTTAGGATTTATTTAACTTCAGCTGTCACAGTCTGTCCTGCACGCAATCTTACTTGTCATGCGAGACTCGGCATGACTTTGAGCATTTCTGATTCATTAAATGCAAAAAAAAAAAACACTAAACTTAAGGTTATTAAGTTTTGCTTAATCGCCTAGCTTCTTAAACTTAACTTAGAAAACATACTTTAGACAATATAGACACTTAACACATCAGAAGTAATAAAACATAAACTTTTATTACTCAAAACATGCGTTATACAATTCGCTTATATCACTCTTAACAAAAGTAACACTGATAACTTGTAAAAATAAAGGTTATATTATAGCTTTTTAGGTAGAATAATGGAACCAAAACACATGATAAAAGTGTCAAAGCGTGTAACTTATGTTGTAAATATATAAGTACTTTGAAATATATTTTAGGAAAATTGCATCATATAACAAAAACATTTAGAAAAAAAAAACAGTCCATGAAACATTTTTTTTTTTGTATATTGCACATATGACAAATATTGTAAGTAATTAGTGATATCAGAAGGTTATCAAAGAGTTATCGAGTTTGCTACTTTAGCAATTTAGAAAATGTTATATGAGTCCTATTATCACAATTTTTTTTGCTATTTTTGCAAGCACCCCTATATTTTACATAAGCGCTCATGACCTATTCTACCATGTTTTAATGTCTAAACGCAGGTCTATGAACAAAAGAAGAAGTTAGCAAATCGCAAAGCCTCTCGCAAAAAGAATAGATGAGAATACCAAATCACAAAGCAAGAAGCAGTTTGCTAAATGACAAGAATGGTAATTGGAGATGATGTGACATGTCATAGACAATTTCGACGTACAACACTGACATGTTCAGAAGAATAGAAGTTTTCCGCTGAAAAGTTGCCTATAAAAGAACTTCATCCCTACCAAGATATACACGCTTGAATGAGCCATTTTAAAGGCCTAAATTAGCCAAAACCTAGAGTGTGGCGGAAAGGAATAGCCTTTCTAACGTCTGTAAAGAGTAGTTTTCTTCTTCTTCTCTTGTCATACTATGGTGAAAGCTTAGAGTTTGAGTGGCGAAGGTTCCATCTCTCATTTCCCCCAACTTATAATCATTTTCATTCTCTTTTCTTTACATTTTTGTATTTCTTTGTAATATATGTTGTGCATATTGTACAATGGTTGAAGACCTATATTCTTTAATATATATTACATATTTATACATTTTCAATCCATCATTTCTTTACTTTTCATTAGTCAATGTGTTATTTGTAGATTCAGTTTGTGATAAGAAGTTTTGTTTATAAGTCTTATCATGTTAATTGAGTTATTCTCATCGTTTGGCAAGCGTAAGTCGCCAACTACTGGAGAGGGTAAGTAGAAAGGACATGGATAACGCATGCAAGGAAGATGTTTCTCTTCCTTTGTGAGATAACTTTCATCACTTGTATCCCGAAAGGTGAACAAGTGTGGGCACTAGGCACCGAGAGGTTGTACCCTTAAATCACGAAGCTCTATGCATTTTATAAGTGAACTCTTCTAGATATATTTCATCTAATCACACACAGTCATATGGATTCTGATAGGTGACCATGTGTGGCATCTAATGACTCGAAGAGGAGCATGCCTTAATCATAAGTTGGTTGAGTAAGTTATATCGCATTGCTTAATCGCATTATTATGCATAAACATTCCTTCACTCTTTCTCGCATACAAGTTAGTTTGCATTCCCATCTAGCCAACTTATTCCATCTTTACAGATTCTCTACGATTAGATAGGTAGTTTAGTTTATTATTGCATTCATTATATTTGTTATTCTTTGATTCTTTTATACCGGTTAGATGATAAGTAAACCCTAAAACTAATGCCCTAAATCAATTTCCTATTTTCGGCCCTGTATTATCCAAATAAACCTACTGTTTTCGCTTGTACTTGAGCAAGATGTAGGAAAACTTGTACTAACAAGGACTTAGCTATTTAGCGAGCATCTCGCATGCTATGATCACAACCAATGAATTATCGTATAGAATCAATCTTGCGGTAAAGAGAGACGTAGTGAGCCCCTCACATGATGTGAACATGTTCAATGACATATCACCTAGACCAAATATAAACTCAATACAATTAACATATTGAGTCTGACCCAACCAAGTTTTTGGCATCGTTGCTAGAAAATTGATTTTTCAAATATTAGAACAGGGTTTTACTTTGGTTTTGGGCAAAACATTTGGTCCTGGTGAATCATGCGTTCAATCGAAGATCGTGTGAGGAGGTTCAAGGTACCAGAGGAATCTATGATTACTTGAACCACCCCTAGGGTTAGTGTATCTTTCGACAAGAAACTAAGAGGAATCTCAATGGATGCGTTTTATCACAAATGAATATGAGAAACTCCAATTGCCTGAGATCATGAATGATAGAATCTATTAAAGTTAGAACACACATGAAGGTGTCGTCGCGTAAAGTTGGTCAGATATGTATTTCATTTGACTATGCAATAAGGACCAAGAAAGATCATTTGAACATTGTGATGAATGATTGGGAGCAGAGACTTATTACGATGAACAATCAAGATGCAGAGAATTACGACGCAAAGAAAGTTACGCGAAGCGTAAGTGATGAAACCAAAACTCTTTTTCGCCAAGGAACTTAGACACAAAGATGCAATTGTAATGTATAACCTTTCCATCTCTTCTACAACCACATTTTTAAATTTGTGTACATATCATACTTGTACTTAGTTGTAATTATTTTATACTTGTAAAAATTAGTTTTGTAACTTAGGGTTGTATATTCTTCTCAATTTGGGGAAGCGAGTTATCTCACTGAATCTGTAGGCTATTAGGAATGGATTCTTACCGTCTGACTTGACAATCTGACTTCATCCCCCTATTTATACTAATTCTAAAACTGATTAGTCACCTTTAGACTCTTATAATTTTTCAACTCCCACTCTTAGTGGTATACGTGTAAGTTTAAGGTTTCACTTAATCCTGCTTAGCTTAAACCTTCACACGTGGCCCATTAAGTAAGCTTAGGAAGTTTTCGGGAAGTCTCCACTCTTAAACACCTAGTTCCAACTCGCGAAAACCTTTAATCGCCCAGTTGTACCAAATCGCCAAACATGATATCACATGACTCTTTCTTGCGAACTACTCAAATACCAATTCTTGTCGCCTAGTTCCAATCAAAACACCTCCTCACTTAGTAAAATTTTTGCCTTTCTTAATTACGGGTCTCACACCAACCCTATATTTATCTATCATGTATATTTAAACATAAATATTAGATAATAACATTAAGATATGAGTGAAGTTTAAAAATGATTTGATTTTATAATTTTGATTGTTGACAAGTAATTCACCAATATTTTCATTATTGACAATTTGTTTGAATATATAAGGTGGATACAATTAAATTAAATATATTTAATACTCGTACCTAAGAAACATCATTTGCATTCCAAATGGGAGGTTAGGTGGTTATAATGTATAGATATTTATATTTCTGAAAATGTGTATATATTGTAAAAAAGAAAAGAAATTGTGGATTTACGAAAACATCCCTGGAAGAAAAAACAGAAAAAAGGAGTGGGAAAAGAAGAAGTGATGAAATAATAAGAAAAGAAAAGTTGTCGTTTAGTGTGAAGGAAAAAGGCTATTTATGGAATTGAAAGGGCATTAAAGAGAGGGCTGCCCCATTGTATCTGAAGATGGTGTTCTAAGATTCCATATGAGCCGCCCACATCAATTCATCAAATTCATTTTTCTTTAAACCAATAATAAAAACTTTTTTATTATTATTTAATTACCACATCACTTCCACCACAATTTCTTTTCTTTTCTTCTCTTCCACTTGGACTTCAGTTTTATTGTTGCCTCCTTTTTTTTTTTTCTCTGTTTTTCTTTCTCTCTTTTTTCCCCCATTGCTCTCCCCCCCTCTCTCTCAAATCTCTCTAACAAGGTTTCCACATGCCTTAGGTTGCTACTCTACTTTCTACTCTTCCCGGATTCTCTTCTACTAATTGCTTCCTCACGGTACATCATTTCTGTTTCCTTTTCCTTTCTCCTATTCTTCCCTGATTCTGCCTTCTCTTTTCTCTTAGATTTTTTTTTCTTTTTGTGTTTTCGGATTTCATTTCATTTCTGTCTTTTCTTTTACTTCAATCTATTACTATTAGGACTAGAATCTTCCACTATTACCTGATTATCTATGTGTCTTGTGCATTTTGTTGTTAGAAATCCTAACTTTTGGTTTCTGGTCGCCTCGTCTTTTTTTTTTTTTTTTTCTCGATATGATGGTTGTGATTGGGCGTACGTATCTTCTTTTTGAATCTCTTTTGCTCTCTGTATATGGATTTGTTTGTTTGTTTGTTTGTTTTTTTTTTAAAATTCCTTAGTTGTTGAATTGGGATGTATTTGAAGATCTAACAAGGGTATCCTTTAATTATTTTTTATTTGCATGATTAAGCCCTGTTTATACCCAAAAGTTTATTTTCTTGATTTTCTGTGGGAGTGAAGCTAGTGATTCGTGTCGCCTATTATGATTCATGGAGGTTGACTTCATTTGTATTATTTGCTTTTTCTTCGATTTGCGTGAAGTTCTGTTTTCTTTATGGTTAAGAAATCCTATTTTTTGTTTTTTTGTTTTTTTTATATAAAGTATATTTACTACTACTTGGCCGGTTGTTACTTTATGGTTTCAGAACATTTTGAGGCGATATGCTATGATGCTAATCAGTGGTAGCTGTAATTTTAAAAGGAGATTAGGAATTGGAACATATTTACTGCTGAAGAATCCTTATTGCACTTCAAAACTATTGAGTCTTGTGTTCTATATCAGGAAACTGGGGGCGATATAGAAAACTAGTTTTTGTCAAAAACATGAATGAACAAAATCTAAGGAGAGAAACTCACAAAAAAGATTGAAAGAATAGGGTCTTCTTGAAACAAGGGGGACACCGTCACAAAACAATTATAGAAGTGTTTCCCAACTTCTGGTAATAAAAAACAAAGGATAGTTATATGATAGAGTCCATGGATAAGAGTTGGATTGGATATTACCACATTTCAAATCTTCACATTCTCCCAATAGTTGTTTTTTCAGAAGATCACTCCGTTTCGTTTCTGCTTTTAGGGAAGAAAAACCTAGGAACTTGCCTGCCAAGGAACCTGAACCCTTCCCTGGAAATGAAAATCTGCTACTTCCATTACCGGTTCTTGAATGTTCGATATTTGATGAGTGAAGGCTAAACTGAACTCTTAACAAAACTGATTTCAAATTGTAGCTGATTAGTAGTATAACCACAAAAGATTATTTACAATTTCTGCATAAAATCAGAAGTAACAGTTCTTCCCAAGGAGAAACACAATTCAAGATATGTTATTATTATTTTTGTTGTGGACATGGTCATGATTTTATTCACAAGGAAGGATCAAAGAAAGAGTTGTTTCCACTCAAAGAGCTACAAGAGCTTTTGAGAAAGGATTTCACTCATGTTAGTTTGGGTTTCTGAATATCCTTCTTGCAATTGTAAATCCTATAAAACTTATAATTGTTATTGTTGCTAATTATCAAGGACACGCCATATAGTGAAATGTCTCAATGAAAAATGTGATAAGAAAAGGTATTTCTAAGTGAAGTGTACAAGACTAAACCTGTTACTGAAGTTGGATGCTTAAAAGAAGTTGACAAACAAAAGGGTATCATTTCAACAATCATATAAACTTTAGCTCATTATCTACATGTATGCGTTCTGCAGCATCAGCAAAATTACATCTGTTTCAACTTAGTTTTTATGTCGTTCTATTTCTTTCTATTTTACCCTCTTTACTGCTTGCTTTCTCATTAGTTTTTCCTTACTTTCTGTTGCATCCACGTGACTTAAAGAGACTTTGACCTCATCTACCATGCGTCCAAAATTCCAAATGGATTTACAACGAATATGCATTGAAGTTTGTATATAATTGTTTGTCCATTAATGAAGTTGTAAAGAAGCAACGACAATAAATAAAAAGGTCCAAAGTAATGTTTCTGCTATTGTTGGAGTTGTGAACTGATATGTTATTACATGCTCCTCTAGTGCCATTTTTCAAGCATGTAACCATTTCATTTATTGTTTGCATTTAACTTAAATTTTGGATTAGCATCCTGCCACTGCACTCATTTCAGATTGGTGGTTATTGTATCTGTCCATAACTTTATTTATGTTTCAATTAAGAAGTCATGTTATTTCAGAAAGTTGGGATGTAGAACTTGTAACTTTTTTCTATAATGTTCTCAAAATTGTATTGACAGTAGTCATCTGACTAGAGATTTATTTTAAAACATTCTTCCTGACATCAACTTCAAATTCCTCTTTGCTTCGACAGTACCTACTATTCTGCTATTGTTGTGTCCAACAATGAGTTTGAATTGATGGAGAGGCATCATTTCATTGACATTGGTCGTGTGAACTGTCTTATAAGATGTACTACTTTCAGGGTTGATGAAGCTGAATGA

mRNA sequence

ATGTCATTCTATCGCTTCCATTTTATTGTTGCCTCCTTTTTTTTTTTTCTCTGTTTTTCTTTCTCTCTTTTTTCCCCCATTGCTCTCCCCCCCTCTCTCTCAAATCTCTCTAACAAGGTTTCCACATGCCTTAGGTTGCTACTCTACTTTCTACTCTTCCCGGATTCTCTTCTACTAATTGCTTCCTCACGTACCTACTATTCTGCTATTGTTGTGTCCAACAATGAGTTTGAATTGATGGAGAGGCATCATTTCATTGACATTGGTCGTGTGAACTGTCTTATAAGATGTACTACTTTCAGGGTTGATGAAGCTGAATGA

Coding sequence (CDS)

ATGTCATTCTATCGCTTCCATTTTATTGTTGCCTCCTTTTTTTTTTTTCTCTGTTTTTCTTTCTCTCTTTTTTCCCCCATTGCTCTCCCCCCCTCTCTCTCAAATCTCTCTAACAAGGTTTCCACATGCCTTAGGTTGCTACTCTACTTTCTACTCTTCCCGGATTCTCTTCTACTAATTGCTTCCTCACGTACCTACTATTCTGCTATTGTTGTGTCCAACAATGAGTTTGAATTGATGGAGAGGCATCATTTCATTGACATTGGTCGTGTGAACTGTCTTATAAGATGTACTACTTTCAGGGTTGATGAAGCTGAATGA

Protein sequence

MSFYRFHFIVASFFFFLCFSFSLFSPIALPPSLSNLSNKVSTCLRLLLYFLLFPDSLLLIASSRTYYSAIVVSNNEFELMERHHFIDIGRVNCLIRCTTFRVDEAE*
BLAST of Csa2G122010 vs. TrEMBL
Match: A0A0A0LL18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G122010 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 3.6e-53
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1

Query: 1   MSFYRFHFIVASFFFFLCFSFSLFSPIALPPSLSNLSNKVSTCLRLLLYFLLFPDSLLLI 60
           MSFYRFHFIVASFFFFLCFSFSLFSPIALPPSLSNLSNKVSTCLRLLLYFLLFPDSLLLI
Sbjct: 1   MSFYRFHFIVASFFFFLCFSFSLFSPIALPPSLSNLSNKVSTCLRLLLYFLLFPDSLLLI 60

Query: 61  ASSRTYYSAIVVSNNEFELMERHHFIDIGRVNCLIRCTTFRVDEAE 107
           ASSRTYYSAIVVSNNEFELMERHHFIDIGRVNCLIRCTTFRVDEAE
Sbjct: 61  ASSRTYYSAIVVSNNEFELMERHHFIDIGRVNCLIRCTTFRVDEAE 106

BLAST of Csa2G122010 vs. NCBI nr
Match: gi|700206318|gb|KGN61437.1| (hypothetical protein Csa_2G122010 [Cucumis sativus])

HSP 1 Score: 215.3 bits (547), Expect = 5.2e-53
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1

Query: 1   MSFYRFHFIVASFFFFLCFSFSLFSPIALPPSLSNLSNKVSTCLRLLLYFLLFPDSLLLI 60
           MSFYRFHFIVASFFFFLCFSFSLFSPIALPPSLSNLSNKVSTCLRLLLYFLLFPDSLLLI
Sbjct: 1   MSFYRFHFIVASFFFFLCFSFSLFSPIALPPSLSNLSNKVSTCLRLLLYFLLFPDSLLLI 60

Query: 61  ASSRTYYSAIVVSNNEFELMERHHFIDIGRVNCLIRCTTFRVDEAE 107
           ASSRTYYSAIVVSNNEFELMERHHFIDIGRVNCLIRCTTFRVDEAE
Sbjct: 61  ASSRTYYSAIVVSNNEFELMERHHFIDIGRVNCLIRCTTFRVDEAE 106

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LL18_CUCSA3.6e-53100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G122010 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700206318|gb|KGN61437.1|5.2e-53100.00hypothetical protein Csa_2G122010 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU095026cucumber EST collection version 3.0transcribed_cluster
CU117830cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G122010.1Csa2G122010.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU117830CU117830transcribed_cluster
CU095026CU095026transcribed_cluster


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G122010Cucumber (Gy14) v1cgycuB382
Csa2G122010Cucurbita moschata (Rifu)cmocuB340
Csa2G122010Melon (DHL92) v3.5.1cumeB135
Csa2G122010Cucurbita pepo (Zucchini)cpecuB128
Csa2G122010Bottle gourd (USVL1VR-Ls)culsiB091
Csa2G122010Cucumber (Gy14) v2cgybcuB056
Csa2G122010Melon (DHL92) v3.6.1cumedB126