Csa2G118340 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G118340
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 7943458 .. 7943616 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATAAGAGAAACATATAGAGGTTGGGTTGAGAAGGATGACAAAGAAAGTGTGAGAGAACTAAAAAAGAAGAAGTGGGAGGCTAACACTTGGATTAAAGAAGAAGAAGATGGAGGTTATGCATTTGAGGTTTTGAGCCGTGAATTATTCGGTTAG

mRNA sequence

ATGAAGATAAGAGAAACATATAGAGGTTGGGTTGAGAAGGATGACAAAGAAAGTGTGAGAGAACTAAAAAAGAAGAAGTGGGAGGCTAACACTTGGATTAAAGAAGAAGAAGATGGAGGTTATGCATTTGAGGTTTTGAGCCGTGAATTATTCGGTTAG

Coding sequence (CDS)

ATGAAGATAAGAGAAACATATAGAGGTTGGGTTGAGAAGGATGACAAAGAAAGTGTGAGAGAACTAAAAAAGAAGAAGTGGGAGGCTAACACTTGGATTAAAGAAGAAGAAGATGGAGGTTATGCATTTGAGGTTTTGAGCCGTGAATTATTCGGTTAG

Protein sequence

MKIRETYRGWVEKDDKESVRELKKKKWEANTWIKEEEDGGYAFEVLSRELFG*
Homology
[Close]
BLAST of Csa2G118340 vs. TrEMBL
Match: A0A0A0LN66_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G118340 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.6e-22
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 1 

Query: 1  MKIRETYRGWVEKDDKESVRELKKKKWEANTWIKEEEDGGYAFEVLSRELFG 53
          MKIRETYRGWVEKDDKESVRELKKKKWEANTWIKEEEDGGYAFEVLSRELFG
Sbjct: 1  MKIRETYRGWVEKDDKESVRELKKKKWEANTWIKEEEDGGYAFEVLSRELFG 52

[Close]
BLAST of Csa2G118340 vs. NCBI nr
Match: gi|700206292|gb|KGN61411.1| (hypothetical protein Csa_2G118340 [Cucumis sativus])

HSP 1 Score: 112.5 bits (280), Expect = 2.3e-22
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 1 

Query: 1  MKIRETYRGWVEKDDKESVRELKKKKWEANTWIKEEEDGGYAFEVLSRELFG 53
          MKIRETYRGWVEKDDKESVRELKKKKWEANTWIKEEEDGGYAFEVLSRELFG
Sbjct: 1  MKIRETYRGWVEKDDKESVRELKKKKWEANTWIKEEEDGGYAFEVLSRELFG 52

The following BLAST results are available for this feature:
BLAST of Csa2G118340 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LN66_CUCSA1.6e-22100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G118340 PE=4 SV=1[more]
BLAST of Csa2G118340 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206292|gb|KGN61411.1|2.3e-22100.00hypothetical protein Csa_2G118340 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G118340.1Csa2G118340.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G118340CSPI02G08620Wild cucumber (PI 183967)cpicuB065
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G118340Cucurbita moschata (Rifu)cmocuB870
Csa2G118340Melon (DHL92) v3.5.1cumeB135
Csa2G118340Watermelon (Charleston Gray)cuwcgB154
Csa2G118340Watermelon (97103) v1cuwmB173
Csa2G118340Cucurbita pepo (Zucchini)cpecuB128
Csa2G118340Cucurbita pepo (Zucchini)cpecuB304
Csa2G118340Bottle gourd (USVL1VR-Ls)culsiB088
Csa2G118340Cucumber (Gy14) v2cgybcuB056
Csa2G118340Melon (DHL92) v3.6.1cumedB126
Csa2G118340Silver-seed gourdcarcuB0255
Csa2G118340Silver-seed gourdcarcuB1088
Csa2G118340Watermelon (97103) v2cuwmbB148
Csa2G118340Wax gourdcuwgoB122
Csa2G118340Cucumber (Gy14) v1cgycuB382
Csa2G118340Cucurbita maxima (Rimu)cmacuB351
Csa2G118340Cucurbita maxima (Rimu)cmacuB883
Csa2G118340Cucurbita moschata (Rifu)cmocuB340