Csa2G116260 (gene) Cucumber (Chinese Long) v2

NameCsa2G116260
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 7865904 .. 7866338 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGACGCGAACACACTAGCAGCCGACTGCATTGTCATATGCTGCTGCTGTCAATGCCTGGCGTTGCAGATCATTCTCCTTTTGTTCCTCAAGCTTCCATGGAAACTCGTTCGAAAGACAAGAGAGTTTGCAAAGAAAAGGCTGAGACTGAGAGAAAAAGAGGAGAAGATGGTAGGGAAAGAAAAGGGTTGTGGGAATGAGGTTAGAGGAATTAGTAATGGAAGTTGTATGAGAAATGAAGAAAAGGGATTGGGTTTGAGTTGTTGTATGGAAGAGATTGAGAAGGTTATGCAGGATTTGCATGAGAAAGGAGAGTTTGGTTTTGGAAGCTTTTGGGGAAATGGTAATACAAGTTCAGGTTCCTGCAGAGATGATCTGTTTAGTCCTACAAATGTACAGTATCAATTAATTCAAGTAATTCCTTCCACATGA

mRNA sequence

ATGGAAGACGCGAACACACTAGCAGCCGACTGCATTGTCATATGCTGCTGCTGTCAATGCCTGGCGTTGCAGATCATTCTCCTTTTGTTCCTCAAGCTTCCATGGAAACTCGTTCGAAAGACAAGAGAGTTTGCAAAGAAAAGGCTGAGACTGAGAGAAAAAGAGGAGAAGATGGTAGGGAAAGAAAAGGGTTGTGGGAATGAGGTTAGAGGAATTAGTAATGGAAGTTGTATGAGAAATGAAGAAAAGGGATTGGGTTTGAGTTGTTGTATGGAAGAGATTGAGAAGGTTATGCAGGATTTGCATGAGAAAGGAGAGTTTGGTTTTGGAAGCTTTTGGGGAAATGGTAATACAAGTTCAGGTTCCTGCAGAGATGATCTGTTTAGTCCTACAAATGTACAGTATCAATTAATTCAAGTAATTCCTTCCACATGA

Coding sequence (CDS)

ATGGAAGACGCGAACACACTAGCAGCCGACTGCATTGTCATATGCTGCTGCTGTCAATGCCTGGCGTTGCAGATCATTCTCCTTTTGTTCCTCAAGCTTCCATGGAAACTCGTTCGAAAGACAAGAGAGTTTGCAAAGAAAAGGCTGAGACTGAGAGAAAAAGAGGAGAAGATGGTAGGGAAAGAAAAGGGTTGTGGGAATGAGGTTAGAGGAATTAGTAATGGAAGTTGTATGAGAAATGAAGAAAAGGGATTGGGTTTGAGTTGTTGTATGGAAGAGATTGAGAAGGTTATGCAGGATTTGCATGAGAAAGGAGAGTTTGGTTTTGGAAGCTTTTGGGGAAATGGTAATACAAGTTCAGGTTCCTGCAGAGATGATCTGTTTAGTCCTACAAATGTACAGTATCAATTAATTCAAGTAATTCCTTCCACATGA

Protein sequence

MEDANTLAADCIVICCCCQCLALQIILLLFLKLPWKLVRKTREFAKKRLRLREKEEKMVGKEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWGNGNTSSGSCRDDLFSPTNVQYQLIQVIPST*
BLAST of Csa2G116260 vs. TrEMBL
Match: A0A0A0LKX5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G116260 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 3.0e-79
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1

Query: 1   MEDANTLAADCIVICCCCQCLALQIILLLFLKLPWKLVRKTREFAKKRLRLREKEEKMVG 60
           MEDANTLAADCIVICCCCQCLALQIILLLFLKLPWKLVRKTREFAKKRLRLREKEEKMVG
Sbjct: 1   MEDANTLAADCIVICCCCQCLALQIILLLFLKLPWKLVRKTREFAKKRLRLREKEEKMVG 60

Query: 61  KEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWGNGNTSS 120
           KEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWGNGNTSS
Sbjct: 61  KEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWGNGNTSS 120

Query: 121 GSCRDDLFSPTNVQYQLIQVIPST 145
           GSCRDDLFSPTNVQYQLIQVIPST
Sbjct: 121 GSCRDDLFSPTNVQYQLIQVIPST 144

BLAST of Csa2G116260 vs. TrEMBL
Match: A0A0L9TNH6_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g155300 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 8.4e-29
Identity = 68/152 (44.74%), Postives = 95/152 (62.50%), Query Frame = 1

Query: 1   MEDANTLAADCIVICCCCQCLALQIILLLFLKLPWKLVRKTREFAKKRLRLREKEEKMVG 60
           ME+ N LAADC+VI CCCQCL LQI++ L LKLPWKL+RKTRE+AKK+LR R+  +    
Sbjct: 1   MEEWNMLAADCVVISCCCQCLLLQILVFLMLKLPWKLIRKTREYAKKKLRQRKGNDDKKK 60

Query: 61  KEKGCGNEVRGISNGSCMR-------NEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFW 120
            E  C  +V    +    R        + +G G   CM+E+EK+M++L++KGEFGFGSFW
Sbjct: 61  IESACYEDVLVRIHEQSFRIQGEMTVRDGEGFGCGGCMDEVEKIMEELYQKGEFGFGSFW 120

Query: 121 GNGNTSSGSCRDDLFS-PTNVQYQLIQVIPST 145
           G       +    + + P  V+YQ+I ++  T
Sbjct: 121 GREEPCGFAVPTKIHNDPNLVRYQVIDLLIKT 152

BLAST of Csa2G116260 vs. TrEMBL
Match: V7CHJ1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G281600g PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 5.4e-28
Identity = 74/155 (47.74%), Postives = 99/155 (63.87%), Query Frame = 1

Query: 1   MEDANTLAADCIVICCCCQCLALQIILLLFLKLPWKLVRKTREFAKKRLRLRE--KEEKM 60
           ME+ N L ADC+VI CCCQCL LQI++ L LKLPWK++RKTRE+AKK+LR R+   E   
Sbjct: 1   MEEWNMLGADCVVISCCCQCLVLQILVFLLLKLPWKVIRKTREYAKKKLRQRKGNDERAK 60

Query: 61  VGKEKGCGNEVR-GISNGSCMRNEEKGLGLSC--CMEEIEKVMQDLHEKGEFGFGSFWGN 120
           +  E GC  +V   I +    R+   G G SC  CMEE+EK+M++ +EKGEFGFGSFWG 
Sbjct: 61  MKIESGCYEDVLVRIDHEQSFRD---GEGFSCGGCMEEVEKMMEEFYEKGEFGFGSFWGR 120

Query: 121 GNTSSGSCRDDLFSPTN-------VQYQLIQVIPS 144
                G+C   + +  N       V+YQ+I ++ S
Sbjct: 121 ---ELGTCGCGVPAIVNHHSDDNFVRYQIIDLVGS 149

BLAST of Csa2G116260 vs. TrEMBL
Match: W9QNZ2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026566 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.1e-27
Identity = 79/164 (48.17%), Postives = 102/164 (62.20%), Query Frame = 1

Query: 1   MEDANTLAADCIVICCCCQCLALQIILLLFLKLPWKLVRKTREFAKKRLRLREKEEK--- 60
           MED N LAADCIVI  CCQCL LQII+ + LK+P+KL+RKTR+FAKK+L+ R++  K   
Sbjct: 1   MEDGNALAADCIVISSCCQCLILQIIVFVLLKIPYKLIRKTRDFAKKKLQRRKRRGKMVI 60

Query: 61  -MVGKEKGCGNEVRGISNGSC--------MRNEEKGLGLSCCMEEIEKVMQDLHEKGEFG 120
            MVGK K   NE+ GI   S         +  +EK     CCM+E+EKVM++L +KGEF 
Sbjct: 61  NMVGKYK---NELVGIVGESLKIQATSGRVSADEKKSDCGCCMKEVEKVMEELSQKGEFS 120

Query: 121 FGSFWGNGNTSS----GSC-----RDDLFSPTNVQYQLIQVIPS 144
           FGSFW     S+     SC      DD F    V+YQLI+++ S
Sbjct: 121 FGSFWCKEEESAEIFPASCVQKHESDDGF----VRYQLIKMVGS 157

BLAST of Csa2G116260 vs. TrEMBL
Match: M5XZU9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012803mg PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.3e-26
Identity = 66/154 (42.86%), Postives = 93/154 (60.39%), Query Frame = 1

Query: 1   MEDANTLAADCIVICCCCQCLALQIILLLFLKLPWKLVRKTREFAKKRLRLREKEEKMVG 60
           MED   +AADC+VI CCCQCL LQI + +  KLP KL++KTR++  K+L+ R+++E +V 
Sbjct: 1   MEDCGMVAADCVVISCCCQCLILQITIFILFKLPCKLIKKTRDYTMKKLQQRKRKEIVVE 60

Query: 61  KEKGCGNEVRGISN-------GSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFW 120
            +   G  V            G  +R+ E G    CCMEE++KV+Q+L ++GEFGFGSFW
Sbjct: 61  SQ---GEIVLDPFKDDFVSILGESIRSIEAGHSCRCCMEEVDKVLQELSQRGEFGFGSFW 120

Query: 121 GNGNTSSG----SCRDDLFSPTNVQYQLIQVIPS 144
           G           S  DD F    VQ+QLI+++ S
Sbjct: 121 GRREMGCSPIHHSAEDDQFDSRFVQFQLIEMVGS 151

BLAST of Csa2G116260 vs. TAIR10
Match: AT3G25597.1 (AT3G25597.1 unknown protein)

HSP 1 Score: 92.0 bits (227), Expect = 3.1e-19
Identity = 54/146 (36.99%), Postives = 80/146 (54.79%), Query Frame = 1

Query: 1   MEDANTLAADCIVICCCCQCLALQIILLLFLKLPWKLVRKTRE-FAKKRLRLREKEEKMV 60
           MED N  AADC+V+ CCC CL LQI + +FL LP KLV+ TR+ + K  +  R K   + 
Sbjct: 1   MEDLNAFAADCVVVSCCCNCLVLQIAIFIFLGLPQKLVKNTRKCYTKWGINRRIKRMGLC 60

Query: 61  GK-EKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWG---- 120
            +  +    +         M  E +G G   C+EE+E+V+++  + GEF FGSFWG    
Sbjct: 61  FECRENTEVDSEWRKESMMMSMEMEGFG---CIEEVEQVLEEFSKNGEFLFGSFWGQERV 120

Query: 121 NGNTSSGSCRDDLFSPTNV-QYQLIQ 140
             ++S  +C +D F    V +Y++I+
Sbjct: 121 QNSSSMSNCGNDNFDLRFVSRYEIIE 143

BLAST of Csa2G116260 vs. TAIR10
Match: AT1G26140.1 (AT1G26140.1 unknown protein)

HSP 1 Score: 79.3 bits (194), Expect = 2.1e-15
Identity = 42/119 (35.29%), Postives = 64/119 (53.78%), Query Frame = 1

Query: 2   EDANTLAADCIVICCCCQCLALQIILLLFLKLPWKLVRKTREFAKKRL-RLREKEEKMVG 61
           ED    AADC+V+ CCCQCL LQ+ + +F K+P KL +K ++F K+   +  +   + V 
Sbjct: 47  EDCGAFAADCVVLSCCCQCLVLQVSVFIFFKIPRKLAKKMKKFVKRICGKTLQPTMEDVK 106

Query: 62  KEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWGNGNTS 120
           +E   GN              E+G   S C E+I++++Q+L     F FGSFW + ++S
Sbjct: 107 EEHWSGNGF----------PFEEGSSRSICFEDIDRMLQELSMNKGFLFGSFWRHEDSS 155

BLAST of Csa2G116260 vs. NCBI nr
Match: gi|778668222|ref|XP_011649060.1| (PREDICTED: uncharacterized protein LOC105434576 [Cucumis sativus])

HSP 1 Score: 302.4 bits (773), Expect = 4.3e-79
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1

Query: 1   MEDANTLAADCIVICCCCQCLALQIILLLFLKLPWKLVRKTREFAKKRLRLREKEEKMVG 60
           MEDANTLAADCIVICCCCQCLALQIILLLFLKLPWKLVRKTREFAKKRLRLREKEEKMVG
Sbjct: 1   MEDANTLAADCIVICCCCQCLALQIILLLFLKLPWKLVRKTREFAKKRLRLREKEEKMVG 60

Query: 61  KEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWGNGNTSS 120
           KEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWGNGNTSS
Sbjct: 61  KEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWGNGNTSS 120

Query: 121 GSCRDDLFSPTNVQYQLIQVIPST 145
           GSCRDDLFSPTNVQYQLIQVIPST
Sbjct: 121 GSCRDDLFSPTNVQYQLIQVIPST 144

BLAST of Csa2G116260 vs. NCBI nr
Match: gi|659114694|ref|XP_008457185.1| (PREDICTED: uncharacterized protein LOC103496924 [Cucumis melo])

HSP 1 Score: 280.8 bits (717), Expect = 1.4e-72
Identity = 136/145 (93.79%), Postives = 139/145 (95.86%), Query Frame = 1

Query: 1   MEDANTLAADCIVICCCCQCLALQIILLLFLKLPWKLVRKTREFAKKRLRLREKEEKMVG 60
           MED NTLAADCIVICCCCQCLALQIILLL LKLP KLVRKTREFAKKRL +REKEEKMVG
Sbjct: 1   MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPCKLVRKTREFAKKRLGMREKEEKMVG 60

Query: 61  KEKGC-GNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWGNGNTS 120
           KEKGC GNE+RGISNGSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWGNGNT 
Sbjct: 61  KEKGCCGNELRGISNGSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWGNGNTR 120

Query: 121 SGSCRDDLFSPTNVQYQLIQVIPST 145
           SGSCRD+LFSPTNVQYQLIQVIPST
Sbjct: 121 SGSCRDELFSPTNVQYQLIQVIPST 145

BLAST of Csa2G116260 vs. NCBI nr
Match: gi|951003784|ref|XP_014507697.1| (PREDICTED: uncharacterized protein LOC106767343 [Vigna radiata var. radiata])

HSP 1 Score: 137.1 bits (344), Expect = 2.4e-29
Identity = 68/143 (47.55%), Postives = 91/143 (63.64%), Query Frame = 1

Query: 1   MEDANTLAADCIVICCCCQCLALQIILLLFLKLPWKLVRKTREFAKKRLRLREKEEKMVG 60
           ME+ N L ADC+VI CCCQCL LQI++ L LKLPWKL+RKTRE+AKK+LR R+  +  + 
Sbjct: 1   MEEWNMLGADCVVISCCCQCLLLQILVFLMLKLPWKLIRKTREYAKKKLRQRKGNDDKMK 60

Query: 61  KEKGCGNE--VRGISNGSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWGNGNT 120
            E GC  +  VR    G     + +G     CM+E+EK+M++L++KGEFGFGSFWG    
Sbjct: 61  IESGCYEDVLVRIDHEGEMAVRDGEGFDCGGCMDEVEKMMEELYQKGEFGFGSFWGR--- 120

Query: 121 SSGSCRDDLFSPTNVQYQLIQVI 142
               C      P  V+YQ+I  +
Sbjct: 121 -EEPCGKHYNHPNLVRYQVIDFV 139

BLAST of Csa2G116260 vs. NCBI nr
Match: gi|764574252|ref|XP_011462950.1| (PREDICTED: uncharacterized protein LOC105351122 [Fragaria vesca subsp. vesca])

HSP 1 Score: 136.7 bits (343), Expect = 3.2e-29
Identity = 67/149 (44.97%), Postives = 99/149 (66.44%), Query Frame = 1

Query: 1   MEDANTLAADCIVICCCCQCLALQIILLLFLKLPWKLVRKTREFAKKRLRLREKEEKMVG 60
           MED N LAADC+VI CCCQCL LQI + +F KLP KL++KTR +  K+L+ R+++  +V 
Sbjct: 23  MEDCNMLAADCVVISCCCQCLFLQITIFIFFKLPCKLIKKTRAYTMKKLQQRKRKGIVVE 82

Query: 61  KEK--GCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWGNGNT 120
            +    C N++  I  G  MR+ E+     CC+EE++KV+++++++G+FGFGSFWG G  
Sbjct: 83  SKTVYQCENDIVSIL-GESMRSMEEIHSCRCCIEEVDKVLEEMYQRGDFGFGSFWGGGEL 142

Query: 121 SSGSC----RDDLFSPTNVQYQLIQVIPS 144
                     DD F P+ V+YQLI++I S
Sbjct: 143 GFSPTHRLGNDDQFDPSFVRYQLIEMIDS 170

BLAST of Csa2G116260 vs. NCBI nr
Match: gi|920688014|gb|KOM31997.1| (hypothetical protein LR48_Vigan01g155300 [Vigna angularis])

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-28
Identity = 68/152 (44.74%), Postives = 95/152 (62.50%), Query Frame = 1

Query: 1   MEDANTLAADCIVICCCCQCLALQIILLLFLKLPWKLVRKTREFAKKRLRLREKEEKMVG 60
           ME+ N LAADC+VI CCCQCL LQI++ L LKLPWKL+RKTRE+AKK+LR R+  +    
Sbjct: 1   MEEWNMLAADCVVISCCCQCLLLQILVFLMLKLPWKLIRKTREYAKKKLRQRKGNDDKKK 60

Query: 61  KEKGCGNEVRGISNGSCMR-------NEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFW 120
            E  C  +V    +    R        + +G G   CM+E+EK+M++L++KGEFGFGSFW
Sbjct: 61  IESACYEDVLVRIHEQSFRIQGEMTVRDGEGFGCGGCMDEVEKIMEELYQKGEFGFGSFW 120

Query: 121 GNGNTSSGSCRDDLFS-PTNVQYQLIQVIPST 145
           G       +    + + P  V+YQ+I ++  T
Sbjct: 121 GREEPCGFAVPTKIHNDPNLVRYQVIDLLIKT 152

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LKX5_CUCSA3.0e-79100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G116260 PE=4 SV=1[more]
A0A0L9TNH6_PHAAN8.4e-2944.74Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g155300 PE=4 SV=1[more]
V7CHJ1_PHAVU5.4e-2847.74Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G281600g PE=4 SV=1[more]
W9QNZ2_9ROSA2.1e-2748.17Uncharacterized protein OS=Morus notabilis GN=L484_026566 PE=4 SV=1[more]
M5XZU9_PRUPE2.3e-2642.86Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012803mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G25597.13.1e-1936.99 unknown protein[more]
AT1G26140.12.1e-1535.29 unknown protein[more]
Match NameE-valueIdentityDescription
gi|778668222|ref|XP_011649060.1|4.3e-79100.00PREDICTED: uncharacterized protein LOC105434576 [Cucumis sativus][more]
gi|659114694|ref|XP_008457185.1|1.4e-7293.79PREDICTED: uncharacterized protein LOC103496924 [Cucumis melo][more]
gi|951003784|ref|XP_014507697.1|2.4e-2947.55PREDICTED: uncharacterized protein LOC106767343 [Vigna radiata var. radiata][more]
gi|764574252|ref|XP_011462950.1|3.2e-2944.97PREDICTED: uncharacterized protein LOC105351122 [Fragaria vesca subsp. vesca][more]
gi|920688014|gb|KOM31997.1|1.2e-2844.74hypothetical protein LR48_Vigan01g155300 [Vigna angularis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G116260.1Csa2G116260.1mRNA


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33264FAMILY NOT NAMEDcoord: 1..141
score: 2.7

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G116260Watermelon (Charleston Gray)cuwcgB154