Csa2G116260 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGACGCGAACACACTAGCAGCCGACTGCATTGTCATATGCTGCTGCTGTCAATGCCTGGCGTTGCAGATCATTCTCCTTTTGTTCCTCAAGCTTCCATGGAAACTCGTTCGAAAGACAAGAGAGTTTGCAAAGAAAAGGCTGAGACTGAGAGAAAAAGAGGAGAAGATGGTAGGGAAAGAAAAGGGTTGTGGGAATGAGGTTAGAGGAATTAGTAATGGAAGTTGTATGAGAAATGAAGAAAAGGGATTGGGTTTGAGTTGTTGTATGGAAGAGATTGAGAAGGTTATGCAGGATTTGCATGAGAAAGGAGAGTTTGGTTTTGGAAGCTTTTGGGGAAATGGTAATACAAGTTCAGGTTCCTGCAGAGATGATCTGTTTAGTCCTACAAATGTACAGTATCAATTAATTCAAGTAATTCCTTCCACATGA ATGGAAGACGCGAACACACTAGCAGCCGACTGCATTGTCATATGCTGCTGCTGTCAATGCCTGGCGTTGCAGATCATTCTCCTTTTGTTCCTCAAGCTTCCATGGAAACTCGTTCGAAAGACAAGAGAGTTTGCAAAGAAAAGGCTGAGACTGAGAGAAAAAGAGGAGAAGATGGTAGGGAAAGAAAAGGGTTGTGGGAATGAGGTTAGAGGAATTAGTAATGGAAGTTGTATGAGAAATGAAGAAAAGGGATTGGGTTTGAGTTGTTGTATGGAAGAGATTGAGAAGGTTATGCAGGATTTGCATGAGAAAGGAGAGTTTGGTTTTGGAAGCTTTTGGGGAAATGGTAATACAAGTTCAGGTTCCTGCAGAGATGATCTGTTTAGTCCTACAAATGTACAGTATCAATTAATTCAAGTAATTCCTTCCACATGA ATGGAAGACGCGAACACACTAGCAGCCGACTGCATTGTCATATGCTGCTGCTGTCAATGCCTGGCGTTGCAGATCATTCTCCTTTTGTTCCTCAAGCTTCCATGGAAACTCGTTCGAAAGACAAGAGAGTTTGCAAAGAAAAGGCTGAGACTGAGAGAAAAAGAGGAGAAGATGGTAGGGAAAGAAAAGGGTTGTGGGAATGAGGTTAGAGGAATTAGTAATGGAAGTTGTATGAGAAATGAAGAAAAGGGATTGGGTTTGAGTTGTTGTATGGAAGAGATTGAGAAGGTTATGCAGGATTTGCATGAGAAAGGAGAGTTTGGTTTTGGAAGCTTTTGGGGAAATGGTAATACAAGTTCAGGTTCCTGCAGAGATGATCTGTTTAGTCCTACAAATGTACAGTATCAATTAATTCAAGTAATTCCTTCCACATGA MEDANTLAADCIVICCCCQCLALQIILLLFLKLPWKLVRKTREFAKKRLRLREKEEKMVGKEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWGNGNTSSGSCRDDLFSPTNVQYQLIQVIPST*
BLAST of Csa2G116260 vs. TrEMBL
Match: A0A0A0LKX5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G116260 PE=4 SV=1) HSP 1 Score: 302.4 bits (773), Expect = 3.0e-79 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1
BLAST of Csa2G116260 vs. TrEMBL
Match: A0A0L9TNH6_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g155300 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 8.4e-29 Identity = 68/152 (44.74%), Postives = 95/152 (62.50%), Query Frame = 1
BLAST of Csa2G116260 vs. TrEMBL
Match: V7CHJ1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G281600g PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 5.4e-28 Identity = 74/155 (47.74%), Postives = 99/155 (63.87%), Query Frame = 1
BLAST of Csa2G116260 vs. TrEMBL
Match: W9QNZ2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026566 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 2.1e-27 Identity = 79/164 (48.17%), Postives = 102/164 (62.20%), Query Frame = 1
BLAST of Csa2G116260 vs. TrEMBL
Match: M5XZU9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012803mg PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 2.3e-26 Identity = 66/154 (42.86%), Postives = 93/154 (60.39%), Query Frame = 1
BLAST of Csa2G116260 vs. TAIR10
Match: AT3G25597.1 (AT3G25597.1 unknown protein) HSP 1 Score: 92.0 bits (227), Expect = 3.1e-19 Identity = 54/146 (36.99%), Postives = 80/146 (54.79%), Query Frame = 1
BLAST of Csa2G116260 vs. TAIR10
Match: AT1G26140.1 (AT1G26140.1 unknown protein) HSP 1 Score: 79.3 bits (194), Expect = 2.1e-15 Identity = 42/119 (35.29%), Postives = 64/119 (53.78%), Query Frame = 1
BLAST of Csa2G116260 vs. NCBI nr
Match: gi|778668222|ref|XP_011649060.1| (PREDICTED: uncharacterized protein LOC105434576 [Cucumis sativus]) HSP 1 Score: 302.4 bits (773), Expect = 4.3e-79 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1
BLAST of Csa2G116260 vs. NCBI nr
Match: gi|659114694|ref|XP_008457185.1| (PREDICTED: uncharacterized protein LOC103496924 [Cucumis melo]) HSP 1 Score: 280.8 bits (717), Expect = 1.4e-72 Identity = 136/145 (93.79%), Postives = 139/145 (95.86%), Query Frame = 1
BLAST of Csa2G116260 vs. NCBI nr
Match: gi|951003784|ref|XP_014507697.1| (PREDICTED: uncharacterized protein LOC106767343 [Vigna radiata var. radiata]) HSP 1 Score: 137.1 bits (344), Expect = 2.4e-29 Identity = 68/143 (47.55%), Postives = 91/143 (63.64%), Query Frame = 1
BLAST of Csa2G116260 vs. NCBI nr
Match: gi|764574252|ref|XP_011462950.1| (PREDICTED: uncharacterized protein LOC105351122 [Fragaria vesca subsp. vesca]) HSP 1 Score: 136.7 bits (343), Expect = 3.2e-29 Identity = 67/149 (44.97%), Postives = 99/149 (66.44%), Query Frame = 1
BLAST of Csa2G116260 vs. NCBI nr
Match: gi|920688014|gb|KOM31997.1| (hypothetical protein LR48_Vigan01g155300 [Vigna angularis]) HSP 1 Score: 134.8 bits (338), Expect = 1.2e-28 Identity = 68/152 (44.74%), Postives = 95/152 (62.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|