Csa2G100030 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAATTGAAGTGCAAAAGCGCAGCGATTTGAAAGCCGCCTGTGGACGCATGAGTGTACCGAAAGAGCAGGGTTCGAGGAACAAACTAAAACTTCACTCTTGCCGCTTCATTTCCTGATCAAGCGCCAATTTGCACCGTCGCATTTCCAAAATGCACATACTTCGTCTGCTGCCGATCCTTGCTTTTCTTCTTTTTTTTGCATTTTTCACCATCACTTCAGCTCAGGATTCCCATCTCGGATCTGCTCGTGTAGTATTTCAGGTTCTTCATTTCCTTCTCTATTAATCAAAATTTTAATCCACGTAGAGCTTTGGTTCTAGTTTTAAATGTTCCCTAATATATCAAACTACATTTTCGAATACCCAGACGAACTATGGCGATATTGAATTCGGTTTCTTCCCCAAGGTTGCTCCCAGAACCGTTGACCACATCTTCAAACTTGTTCGTCTCGGTTGTTATAACACCAACCATTTCTTTCGGGTATTACAACTGCAAATCTTTTTCTTTATGTATGTTTATGTGATTGTGTGGGGGAATATTGTGTGTGAGATAAGTTCATATTGTCAGGTTGACAAAGGGTTTGTGGCGCAAGTGGCAGATGTAGTGGGAGGAAGATTAGCTCCCATGAACGAGGAACAAAGAACGGAGGCTGAGAAGACTGTTGTTGGTGAATTTAGTGATGTTAAACACGTTAGAGGTATTCTTTCTATGGGGAGGTTAGTTCTTTCTACACTACACGCATAA ATGCACATACTTCGTCTGCTGCCGATCCTTGCTTTTCTTCTTTTTTTTGCATTTTTCACCATCACTTCAGCTCAGGATTCCCATCTCGGATCTGCTCGTGTAGTATTTCAGACGAACTATGGCGATATTGAATTCGGTTTCTTCCCCAAGGTTGCTCCCAGAACCGTTGACCACATCTTCAAACTTGTTCGTCTCGGTTGTTATAACACCAACCATTTCTTTCGGGTTGACAAAGGGTTTGTGGCGCAAGTGGCAGATGTAGTGGGAGGAAGATTAGCTCCCATGAACGAGGAACAAAGAACGGAGGCTGAGAAGACTGTTGTTGGTGAATTTAGTGATGTTAAACACGTTAGAGGTATTCTTTCTATGGGGAGGTTAGTTCTTTCTACACTACACGCATAA ATGCACATACTTCGTCTGCTGCCGATCCTTGCTTTTCTTCTTTTTTTTGCATTTTTCACCATCACTTCAGCTCAGGATTCCCATCTCGGATCTGCTCGTGTAGTATTTCAGACGAACTATGGCGATATTGAATTCGGTTTCTTCCCCAAGGTTGCTCCCAGAACCGTTGACCACATCTTCAAACTTGTTCGTCTCGGTTGTTATAACACCAACCATTTCTTTCGGGTTGACAAAGGGTTTGTGGCGCAAGTGGCAGATGTAGTGGGAGGAAGATTAGCTCCCATGAACGAGGAACAAAGAACGGAGGCTGAGAAGACTGTTGTTGGTGAATTTAGTGATGTTAAACACGTTAGAGGTATTCTTTCTATGGGGAGGTTAGTTCTTTCTACACTACACGCATAA MHILRLLPILAFLLFFAFFTITSAQDSHLGSARVVFQTNYGDIEFGFFPKVAPRTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRLAPMNEEQRTEAEKTVVGEFSDVKHVRGILSMGRLVLSTLHA*
BLAST of Csa2G100030 vs. Swiss-Prot
Match: CYP23_ARATH (Peptidyl-prolyl cis-trans isomerase CYP23 OS=Arabidopsis thaliana GN=CYP23 PE=2 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 9.3e-44 Identity = 90/115 (78.26%), Postives = 94/115 (81.74%), Query Frame = 1
BLAST of Csa2G100030 vs. TrEMBL
Match: A0A0A0LHF9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G100030 PE=4 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 1.0e-68 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1
BLAST of Csa2G100030 vs. TrEMBL
Match: B9HXT8_POPTR (Peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein OS=Populus trichocarpa GN=POPTR_0010s01660g PE=4 SV=2) HSP 1 Score: 194.9 bits (494), Expect = 6.3e-47 Identity = 95/111 (85.59%), Postives = 100/111 (90.09%), Query Frame = 1
BLAST of Csa2G100030 vs. TrEMBL
Match: A0A059BGJ2_EUCGR (Peptidyl-prolyl cis-trans isomerase OS=Eucalyptus grandis GN=EUGRSUZ_G02518 PE=3 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 6.3e-47 Identity = 95/117 (81.20%), Postives = 101/117 (86.32%), Query Frame = 1
BLAST of Csa2G100030 vs. TrEMBL
Match: A0A059BH44_EUCGR (Peptidyl-prolyl cis-trans isomerase OS=Eucalyptus grandis GN=EUGRSUZ_G02518 PE=3 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 6.3e-47 Identity = 95/117 (81.20%), Postives = 101/117 (86.32%), Query Frame = 1
BLAST of Csa2G100030 vs. TrEMBL
Match: A0A067GT37_CITSI (Peptidyl-prolyl cis-trans isomerase OS=Citrus sinensis GN=CISIN_1g027035mg PE=3 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 1.8e-46 Identity = 94/106 (88.68%), Postives = 98/106 (92.45%), Query Frame = 1
BLAST of Csa2G100030 vs. TAIR10
Match: AT1G26940.1 (AT1G26940.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 177.6 bits (449), Expect = 5.3e-45 Identity = 90/115 (78.26%), Postives = 94/115 (81.74%), Query Frame = 1
BLAST of Csa2G100030 vs. NCBI nr
Match: gi|700206251|gb|KGN61370.1| (hypothetical protein Csa_2G100030 [Cucumis sativus]) HSP 1 Score: 267.3 bits (682), Expect = 1.4e-68 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1
BLAST of Csa2G100030 vs. NCBI nr
Match: gi|659082197|ref|XP_008441716.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3 isoform X1 [Cucumis melo]) HSP 1 Score: 253.4 bits (646), Expect = 2.1e-64 Identity = 125/133 (93.98%), Postives = 130/133 (97.74%), Query Frame = 1
BLAST of Csa2G100030 vs. NCBI nr
Match: gi|449442287|ref|XP_004138913.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP23 [Cucumis sativus]) HSP 1 Score: 253.1 bits (645), Expect = 2.8e-64 Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 1
BLAST of Csa2G100030 vs. NCBI nr
Match: gi|659082199|ref|XP_008441717.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase-like 3 isoform X2 [Cucumis melo]) HSP 1 Score: 239.2 bits (609), Expect = 4.2e-60 Identity = 117/125 (93.60%), Postives = 122/125 (97.60%), Query Frame = 1
BLAST of Csa2G100030 vs. NCBI nr
Match: gi|470122577|ref|XP_004297317.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP23 [Fragaria vesca subsp. vesca]) HSP 1 Score: 201.8 bits (512), Expect = 7.4e-49 Identity = 101/119 (84.87%), Postives = 108/119 (90.76%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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