Csa2G081200 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G081200
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 6689744 .. 6690614 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTACTTGGAAGATAAGGGGGTGAGTGGAGGTTGTGAGGAACTTGAGCAGCTTGTCCTAGGAGGCCTTTCTTATTACGTAGGGATTGAGGCCGTGGGCATGCAACAAGATTTCATTGGAGTCCTCAGTCTTAAATGATCGTCTTCTCTCTGATCTTATGGCTTCCTCCTCTTCTTGTTTGTACCCTCATCACCCTTTTTATTTATCACTATATGGATGGTGATGAGGTCCCAACTTTCCATTTTGCCCCTCTTGTACTTATGTCCACAAGGCATCCTTACAAATGCTAGGATCTCTTCTTTCTTGGTGGGTCGACAGTTTCTCCTTCGACATGGTGTTTCTCTTTTCTTCTTTCTCAAACTCCTCGGCCACGCCCTCGACCACCTTTGTCTCCCACTCTCTTCCCTTGGTTCTTCTTCCAAGGACCCGAATTCCTTTCGTGGATCTTGCAGGGATCCTTGTTGTTAACCCTGTAAAATCAACATTAGGCGAGGAGGTGCTTTTTATTTGAAGCTCAAGATCCTCCTTCCTTACCTGGTTGTTTCGCTTCTTCCTTTTTCCTATCTTCTTATTCTTGTTACATAATCTTTTATTCTTGTATATCTTTTCACTTTCTTTTGCCCCTTCTTTCCATAATCTTTTATTCCTGAATTTCCTTCATCGATCTTTTCGTTCTTTCGCGCTTTCTATGTTTTTGGAACCTTATCACTCTAGGCACCGAAAAGGAGGAGTGGTTGTTACTCATGATGGGGTTGCTAGATGAGAAATTTTGTAAAGGAGACTATTTCTTGGTGAAAGATGGCAGGAATACGATGAAGAACATGGAAGAAGAGCTTTTTGGAATGGTAGTATTTTGGAGATTAATTGA

mRNA sequence

ATGGATTACTTGGAAGATAAGGGGGTGAGTGGAGGTTGTGAGGAACTTGAGCAGCTTGTCCTAGGAGGCCTTTCTTATTACGTAGGGATTGAGGCCGTGGGCATGCAACAAGATTTCATTGGAGTCCTCAGTCCCAACTTTCCATTTTGCCCCTCTTGTACTTATGTCCACAAGGCATCCTTACAAATGCTAGGATCTCTTCTTTCTTGGTGGGTCGACAGTTTCTCCTTCGACATGGTGTTTCTCTTTTCTTCTTTCTCAAACTCCTCGGCCACGCCCTCGACCACCTTTGTCTCCCACTCTCTTCCCTTGGTTCTTCTTCCAAGGACCCGAATTCCTTTCGTGGATCTTGCAGGGATCCTTGTTGTTAACCCTGTAAAATCAACATTAGGCGAGGAGGAATACGATGAAGAACATGGAAGAAGAGCTTTTTGGAATGGTAGTATTTTGGAGATTAATTGA

Coding sequence (CDS)

ATGGATTACTTGGAAGATAAGGGGGTGAGTGGAGGTTGTGAGGAACTTGAGCAGCTTGTCCTAGGAGGCCTTTCTTATTACGTAGGGATTGAGGCCGTGGGCATGCAACAAGATTTCATTGGAGTCCTCAGTCCCAACTTTCCATTTTGCCCCTCTTGTACTTATGTCCACAAGGCATCCTTACAAATGCTAGGATCTCTTCTTTCTTGGTGGGTCGACAGTTTCTCCTTCGACATGGTGTTTCTCTTTTCTTCTTTCTCAAACTCCTCGGCCACGCCCTCGACCACCTTTGTCTCCCACTCTCTTCCCTTGGTTCTTCTTCCAAGGACCCGAATTCCTTTCGTGGATCTTGCAGGGATCCTTGTTGTTAACCCTGTAAAATCAACATTAGGCGAGGAGGAATACGATGAAGAACATGGAAGAAGAGCTTTTTGGAATGGTAGTATTTTGGAGATTAATTGA

Protein sequence

MDYLEDKGVSGGCEELEQLVLGGLSYYVGIEAVGMQQDFIGVLSPNFPFCPSCTYVHKASLQMLGSLLSWWVDSFSFDMVFLFSSFSNSSATPSTTFVSHSLPLVLLPRTRIPFVDLAGILVVNPVKSTLGEEEYDEEHGRRAFWNGSILEIN*
Homology
[Close]
BLAST of Csa2G081200 vs. TrEMBL
Match: A0A0A0LMW9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G081200 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 1.1e-82
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1 

Query: 1   MDYLEDKGVSGGCEELEQLVLGGLSYYVGIEAVGMQQDFIGVLSPNFPFCPSCTYVHKAS 60
           MDYLEDKGVSGGCEELEQLVLGGLSYYVGIEAVGMQQDFIGVLSPNFPFCPSCTYVHKAS
Sbjct: 1   MDYLEDKGVSGGCEELEQLVLGGLSYYVGIEAVGMQQDFIGVLSPNFPFCPSCTYVHKAS 60

Query: 61  LQMLGSLLSWWVDSFSFDMVFLFSSFSNSSATPSTTFVSHSLPLVLLPRTRIPFVDLAGI 120
           LQMLGSLLSWWVDSFSFDMVFLFSSFSNSSATPSTTFVSHSLPLVLLPRTRIPFVDLAGI
Sbjct: 61  LQMLGSLLSWWVDSFSFDMVFLFSSFSNSSATPSTTFVSHSLPLVLLPRTRIPFVDLAGI 120

Query: 121 LVVNPVKSTLGEEEYDEEHGRRAFWNGSILEIN 154
           LVVNPVKSTLGEEEYDEEHGRRAFWNGSILEIN
Sbjct: 121 LVVNPVKSTLGEEEYDEEHGRRAFWNGSILEIN 153

[Close]
BLAST of Csa2G081200 vs. NCBI nr
Match: gi|700206202|gb|KGN61321.1| (hypothetical protein Csa_2G081200 [Cucumis sativus])

HSP 1 Score: 313.9 bits (803), Expect = 1.5e-82
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1 

Query: 1   MDYLEDKGVSGGCEELEQLVLGGLSYYVGIEAVGMQQDFIGVLSPNFPFCPSCTYVHKAS 60
           MDYLEDKGVSGGCEELEQLVLGGLSYYVGIEAVGMQQDFIGVLSPNFPFCPSCTYVHKAS
Sbjct: 1   MDYLEDKGVSGGCEELEQLVLGGLSYYVGIEAVGMQQDFIGVLSPNFPFCPSCTYVHKAS 60

Query: 61  LQMLGSLLSWWVDSFSFDMVFLFSSFSNSSATPSTTFVSHSLPLVLLPRTRIPFVDLAGI 120
           LQMLGSLLSWWVDSFSFDMVFLFSSFSNSSATPSTTFVSHSLPLVLLPRTRIPFVDLAGI
Sbjct: 61  LQMLGSLLSWWVDSFSFDMVFLFSSFSNSSATPSTTFVSHSLPLVLLPRTRIPFVDLAGI 120

Query: 121 LVVNPVKSTLGEEEYDEEHGRRAFWNGSILEIN 154
           LVVNPVKSTLGEEEYDEEHGRRAFWNGSILEIN
Sbjct: 121 LVVNPVKSTLGEEEYDEEHGRRAFWNGSILEIN 153

The following BLAST results are available for this feature:
BLAST of Csa2G081200 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LMW9_CUCSA1.1e-82100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G081200 PE=4 SV=1[more]
BLAST of Csa2G081200 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206202|gb|KGN61321.1|1.5e-82100.00hypothetical protein Csa_2G081200 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G081200.1Csa2G081200.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G081200Watermelon (97103) v2cuwmbB109
Csa2G081200Wax gourdcuwgoB139
Csa2G081200Cucumber (Gy14) v1cgycuB274
Csa2G081200Cucurbita maxima (Rimu)cmacuB165
Csa2G081200Cucurbita maxima (Rimu)cmacuB786
Csa2G081200Cucurbita moschata (Rifu)cmocuB150
Csa2G081200Cucurbita moschata (Rifu)cmocuB779
Csa2G081200Cucurbita moschata (Rifu)cmocuB787
Csa2G081200Melon (DHL92) v3.5.1cumeB142
Csa2G081200Watermelon (Charleston Gray)cuwcgB103
Csa2G081200Watermelon (97103) v1cuwmB156
Csa2G081200Cucurbita pepo (Zucchini)cpecuB098
Csa2G081200Cucurbita pepo (Zucchini)cpecuB811
Csa2G081200Bottle gourd (USVL1VR-Ls)culsiB098
Csa2G081200Cucumber (Gy14) v2cgybcuB056
Csa2G081200Melon (DHL92) v3.6.1cumedB129
Csa2G081200Melon (DHL92) v3.6.1cumedB135
Csa2G081200Silver-seed gourdcarcuB0514