Csa2G079630 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G079630
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 6535409 .. 6536295 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTTGAATGTTGCTCAGGGCTTTCTATTAATCATCAAAAATCAGAAATCATGGGTATATCTCTCTCCATCTGAACTCAGTGCTGTTGCTGATACCTATGGCTGCAAAGATGGCTGTGGGCAAAGTACCTATCTTGGCCTCCCCCTACATGGTAAACCGAAATCATACAGTTTTTGGCAGCCGGTTATTGAAAACTTGAAAATAAGCTTAGCTCTTGGACATCTTCTTTCATATCAAAGGGAGGTAGGCTTACCCTCGTCAAGCAACTTTGTGTAATCTACCAACTTACTATCTTTCCATCTACAAGATCTCTAATAAAGTTGCACAAGTGATTGAGAAACTTTATAGATACTTTCTCTGGAAAGGTAACAGCAAAGCTCACAAAATGCACATTGTCAATTGGAACGAAGTTATCTTTCCACAAGTCTCTGGAGATCTTGGGATTACTAGCCTCAAATTGAGAAACGGAAGCCTTCTTGCTAAATGGATCTTGTGCTTTAGAATGATGTTGGATGCCTTATGAGGAAAGTCATTGCTGCCAAGTATGGTATTTTCTGCTCTGGTAACAAAGCTGGAAATCATTCCATGTTCAGCGCAAGAAGTCCCTGGAAAGTTCTCTCATCTCTCCAAACATCTGTCGATCAATTTGTTGCTGCCACTCTAGGCAATGGTAACACTCTTGCCTTCTGGTTTGATAGTTAAATAACAACCCACTATCCTTGGCTTTTCCTAGACTCTATGAGCTTTCCCTTTCTAAGGATGCATTCGTAGCTGATATGTCTCATGCTTTGGATGCTGGCTTGAATCTTTGCTTTCGAAGAAATCTGAACGATGTGGAATTTGCTGAACGGCCAGCAACAAATCATCGAAAAGCTTCTGGTTAA

mRNA sequence

ATGAGTTTGAATGTTGCTCAGGGCTTTCTATTAATCATCAAAAATCAGAAATCATGGGTATATCTCTCTCCATCTGAACTCAGTGCTGTTGCTGATACCTATGGCTGCAAAGATGGCTGTGGGCAAAGTACCTATCTTGGCCTCCCCCTACATGGTAAACCGAAATCATACAGTTTTTGGCAGCCGGTTATTGAAAACTTGAAAATAAGCTTAGCTCTTGGACATCTTCTTTCATATCAAAGGGAGAATGATGTTGGATGCCTTATGAGGAAAGTCATTGCTGCCAAGTATGGTATTTTCTGCTCTGGTAACAAAGCTGGAAATCATTCCATGTTCAGCGCAAGAAGTCCCTGGAAATTAAATAACAACCCACTATCCTTGGCTTTTCCTAGACTCTATGAGCTTTCCCTTTCTAAGGATGCATTCGTAGCTGATATGTCTCATGCTTTGGATGCTGGCTTGAATCTTTGCTTTCGAAGAAATCTGAACGATGTGGAATTTGCTGAACGGCCAGCAACAAATCATCGAAAAGCTTCTGGTTAA

Coding sequence (CDS)

ATGAGTTTGAATGTTGCTCAGGGCTTTCTATTAATCATCAAAAATCAGAAATCATGGGTATATCTCTCTCCATCTGAACTCAGTGCTGTTGCTGATACCTATGGCTGCAAAGATGGCTGTGGGCAAAGTACCTATCTTGGCCTCCCCCTACATGGTAAACCGAAATCATACAGTTTTTGGCAGCCGGTTATTGAAAACTTGAAAATAAGCTTAGCTCTTGGACATCTTCTTTCATATCAAAGGGAGAATGATGTTGGATGCCTTATGAGGAAAGTCATTGCTGCCAAGTATGGTATTTTCTGCTCTGGTAACAAAGCTGGAAATCATTCCATGTTCAGCGCAAGAAGTCCCTGGAAATTAAATAACAACCCACTATCCTTGGCTTTTCCTAGACTCTATGAGCTTTCCCTTTCTAAGGATGCATTCGTAGCTGATATGTCTCATGCTTTGGATGCTGGCTTGAATCTTTGCTTTCGAAGAAATCTGAACGATGTGGAATTTGCTGAACGGCCAGCAACAAATCATCGAAAAGCTTCTGGTTAA

Protein sequence

MSLNVAQGFLLIIKNQKSWVYLSPSELSAVADTYGCKDGCGQSTYLGLPLHGKPKSYSFWQPVIENLKISLALGHLLSYQRENDVGCLMRKVIAAKYGIFCSGNKAGNHSMFSARSPWKLNNNPLSLAFPRLYELSLSKDAFVADMSHALDAGLNLCFRRNLNDVEFAERPATNHRKASG*
Homology
[Close]
BLAST of Csa2G079630 vs. TrEMBL
Match: A0A0A0LMV9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G079630 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 8.6e-100
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 1 

Query: 1   MSLNVAQGFLLIIKNQKSWVYLSPSELSAVADTYGCKDGCGQSTYLGLPLHGKPKSYSFW 60
           MSLNVAQGFLLIIKNQKSWVYLSPSELSAVADTYGCKDGCGQSTYLGLPLHGKPKSYSFW
Sbjct: 1   MSLNVAQGFLLIIKNQKSWVYLSPSELSAVADTYGCKDGCGQSTYLGLPLHGKPKSYSFW 60

Query: 61  QPVIENLKISLALGHLLSYQRENDVGCLMRKVIAAKYGIFCSGNKAGNHSMFSARSPWKL 120
           QPVIENLKISLALGHLLSYQRENDVGCLMRKVIAAKYGIFCSGNKAGNHSMFSARSPWKL
Sbjct: 61  QPVIENLKISLALGHLLSYQRENDVGCLMRKVIAAKYGIFCSGNKAGNHSMFSARSPWKL 120

Query: 121 NNNPLSLAFPRLYELSLSKDAFVADMSHALDAGLNLCFRRNLNDVEFAERPATNHRKASG 180
           NNNPLSLAFPRLYELSLSKDAFVADMSHALDAGLNLCFRRNLNDVEFAERPATNHRKASG
Sbjct: 121 NNNPLSLAFPRLYELSLSKDAFVADMSHALDAGLNLCFRRNLNDVEFAERPATNHRKASG 180

[Close]
BLAST of Csa2G079630 vs. NCBI nr
Match: gi|700206192|gb|KGN61311.1| (hypothetical protein Csa_2G079630 [Cucumis sativus])

HSP 1 Score: 370.9 bits (951), Expect = 1.2e-99
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 1 

Query: 1   MSLNVAQGFLLIIKNQKSWVYLSPSELSAVADTYGCKDGCGQSTYLGLPLHGKPKSYSFW 60
           MSLNVAQGFLLIIKNQKSWVYLSPSELSAVADTYGCKDGCGQSTYLGLPLHGKPKSYSFW
Sbjct: 1   MSLNVAQGFLLIIKNQKSWVYLSPSELSAVADTYGCKDGCGQSTYLGLPLHGKPKSYSFW 60

Query: 61  QPVIENLKISLALGHLLSYQRENDVGCLMRKVIAAKYGIFCSGNKAGNHSMFSARSPWKL 120
           QPVIENLKISLALGHLLSYQRENDVGCLMRKVIAAKYGIFCSGNKAGNHSMFSARSPWKL
Sbjct: 61  QPVIENLKISLALGHLLSYQRENDVGCLMRKVIAAKYGIFCSGNKAGNHSMFSARSPWKL 120

Query: 121 NNNPLSLAFPRLYELSLSKDAFVADMSHALDAGLNLCFRRNLNDVEFAERPATNHRKASG 180
           NNNPLSLAFPRLYELSLSKDAFVADMSHALDAGLNLCFRRNLNDVEFAERPATNHRKASG
Sbjct: 121 NNNPLSLAFPRLYELSLSKDAFVADMSHALDAGLNLCFRRNLNDVEFAERPATNHRKASG 180

The following BLAST results are available for this feature:
BLAST of Csa2G079630 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LMV9_CUCSA8.6e-100100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G079630 PE=4 SV=1[more]
BLAST of Csa2G079630 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206192|gb|KGN61311.1|1.2e-99100.00hypothetical protein Csa_2G079630 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0033554 cellular response to stress
biological_process GO:0033674 positive regulation of kinase activity
biological_process GO:0015031 protein transport
biological_process GO:0045859 regulation of protein kinase activity
biological_process GO:0006417 regulation of translation
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0019901 protein kinase binding
molecular_function GO:0019887 protein kinase regulator activity
molecular_function GO:0043022 ribosome binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G079630.1Csa2G079630.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G079630CSPI02G07670Wild cucumber (PI 183967)cpicuB065
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G079630Cucurbita moschata (Rifu)cmocuB150
Csa2G079630Cucurbita moschata (Rifu)cmocuB779
Csa2G079630Cucurbita moschata (Rifu)cmocuB787
Csa2G079630Melon (DHL92) v3.5.1cumeB142
Csa2G079630Watermelon (Charleston Gray)cuwcgB103
Csa2G079630Watermelon (97103) v1cuwmB156
Csa2G079630Cucurbita pepo (Zucchini)cpecuB098
Csa2G079630Cucurbita pepo (Zucchini)cpecuB811
Csa2G079630Bottle gourd (USVL1VR-Ls)culsiB098
Csa2G079630Cucumber (Gy14) v2cgybcuB056
Csa2G079630Melon (DHL92) v3.6.1cumedB129
Csa2G079630Melon (DHL92) v3.6.1cumedB135
Csa2G079630Silver-seed gourdcarcuB0514
Csa2G079630Watermelon (97103) v2cuwmbB109
Csa2G079630Wax gourdcuwgoB139
Csa2G079630Cucumber (Gy14) v1cgycuB274
Csa2G079630Cucurbita maxima (Rimu)cmacuB165
Csa2G079630Cucurbita maxima (Rimu)cmacuB786