Csa2G079110 (gene) Cucumber (Chinese Long) v2

NameCsa2G079110
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 6484988 .. 6485257 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAATTGATTCATCCCCTTCAAGGCAAGAACCTAAAAACTTCCTTGCCTTGGTACAATTTGACCCAATTAGCCAAACTGAATTGCCTGGTCAAGAAGATTCAATTCAGAAGGAATTTCAAGACCCTCTAATTGATCTTAACGCGTCCAGTGATGATGCATTCATCAAGCAAAAAAATGGGGCAGATGGCCCAAACCTATTCTCAGAAAGGAATAAAGTTCCTGAGGAGGTAATTAATGATCCATACTTCACATGGAGAAAGAAATAA

mRNA sequence

ATGCAAATTGATTCATCCCCTTCAAGGCAAGAACCTAAAAACTTCCTTGCCTTGGTACAATTTGACCCAATTAGCCAAACTGAATTGCCTGGTCAAGAAGATTCAATTCAGAAGGAATTTCAAGACCCTCTAATTGATCTTAACGCGTCCAGTGATGATGCATTCATCAAGCAAAAAAATGGGGCAGATGGCCCAAACCTATTCTCAGAAAGGAATAAAGTTCCTGAGGAGGTAATTAATGATCCATACTTCACATGGAGAAAGAAATAA

Coding sequence (CDS)

ATGCAAATTGATTCATCCCCTTCAAGGCAAGAACCTAAAAACTTCCTTGCCTTGGTACAATTTGACCCAATTAGCCAAACTGAATTGCCTGGTCAAGAAGATTCAATTCAGAAGGAATTTCAAGACCCTCTAATTGATCTTAACGCGTCCAGTGATGATGCATTCATCAAGCAAAAAAATGGGGCAGATGGCCCAAACCTATTCTCAGAAAGGAATAAAGTTCCTGAGGAGGTAATTAATGATCCATACTTCACATGGAGAAAGAAATAA

Protein sequence

MQIDSSPSRQEPKNFLALVQFDPISQTELPGQEDSIQKEFQDPLIDLNASSDDAFIKQKNGADGPNLFSERNKVPEEVINDPYFTWRKK*
BLAST of Csa2G079110 vs. TrEMBL
Match: A0A0A0LHN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G079110 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 7.5e-44
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 1

Query: 1  MQIDSSPSRQEPKNFLALVQFDPISQTELPGQEDSIQKEFQDPLIDLNASSDDAFIKQKN 60
          MQIDSSPSRQEPKNFLALVQFDPISQTELPGQEDSIQKEFQDPLIDLNASSDDAFIKQKN
Sbjct: 1  MQIDSSPSRQEPKNFLALVQFDPISQTELPGQEDSIQKEFQDPLIDLNASSDDAFIKQKN 60

Query: 61 GADGPNLFSERNKVPEEVINDPYFTWRKK 90
          GADGPNLFSERNKVPEEVINDPYFTWRKK
Sbjct: 61 GADGPNLFSERNKVPEEVINDPYFTWRKK 89

BLAST of Csa2G079110 vs. NCBI nr
Match: gi|700206189|gb|KGN61308.1| (hypothetical protein Csa_2G079110 [Cucumis sativus])

HSP 1 Score: 184.1 bits (466), Expect = 1.1e-43
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 1

Query: 1  MQIDSSPSRQEPKNFLALVQFDPISQTELPGQEDSIQKEFQDPLIDLNASSDDAFIKQKN 60
          MQIDSSPSRQEPKNFLALVQFDPISQTELPGQEDSIQKEFQDPLIDLNASSDDAFIKQKN
Sbjct: 1  MQIDSSPSRQEPKNFLALVQFDPISQTELPGQEDSIQKEFQDPLIDLNASSDDAFIKQKN 60

Query: 61 GADGPNLFSERNKVPEEVINDPYFTWRKK 90
          GADGPNLFSERNKVPEEVINDPYFTWRKK
Sbjct: 61 GADGPNLFSERNKVPEEVINDPYFTWRKK 89

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LHN2_CUCSA7.5e-44100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G079110 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700206189|gb|KGN61308.1|1.1e-43100.00hypothetical protein Csa_2G079110 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G079110.1Csa2G079110.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G079110CSPI02G07640Wild cucumber (PI 183967)cpicuB065
The following gene(s) are paralogous to this gene:

None