Csa2G070910 (gene) Cucumber (Chinese Long) v2

NameCsa2G070910
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 5555545 .. 5555834 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAAGGTGTTGAAAGGGTCGGACTGCGACGTTGTTGCCATCCCTTTGTGGGGTGTTTGTAATTACAGAAACCTTTTTAAGCAAAGCGGAAATTCCCTGGAGCGCAATATTTTGCTGAACAAGATCTCTTTTCATGTGGAGGAGTTTTCTGGTGTTGGTGGGGATGGCCAGGCATCGTTGAGGAGGGAGAGCCTGAGGAGTCATGAGATCTGGGTGCCGCCTGATATATGTTATTGTTTTTGGAAGTTTTACTTCTGATGTTATGTGGAACAATGTTGAGGAGGTTC

mRNA sequence

ATGATCAAGGTGTTGAAAGGGTCGGACTGCGACGTTGTTGCCATCCCTTTGTGGGGTGTTTGTAATTACAGAAACCTTTTTAAGCAAAGCGGAAATTCCCTGGAGCGCAATATTTTGCTGAACAAGATCTCTTTTCATGTGGAGGAGTTTTCTGGTGTTGGTGGGGATGGCCAGGCATCGTTGAGGAGGGAGAGCCTGAGGAGTCATGAGATCTGGGTGCCGCCTGATATATGTTATTGTTTTTGGAAGTTTTACTTCTGA

Coding sequence (CDS)

ATGATCAAGGTGTTGAAAGGGTCGGACTGCGACGTTGTTGCCATCCCTTTGTGGGGTGTTTGTAATTACAGAAACCTTTTTAAGCAAAGCGGAAATTCCCTGGAGCGCAATATTTTGCTGAACAAGATCTCTTTTCATGTGGAGGAGTTTTCTGGTGTTGGTGGGGATGGCCAGGCATCGTTGAGGAGGGAGAGCCTGAGGAGTCATGAGATCTGGGTGCCGCCTGATATATGTTATTGTTTTTGGAAGTTTTACTTCTGA

Protein sequence

MIKVLKGSDCDVVAIPLWGVCNYRNLFKQSGNSLERNILLNKISFHVEEFSGVGGDGQASLRRESLRSHEIWVPPDICYCFWKFYF*
BLAST of Csa2G070910 vs. TrEMBL
Match: A0A0A0LGZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G070910 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.1e-44
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1

Query: 1  MIKVLKGSDCDVVAIPLWGVCNYRNLFKQSGNSLERNILLNKISFHVEEFSGVGGDGQAS 60
          MIKVLKGSDCDVVAIPLWGVCNYRNLFKQSGNSLERNILLNKISFHVEEFSGVGGDGQAS
Sbjct: 1  MIKVLKGSDCDVVAIPLWGVCNYRNLFKQSGNSLERNILLNKISFHVEEFSGVGGDGQAS 60

Query: 61 LRRESLRSHEIWVPPDICYCFWKFYF 87
          LRRESLRSHEIWVPPDICYCFWKFYF
Sbjct: 61 LRRESLRSHEIWVPPDICYCFWKFYF 86

BLAST of Csa2G070910 vs. NCBI nr
Match: gi|700206106|gb|KGN61225.1| (hypothetical protein Csa_2G070910 [Cucumis sativus])

HSP 1 Score: 186.8 bits (473), Expect = 1.6e-44
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1

Query: 1  MIKVLKGSDCDVVAIPLWGVCNYRNLFKQSGNSLERNILLNKISFHVEEFSGVGGDGQAS 60
          MIKVLKGSDCDVVAIPLWGVCNYRNLFKQSGNSLERNILLNKISFHVEEFSGVGGDGQAS
Sbjct: 1  MIKVLKGSDCDVVAIPLWGVCNYRNLFKQSGNSLERNILLNKISFHVEEFSGVGGDGQAS 60

Query: 61 LRRESLRSHEIWVPPDICYCFWKFYF 87
          LRRESLRSHEIWVPPDICYCFWKFYF
Sbjct: 61 LRRESLRSHEIWVPPDICYCFWKFYF 86

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LGZ4_CUCSA1.1e-44100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G070910 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700206106|gb|KGN61225.1|1.6e-44100.00hypothetical protein Csa_2G070910 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G070910.1Csa2G070910.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G070910CSPI02G06880Wild cucumber (PI 183967)cpicuB065
The following gene(s) are paralogous to this gene:

None