Csa2G061610 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G061610
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 5021534 .. 5022077 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTCGGATACAAATACGAGCAGCAAGAAGAAAGTAGGAGCGACAAGAAAGAGATCCATGGGATCCTTGCATGTTCAAAGAGAGTTCTCTATGAACATGCAAGGAAGGGTTTCAGAGGCAAAGGGTGGAAATCCAACCTTAAACAAAACCAACGACAGATAAGGAGAAGGGACTCGAAGGCAAGAGGTAGAAATCGAGCATTCAATGAAACCAATGACGGAGAAGGAGAGGTGTTTCAGATTTGGGATTCAGAGAAGGCATTCAAAATATGGAAAAGTAGACGAAAACAAAGAGATAAGATTTGGTGAAGGGACGAAGGATTTGGAGAAGGGAGAAGGATTACGAGGAGGGAGAAGGATTACGCGCGGTAGAAAGGAGTGGGAGGGGGAGTGTTAAACAGTAGAAAGGAGATTGGCCAAGGATTACAAGAAGGATCACGCAAAGAAGAAAGGATTATGGAAATCCTAAAGCTAGGATTTTCATTATCTCGGCCCCAAACGTGGAGTGGGCTACCCTTTTAGTTTGAGTCCCAAACATGCGCACC

mRNA sequence

ATGAAACCAATGACGGAGAAGGAGAGGTGTTTCAGATTTGGGATTCAGAGAAGGCATTCAAAATATGGAAAAGTAGACGAAAACAAAGAGATAAGATTTGGTGAAGGGACGAAGGATTTGGAGAAGGGAGAAGGATTACGAGGAGGGAGAAGGATTACGCGCGGTAGAAAGGAGTGGGAGGGGGAGTGTTAA

Coding sequence (CDS)

ATGAAACCAATGACGGAGAAGGAGAGGTGTTTCAGATTTGGGATTCAGAGAAGGCATTCAAAATATGGAAAAGTAGACGAAAACAAAGAGATAAGATTTGGTGAAGGGACGAAGGATTTGGAGAAGGGAGAAGGATTACGAGGAGGGAGAAGGATTACGCGCGGTAGAAAGGAGTGGGAGGGGGAGTGTTAA

Protein sequence

MKPMTEKERCFRFGIQRRHSKYGKVDENKEIRFGEGTKDLEKGEGLRGGRRITRGRKEWEGEC*
Homology
[Close]
BLAST of Csa2G061610 vs. TrEMBL
Match: A0A0A0LJD0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G061610 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 5.7e-30
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1 

Query: 1  MKPMTEKERCFRFGIQRRHSKYGKVDENKEIRFGEGTKDLEKGEGLRGGRRITRGRKEWE 60
          MKPMTEKERCFRFGIQRRHSKYGKVDENKEIRFGEGTKDLEKGEGLRGGRRITRGRKEWE
Sbjct: 1  MKPMTEKERCFRFGIQRRHSKYGKVDENKEIRFGEGTKDLEKGEGLRGGRRITRGRKEWE 60

Query: 61 GEC 64
          GEC
Sbjct: 61 GEC 63

[Close]
BLAST of Csa2G061610 vs. NCBI nr
Match: gi|700206065|gb|KGN61184.1| (hypothetical protein Csa_2G061610 [Cucumis sativus])

HSP 1 Score: 137.5 bits (345), Expect = 8.2e-30
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1 

Query: 1  MKPMTEKERCFRFGIQRRHSKYGKVDENKEIRFGEGTKDLEKGEGLRGGRRITRGRKEWE 60
          MKPMTEKERCFRFGIQRRHSKYGKVDENKEIRFGEGTKDLEKGEGLRGGRRITRGRKEWE
Sbjct: 1  MKPMTEKERCFRFGIQRRHSKYGKVDENKEIRFGEGTKDLEKGEGLRGGRRITRGRKEWE 60

Query: 61 GEC 64
          GEC
Sbjct: 61 GEC 63

The following BLAST results are available for this feature:
BLAST of Csa2G061610 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJD0_CUCSA5.7e-30100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G061610 PE=4 SV=1[more]
BLAST of Csa2G061610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206065|gb|KGN61184.1|8.2e-30100.00hypothetical protein Csa_2G061610 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G061610.1Csa2G061610.1mRNA